RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W AYT1Q12226 474 aa2.19□□□□□ -2.06
RPL40AYIL148W YDR061WQ12298 539 aa2.19□□□□□ -2.06
RPL40AYIL148W SNU66Q12420 587 aaPredicted RBP2.19□□□□□ -2.06
RPL40AYIL148W ISN1Q99312 450 aa2.19□□□□□ -2.06
RPL40AYIL148W SPT7P35177 1332 aa2.18□□□□□ -2.06
RPL40AYIL148W CDC21P06785 304 aa2.18□□□□□ -2.06
RPL40AYIL148W GDH1P07262 454 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W RAD57P25301 460 aa2.18□□□□□ -2.06
RPL40AYIL148W SPS22P25380 463 aa2.18□□□□□ -2.06
RPL40AYIL148W SEC1P30619 724 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W HSP104P31539 908 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W SMY1P32364 656 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W CYS4P32582 507 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W MRP4P32902 394 aa2.18□□□□□ -2.06
RPL40AYIL148W FMP46P36141 133 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W ATP3P38077 311 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W RIB5P38145 238 aa2.18□□□□□ -2.06
RPL40AYIL148W FAD1P38913 306 aa2.18□□□□□ -2.06
RPL40AYIL148W HAT2P39984 401 aa2.18□□□□□ -2.06
RPL40AYIL148W VHS2P40463 436 aa2.18□□□□□ -2.06
RPL40AYIL148W RPR2P40571 144 aa2.18□□□□□ -2.06
RPL40AYIL148W MKT1P40850 830 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W PHO86P46956 311 aa2.18□□□□□ -2.06
RPL40AYIL148W EOS1P53938 366 aa2.18□□□□□ -2.06
RPL40AYIL148W PEX25Q02969 394 aa2.18□□□□□ -2.06
RPL40AYIL148W RSN1Q03516 953 aa2.18□□□□□ -2.06
RPL40AYIL148W TAF12Q03761 539 aa2.18□□□□□ -2.06
RPL40AYIL148W NDE2Q07500 545 aa2.18□□□□□ -2.06
RPL40AYIL148W RKM1Q08961 583 aaPredicted RBP2.18□□□□□ -2.06
RPL40AYIL148W YPR022CQ12139 1133 aa2.18□□□□□ -2.06
RPL40AYIL148W RPN5Q12250 445 aaKnown RBP2.18□□□□□ -2.06
RPL40AYIL148W MRS3P10566 314 aa2.17□□□□□ -2.06
RPL40AYIL148W MCK1P21965 375 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W LSB5P25369 354 aa2.17□□□□□ -2.06
RPL40AYIL148W PUT3P25502 979 aaPredicted RBP2.17□□□□□ -2.06
RPL40AYIL148W YCR022CP25620 114 aa2.17□□□□□ -2.06
RPL40AYIL148W TIP1P27654 210 aaPredicted RBP2.17□□□□□ -2.06
RPL40AYIL148W VPH1P32563 840 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W ASC1P38011 319 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W KAP104P38217 918 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W RXT2P38255 430 aa2.17□□□□□ -2.06
RPL40AYIL148W DHH1P39517 506 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W MST28P39552 234 aa2.17□□□□□ -2.06
RPL40AYIL148W YER079WP40052 210 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W WWM1P43582 211 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W YNR048WP53740 393 aa2.17□□□□□ -2.06
RPL40AYIL148W GOR1P53839 350 aa2.17□□□□□ -2.06
RPL40AYIL148W PPM1Q04081 328 aa2.17□□□□□ -2.06
RPL40AYIL148W SMA2Q04658 369 aa2.17□□□□□ -2.06
RPL40AYIL148W HCR1Q05775 265 aaKnown RBP2.17□□□□□ -2.06
RPL40AYIL148W NDD1Q08887 554 aa2.17□□□□□ -2.06
RPL40AYIL148W RUP1Q12242 671 aa2.17□□□□□ -2.06
RPL40AYIL148W YLR108CQ12259 485 aa2.17□□□□□ -2.06
RPL40AYIL148W ADE4P04046 510 aaKnown RBP2.16□□□□□ -2.06
RPL40AYIL148W DST1P07273 309 aa2.16□□□□□ -2.06
RPL40AYIL148W SEC63P14906 663 aa2.16□□□□□ -2.06
RPL40AYIL148W SLY1P22213 666 aa2.16□□□□□ -2.06
RPL40AYIL148W SNT1P25357 1226 aa2.16□□□□□ -2.06
RPL40AYIL148W PHO91P27514 894 aa2.16□□□□□ -2.06
RPL40AYIL148W COX13P32799 129 aa2.16□□□□□ -2.06
RPL40AYIL148W KKQ8P36004 724 aa2.16□□□□□ -2.06
RPL40AYIL148W RFC3P38629 340 aa2.16□□□□□ -2.06
RPL40AYIL148W DED81P38707 554 aaKnown RBP2.16□□□□□ -2.06
RPL40AYIL148W RRP4P38792 359 aaKnown RBP2.16□□□□□ -2.06
RPL40AYIL148W SER3P40054 469 aa2.16□□□□□ -2.06
RPL40AYIL148W EFM4P40516 257 aa2.16□□□□□ -2.06
RPL40AYIL148W EPL1P43572 832 aa2.16□□□□□ -2.06
RPL40AYIL148W YDL186WP48568 277 aa2.16□□□□□ -2.06
RPL40AYIL148W PHB2P50085 310 aa2.16□□□□□ -2.06
RPL40AYIL148W WSC2P53832 503 aa2.16□□□□□ -2.06
RPL40AYIL148W GPI15P53961 229 aa2.16□□□□□ -2.06
RPL40AYIL148W MMT1Q03218 510 aa2.16□□□□□ -2.06
RPL40AYIL148W YMR181CQ03231 154 aa2.16□□□□□ -2.06
RPL40AYIL148W PRP42Q03776 544 aaKnown RBP2.16□□□□□ -2.06
RPL40AYIL148W RRN11Q04712 507 aa2.16□□□□□ -2.06
RPL40AYIL148W MDM30Q05930 598 aa2.16□□□□□ -2.06
RPL40AYIL148W SKI7Q08491 747 aaPredicted RBP2.16□□□□□ -2.06
RPL40AYIL148W HEM2P05373 342 aa2.15□□□□□ -2.07
RPL40AYIL148W RPL1AP0CX43 217 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W RPL1BP0CX44 217 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W OPI1P21957 404 aa2.15□□□□□ -2.07
RPL40AYIL148W SLM5P25345 492 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W HEL1P36113 551 aa2.15□□□□□ -2.07
RPL40AYIL148W YBL028CP38202 106 aa2.15□□□□□ -2.07
RPL40AYIL148W MTC6P38849 526 aa2.15□□□□□ -2.07
RPL40AYIL148W MMF1P40185 145 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W GAT2P40209 560 aa2.15□□□□□ -2.07
RPL40AYIL148W GCD10P41814 478 aa2.15□□□□□ -2.07
RPL40AYIL148W IDP2P41939 412 aa2.15□□□□□ -2.07
RPL40AYIL148W NCA3P46955 337 aa2.15□□□□□ -2.07
RPL40AYIL148W RHO5P53879 331 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W KTR5P53966 522 aaPredicted RBP2.15□□□□□ -2.07
RPL40AYIL148W SCW10Q04951 389 aa2.15□□□□□ -2.07
RPL40AYIL148W YTH1Q06102 208 aaPredicted RBP2.15□□□□□ -2.07
RPL40AYIL148W YLR456WQ06199 204 aa2.15□□□□□ -2.07
RPL40AYIL148W UAF30Q08747 228 aa2.15□□□□□ -2.07
RPL40AYIL148W SNX3Q08826 162 aaKnown RBP2.15□□□□□ -2.07
RPL40AYIL148W ATG34Q12292 412 aa2.15□□□□□ -2.07
RPL40AYIL148W ORT1Q12375 292 aa2.15□□□□□ -2.07
RPL40AYIL148W CEX1Q12453 761 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms