RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W PRP21P32524 280 aaPredicted RBP3.32□□□□□ -1.88
SWD2YKL018W UTR4P32626 227 aa3.32□□□□□ -1.88
SWD2YKL018W PFF1P38244 976 aa3.32□□□□□ -1.88
SWD2YKL018W GDT1P38301 280 aaPredicted RBP3.32□□□□□ -1.88
SWD2YKL018W YTA12P40341 825 aa3.32□□□□□ -1.88
SWD2YKL018W EPL1P43572 832 aa3.32□□□□□ -1.88
SWD2YKL018W TOM22P49334 152 aa3.32□□□□□ -1.88
SWD2YKL018W MLC1P53141 149 aa3.32□□□□□ -1.88
SWD2YKL018W RBA50Q04418 439 aa3.32□□□□□ -1.88
SWD2YKL018W HSP31Q04432 237 aa3.32□□□□□ -1.88
SWD2YKL018W TFB5Q3E7C1 72 aaPredicted RBP3.32□□□□□ -1.88
SWD2YKL018W ECM5Q03214 1411 aa3.31□□□□□ -1.88
SWD2YKL018W SCEIP03882 235 aa3.31□□□□□ -1.88
SWD2YKL018W GDH1P07262 454 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W MTF1P14908 341 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W YCR007CP25354 239 aa3.31□□□□□ -1.88
SWD2YKL018W RIM1P32445 135 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W APE2P32454 952 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W PTR2P32901 601 aa3.31□□□□□ -1.88
SWD2YKL018W RRN10P38204 145 aa3.31□□□□□ -1.88
SWD2YKL018W SIF2P38262 535 aa3.31□□□□□ -1.88
SWD2YKL018W YSW1P38280 609 aa3.31□□□□□ -1.88
SWD2YKL018W CCT2P39076 527 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W SCD6P45978 349 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88 RIP-Chip
SWD2YKL018W YIF1P53845 314 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W SAM50P53969 484 aa3.31□□□□□ -1.88
SWD2YKL018W SLD5Q03406 294 aa3.31□□□□□ -1.88
SWD2YKL018W YDR387CQ04162 555 aa3.31□□□□□ -1.88
SWD2YKL018W RNH1Q04740 348 aa3.31□□□□□ -1.88
SWD2YKL018W MDM30Q05930 598 aa3.31□□□□□ -1.88
SWD2YKL018W RKM1Q08961 583 aaPredicted RBP3.31□□□□□ -1.88
SWD2YKL018W LSP1Q12230 341 aaKnown RBP3.31□□□□□ -1.88
SWD2YKL018W RRD2Q12461 358 aa3.31□□□□□ -1.88
SWD2YKL018W SET6Q12529 373 aa3.31□□□□□ -1.88
SWD2YKL018W MRS3P10566 314 aa3.3□□□□□ -1.88
SWD2YKL018W CBS2P14905 389 aa3.3□□□□□ -1.88
SWD2YKL018W EXO70P19658 623 aa3.3□□□□□ -1.88
SWD2YKL018W NDC1P32500 655 aa3.3□□□□□ -1.88
SWD2YKL018W FRE1P32791 686 aa3.3□□□□□ -1.88
SWD2YKL018W SOR1P35497 357 aaKnown RBP3.3□□□□□ -1.88
SWD2YKL018W UIP5P36137 443 aa3.3□□□□□ -1.88
SWD2YKL018W ASC1P38011 319 aaKnown RBP3.3□□□□□ -1.88
SWD2YKL018W ADH5P38113 351 aaKnown RBP3.3□□□□□ -1.88
SWD2YKL018W OSH3P38713 996 aaKnown RBP3.3□□□□□ -1.88
SWD2YKL018W RRF1P38771 230 aa3.3□□□□□ -1.88
SWD2YKL018W FAU1P40099 211 aa3.3□□□□□ -1.88
SWD2YKL018W CSM2P40465 213 aa3.3□□□□□ -1.88
SWD2YKL018W YJL213WP40896 331 aa3.3□□□□□ -1.88
SWD2YKL018W SAS2P40963 338 aa3.3□□□□□ -1.88
SWD2YKL018W YJR011CP47086 261 aaPredicted RBP3.3□□□□□ -1.88
SWD2YKL018W PIB2P53191 635 aa3.3□□□□□ -1.88
SWD2YKL018W SOR2Q07786 357 aa3.3□□□□□ -1.88
SWD2YKL018W ARO3P14843 370 aaKnown RBP3.29□□□□□ -1.88
SWD2YKL018W SEC63P14906 663 aa3.29□□□□□ -1.88
SWD2YKL018W ECM15P35195 104 aa3.29□□□□□ -1.88
SWD2YKL018W MRPL4P36517 319 aa3.29□□□□□ -1.88
SWD2YKL018W OLA1P38219 394 aaKnown RBP3.29□□□□□ -1.88
SWD2YKL018W RRP4P38792 359 aaKnown RBP3.29□□□□□ -1.88
SWD2YKL018W PCF11P39081 626 aaPredicted RBP3.29□□□□□ -1.88
SWD2YKL018W RTT101P47050 842 aa3.29□□□□□ -1.88
SWD2YKL018W MDE1P47095 244 aa3.29□□□□□ -1.88
SWD2YKL018W PCP1P53259 346 aa3.29□□□□□ -1.88
SWD2YKL018W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
SWD2YKL018W ADA2Q02336 434 aa3.29□□□□□ -1.88
SWD2YKL018W RPN9Q04062 393 aaKnown RBP3.29□□□□□ -1.88
SWD2YKL018W DBP9Q06218 594 aaKnown RBP3.29□□□□□ -1.88
SWD2YKL018W YLH47Q06493 454 aa3.29□□□□□ -1.88
SWD2YKL018W THI20Q08224 551 aa3.29□□□□□ -1.88
SWD2YKL018W CLP1Q08685 445 aaPredicted RBP3.29□□□□□ -1.88
SWD2YKL018W RKM5Q12367 367 aa3.29□□□□□ -1.88
SWD2YKL018W HIS4P00815 799 aaKnown RBP3.28□□□□□ -1.88
SWD2YKL018W RPL15AP05748 204 aaKnown RBP3.28□□□□□ -1.88
SWD2YKL018W GEX1P25596 615 aa3.28□□□□□ -1.88
SWD2YKL018W BUB3P26449 341 aa3.28□□□□□ -1.88
SWD2YKL018W PHO91P27514 894 aa3.28□□□□□ -1.88
SWD2YKL018W RSM22P36056 628 aa3.28□□□□□ -1.88
SWD2YKL018W PCA1P38360 1216 aa3.28□□□□□ -1.88
SWD2YKL018W RFC3P38629 340 aa3.28□□□□□ -1.88
SWD2YKL018W MLH1P38920 769 aa3.28□□□□□ -1.88
SWD2YKL018W RPH1P39956 796 aa3.28□□□□□ -1.88
SWD2YKL018W CHS6P40955 746 aa3.28□□□□□ -1.88
SWD2YKL018W ELP2P42935 788 aa3.28□□□□□ -1.88
SWD2YKL018W ROG1P53118 685 aa3.28□□□□□ -1.88
SWD2YKL018W YMR111CQ04461 462 aaPredicted RBP3.28□□□□□ -1.88
SWD2YKL018W REX4Q08237 289 aa3.28□□□□□ -1.88
SWD2YKL018W TY1B-DR4Q07793 1604 aa3.28□□□□□ -1.88
SWD2YKL018W ADE4P04046 510 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W RPC40P07703 335 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W DAP2P18962 818 aa3.27□□□□□ -1.89
SWD2YKL018W AGA1P32323 725 aa3.27□□□□□ -1.89
SWD2YKL018W ECM25P32525 599 aa3.27□□□□□ -1.89
SWD2YKL018W YEL043WP32618 956 aa3.27□□□□□ -1.89
SWD2YKL018W RIB7P33312 244 aa3.27□□□□□ -1.89
SWD2YKL018W VPS52P39904 641 aa3.27□□□□□ -1.89
SWD2YKL018W ISC1P40015 477 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W YIL089WP40500 205 aa3.27□□□□□ -1.89
SWD2YKL018W TRS85P46944 698 aa3.27□□□□□ -1.89
SWD2YKL018W FYV8P46949 817 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W PHO86P46956 311 aa3.27□□□□□ -1.89
SWD2YKL018W YDL186WP48568 277 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms