RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A VPS38Q05919 439 aa3.1□□□□□ -1.91
EFG1YGR271C-A VTA1Q06263 330 aa3.1□□□□□ -1.91
EFG1YGR271C-A NOP6Q07623 225 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A PML1Q07930 204 aaPredicted RBP3.1□□□□□ -1.91
EFG1YGR271C-A DCI1Q08558 271 aa3.1□□□□□ -1.91
EFG1YGR271C-A YOR387CQ08910 206 aa3.1□□□□□ -1.91
EFG1YGR271C-A AVL9Q12500 764 aa3.1□□□□□ -1.91
EFG1YGR271C-A SOD1P00445 154 aaKnown RBP3.09□□□□□ -1.91
EFG1YGR271C-A PHO91P27514 894 aa3.09□□□□□ -1.91
EFG1YGR271C-A NAM9P27929 486 aa3.09□□□□□ -1.91
EFG1YGR271C-A YME1P32795 747 aa3.09□□□□□ -1.91
EFG1YGR271C-A MRE11P32829 692 aa3.09□□□□□ -1.91
EFG1YGR271C-A SEC66P33754 206 aa3.09□□□□□ -1.91
EFG1YGR271C-A PMT1P33775 817 aa3.09□□□□□ -1.91
EFG1YGR271C-A MRPL40P36534 297 aa3.09□□□□□ -1.91
EFG1YGR271C-A HSM3P38348 480 aa3.09□□□□□ -1.91
EFG1YGR271C-A SMC2P38989 1170 aaKnown RBP3.09□□□□□ -1.91
EFG1YGR271C-A AFG3P39925 761 aa3.09□□□□□ -1.91
EFG1YGR271C-A YIL089WP40500 205 aa3.09□□□□□ -1.91
EFG1YGR271C-A SGN1P40561 250 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
EFG1YGR271C-A CHS6P40955 746 aa3.09□□□□□ -1.91
EFG1YGR271C-A LAM5P43560 674 aa3.09□□□□□ -1.91
EFG1YGR271C-A AGX1P43567 385 aa3.09□□□□□ -1.91
EFG1YGR271C-A GWT1P47026 490 aa3.09□□□□□ -1.91
EFG1YGR271C-A PET130P47065 347 aa3.09□□□□□ -1.91
EFG1YGR271C-A NUP84P52891 726 aa3.09□□□□□ -1.91
EFG1YGR271C-A MLC1P53141 149 aa3.09□□□□□ -1.91
EFG1YGR271C-A YGL039WP53183 348 aaKnown RBP3.09□□□□□ -1.91
EFG1YGR271C-A RPN14P53196 417 aa3.09□□□□□ -1.91
EFG1YGR271C-A TOF2Q02208 771 aa3.09□□□□□ -1.91
EFG1YGR271C-A CFT2Q12102 859 aaPredicted RBP3.09□□□□□ -1.91
EFG1YGR271C-A TMS1Q12116 473 aa3.09□□□□□ -1.91
EFG1YGR271C-A CHD1P32657 1468 aa3.09□□□□□ -1.92
EFG1YGR271C-A GAL80P04387 435 aa3.08□□□□□ -1.92
EFG1YGR271C-A DAP2P18962 818 aa3.08□□□□□ -1.92
EFG1YGR271C-A SNT1P25357 1226 aa3.08□□□□□ -1.92
EFG1YGR271C-A YBR144CP34215 104 aa3.08□□□□□ -1.92
EFG1YGR271C-A ICS2P38284 255 aa3.08□□□□□ -1.92
EFG1YGR271C-A REE1P40893 198 aa3.08□□□□□ -1.92
EFG1YGR271C-A HXT14P42833 540 aa3.08□□□□□ -1.92
EFG1YGR271C-A ALK1P43633 760 aaKnown RBP3.08□□□□□ -1.92
EFG1YGR271C-A ARK1P53974 638 aa3.08□□□□□ -1.92
EFG1YGR271C-A EGD1Q02642 157 aaKnown RBP3.08□□□□□ -1.92
EFG1YGR271C-A ELP3Q02908 557 aaKnown RBP3.08□□□□□ -1.92
EFG1YGR271C-A UAF30Q08747 228 aa3.08□□□□□ -1.92
EFG1YGR271C-A RUD3Q12234 484 aaKnown RBP3.08□□□□□ -1.92
EFG1YGR271C-A TFB5Q3E7C1 72 aaPredicted RBP3.08□□□□□ -1.92
EFG1YGR271C-A YIL002W-AQ3E7Z5 69 aa3.08□□□□□ -1.92
EFG1YGR271C-A HIP1P06775 603 aa3.07□□□□□ -1.92
EFG1YGR271C-A RPL3P14126 387 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A PUT4P15380 627 aa3.07□□□□□ -1.92
EFG1YGR271C-A PET123P17558 318 aa3.07□□□□□ -1.92
EFG1YGR271C-A EXO70P19658 623 aa3.07□□□□□ -1.92
EFG1YGR271C-A ARO2P28777 376 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A AFG1P32317 509 aa3.07□□□□□ -1.92
EFG1YGR271C-A YME2P32843 850 aa3.07□□□□□ -1.92
EFG1YGR271C-A WBP1P33767 430 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A COY1P34237 679 aa3.07□□□□□ -1.92
EFG1YGR271C-A HCS1P34243 683 aa3.07□□□□□ -1.92
EFG1YGR271C-A CAB3P36076 571 aa3.07□□□□□ -1.92
EFG1YGR271C-A TCD2P36101 447 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A SLM4P38247 162 aa3.07□□□□□ -1.92
EFG1YGR271C-A CUE3P53137 624 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A FIN1Q03898 291 aa3.07□□□□□ -1.92
EFG1YGR271C-A PPM1Q04081 328 aa3.07□□□□□ -1.92
EFG1YGR271C-A PAL1Q05518 499 aaKnown RBP3.07□□□□□ -1.92
EFG1YGR271C-A FMP40Q08968 688 aaPredicted RBP3.07□□□□□ -1.92
EFG1YGR271C-A PFK27Q12471 397 aaPredicted RBP3.07□□□□□ -1.92
EFG1YGR271C-A NBL1Q3E7Y6 73 aa3.07□□□□□ -1.92
EFG1YGR271C-A TAL1P15019 335 aaKnown RBP3.06□□□□□ -1.92
EFG1YGR271C-A HEM15P16622 393 aa3.06□□□□□ -1.92
EFG1YGR271C-A EST1P17214 699 aaPredicted RBP3.06□□□□□ -1.92
EFG1YGR271C-A NTG1P31378 399 aa3.06□□□□□ -1.92
EFG1YGR271C-A HXT3P32466 567 aaKnown RBP3.06□□□□□ -1.92
EFG1YGR271C-A RML2P32611 393 aa3.06□□□□□ -1.92
EFG1YGR271C-A YBL059WP34224 193 aa3.06□□□□□ -1.92
EFG1YGR271C-A YUH1P35127 236 aa3.06□□□□□ -1.92
EFG1YGR271C-A THI2P38141 450 aa3.06□□□□□ -1.92
EFG1YGR271C-A YGR266WP53326 701 aa3.06□□□□□ -1.92
EFG1YGR271C-A RHO5P53879 331 aaKnown RBP3.06□□□□□ -1.92
EFG1YGR271C-A AQR1P53943 586 aa3.06□□□□□ -1.92
EFG1YGR271C-A YLR152CP54072 576 aa3.06□□□□□ -1.92
EFG1YGR271C-A RPC11Q04307 110 aaPredicted RBP3.06□□□□□ -1.92
EFG1YGR271C-A RRN11Q04712 507 aa3.06□□□□□ -1.92
EFG1YGR271C-A RBS1Q05672 457 aaKnown RBP3.06□□□□□ -1.92
EFG1YGR271C-A YLR278CQ05854 1341 aa3.06□□□□□ -1.92
EFG1YGR271C-A VPS54Q12071 889 aa3.06□□□□□ -1.92
EFG1YGR271C-A YDR061WQ12298 539 aa3.06□□□□□ -1.92
EFG1YGR271C-A SGS1P35187 1447 aa3.05□□□□□ -1.92
EFG1YGR271C-A YML133CQ03099 1374 aa3.05□□□□□ -1.92
EFG1YGR271C-A YLL067CQ07888 1374 aa3.05□□□□□ -1.92
EFG1YGR271C-A YLL066CQ99208 1374 aa3.05□□□□□ -1.92
EFG1YGR271C-A GAL7P08431 366 aa3.05□□□□□ -1.92
EFG1YGR271C-A CPR1P14832 162 aaKnown RBP3.05□□□□□ -1.92
EFG1YGR271C-A ARO3P14843 370 aaKnown RBP3.05□□□□□ -1.92
EFG1YGR271C-A ELO2P25358 347 aa3.05□□□□□ -1.92
EFG1YGR271C-A PRD1P25375 712 aa3.05□□□□□ -1.92
EFG1YGR271C-A IDH2P28241 369 aaKnown RBP3.05□□□□□ -1.92
EFG1YGR271C-A DEG1P31115 442 aaKnown RBP3.05□□□□□ -1.92
EFG1YGR271C-A PRS1P32895 427 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms