RNA–Protein interactions for RNA: YHR153C

SPO16, Transcript of Meiosis-specific protein involved in synaptonemal complex assembly, yeastyeast

Gene SPO16, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO16YHR153C PIR3Q03180 325 aa4.4□□□□□ -1.71
SPO16YHR153C YLR345WQ06137 509 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-HO13535 1793 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-DR5P0C2I2 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-DR6P0C2I3 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-LR2P0C2I5 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-LR3P0C2I6 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C TY1B-PR1P0C2I9 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C TY1B-PR2P0C2J0 1756 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-PR3P0C2J1 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C TY1B-JR1P47098 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-ML2Q03434 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C TY1B-ER1Q03612 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-ML1Q04711 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C TY1B-GR2Q12269 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-OLQ12273 1755 aa4.4□□□□□ -1.71
SPO16YHR153C TY1B-PLQ12414 1755 aaKnown RBP4.4□□□□□ -1.71
SPO16YHR153C MDH1P17505 334 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SPO16YHR153C CLN1P20437 546 aa4.39□□□□□ -1.71
SPO16YHR153C ATS1P31386 333 aa4.39□□□□□ -1.71
SPO16YHR153C RGT1P32862 1170 aa4.39□□□□□ -1.71
SPO16YHR153C PEX5P35056 612 aa4.39□□□□□ -1.71
SPO16YHR153C SLM4P38247 162 aa4.39□□□□□ -1.71
SPO16YHR153C ZIM17P42844 174 aa4.39□□□□□ -1.71
SPO16YHR153C RRT5P43607 289 aa4.39□□□□□ -1.71
SPO16YHR153C AVT4P50944 713 aa4.39□□□□□ -1.71
SPO16YHR153C MSO1P53604 210 aaKnown RBP4.39□□□□□ -1.71
SPO16YHR153C YIF1P53845 314 aaKnown RBP4.39□□□□□ -1.71
SPO16YHR153C ARK1P53974 638 aa4.39□□□□□ -1.71
SPO16YHR153C ACL4Q03771 387 aa4.39□□□□□ -1.71
SPO16YHR153C YMR230W-AQ3E7B5 62 aa4.39□□□□□ -1.71
SPO16YHR153C ARG4P04076 463 aaPredicted RBP4.38□□□□□ -1.71
SPO16YHR153C HIP1P06775 603 aa4.38□□□□□ -1.71
SPO16YHR153C RNA14P25298 677 aaKnown RBP4.38□□□□□ -1.71
SPO16YHR153C GEX1P25596 615 aa4.38□□□□□ -1.71
SPO16YHR153C RRT2P38332 387 aa4.38□□□□□ -1.71
SPO16YHR153C BUD27P43573 796 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SPO16YHR153C TCB2P48231 1178 aa4.38□□□□□ -1.71
SPO16YHR153C ART5P53244 586 aaKnown RBP4.38□□□□□ -1.71
SPO16YHR153C RPT4P53549 437 aaKnown RBP4.38□□□□□ -1.71
SPO16YHR153C TAF12Q03761 539 aa4.38□□□□□ -1.71
SPO16YHR153C AIM32Q04689 311 aa4.38□□□□□ -1.71
SPO16YHR153C MDM30Q05930 598 aa4.38□□□□□ -1.71
SPO16YHR153C DCS1Q06151 350 aa4.38□□□□□ -1.71
SPO16YHR153C YPL199CQ08954 240 aa4.38□□□□□ -1.71
SPO16YHR153C BUG1Q12191 341 aa4.38□□□□□ -1.71
SPO16YHR153C CPR1P14832 162 aaKnown RBP4.37□□□□□ -1.71
SPO16YHR153C SPO7P18410 259 aa4.37□□□□□ -1.71
SPO16YHR153C SPS22P25380 463 aa4.37□□□□□ -1.71
SPO16YHR153C CCT4P39078 528 aaKnown RBP4.37□□□□□ -1.71
SPO16YHR153C KTR5P53966 522 aaPredicted RBP4.37□□□□□ -1.71
SPO16YHR153C SXM1Q04175 944 aaKnown RBP4.37□□□□□ -1.71
SPO16YHR153C MMR1Q06324 491 aa4.37□□□□□ -1.71
SPO16YHR153C DIS3Q08162 1001 aaKnown RBP4.37□□□□□ -1.71
SPO16YHR153C PKH2Q12236 1081 aaKnown RBP4.37□□□□□ -1.71
SPO16YHR153C TY2B-BQ12491 1770 aa4.37□□□□□ -1.71
SPO16YHR153C PMR1P13586 950 aa4.36□□□□□ -1.71
SPO16YHR153C TIP1P27654 210 aaPredicted RBP4.36□□□□□ -1.71
SPO16YHR153C ERV1P27882 189 aa4.36□□□□□ -1.71
SPO16YHR153C AGA1P32323 725 aa4.36□□□□□ -1.71
SPO16YHR153C LYS1P38998 373 aaRIP-Chip data4.36□□□□□ -1.71 RIP-Chip
SPO16YHR153C MST28P39552 234 aa4.36□□□□□ -1.71
SPO16YHR153C MKT1P40850 830 aaKnown RBP4.36□□□□□ -1.71
SPO16YHR153C TOM22P49334 152 aa4.36□□□□□ -1.71
SPO16YHR153C YNR048WP53740 393 aa4.36□□□□□ -1.71
SPO16YHR153C IMP4P53941 290 aaKnown RBP4.36□□□□□ -1.71
SPO16YHR153C YTH1Q06102 208 aaPredicted RBP4.36□□□□□ -1.71
SPO16YHR153C HNT3Q08702 217 aa4.36□□□□□ -1.71
SPO16YHR153C TIM18Q08749 192 aa4.36□□□□□ -1.71
SPO16YHR153C VPS54Q12071 889 aa4.36□□□□□ -1.71
SPO16YHR153C MTR10Q99189 972 aa4.36□□□□□ -1.71
SPO16YHR153C TOP2P06786 1428 aaKnown RBP4.36□□□□□ -1.71
SPO16YHR153C PRP16P15938 1071 aaPredicted RBP4.35□□□□□ -1.71
SPO16YHR153C CPR3P25719 182 aa4.35□□□□□ -1.71
SPO16YHR153C SMY1P32364 656 aaKnown RBP4.35□□□□□ -1.71
SPO16YHR153C MRP4P32902 394 aa4.35□□□□□ -1.71
SPO16YHR153C LTV1P34078 463 aa4.35□□□□□ -1.71
SPO16YHR153C NAT2P37293 288 aa4.35□□□□□ -1.71
SPO16YHR153C RRN10P38204 145 aa4.35□□□□□ -1.71
SPO16YHR153C PCA1P38360 1216 aa4.35□□□□□ -1.71
SPO16YHR153C YFL067WP43537 175 aa4.35□□□□□ -1.71
SPO16YHR153C LAM5P43560 674 aa4.35□□□□□ -1.71
SPO16YHR153C YGR111WP53265 400 aa4.35□□□□□ -1.71
SPO16YHR153C SKI7Q08491 747 aaPredicted RBP4.35□□□□□ -1.71
SPO16YHR153C AEP3Q12089 606 aa4.35□□□□□ -1.71
SPO16YHR153C HEM15P16622 393 aa4.34□□□□□ -1.71
SPO16YHR153C LSB5P25369 354 aa4.34□□□□□ -1.71
SPO16YHR153C SOR1P35497 357 aaKnown RBP4.34□□□□□ -1.71
SPO16YHR153C TIF5P38431 405 aaKnown RBP4.34□□□□□ -1.71
SPO16YHR153C YAL037WP39728 267 aa4.34□□□□□ -1.71
SPO16YHR153C HMS2P47175 358 aa4.34□□□□□ -1.71
SPO16YHR153C RSC1P53236 928 aa4.34□□□□□ -1.71
SPO16YHR153C FRE4P53746 719 aa4.34□□□□□ -1.71
SPO16YHR153C YMR181CQ03231 154 aa4.34□□□□□ -1.71
SPO16YHR153C RRN11Q04712 507 aa4.34□□□□□ -1.71
SPO16YHR153C SOR2Q07786 357 aa4.34□□□□□ -1.71
SPO16YHR153C YLL056CQ12177 298 aa4.34□□□□□ -1.71
SPO16YHR153C RUP1Q12242 671 aa4.34□□□□□ -1.71
SPO16YHR153C RRP12Q12754 1228 aaKnown RBP4.34□□□□□ -1.71
SPO16YHR153C RAD61Q99359 647 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms