RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W HEM15P16622 393 aa3.54□□□□□ -1.84
PRP18YGR006W SAM2P19358 384 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W LSB5P25369 354 aa3.54□□□□□ -1.84
PRP18YGR006W CPR3P25719 182 aa3.54□□□□□ -1.84
PRP18YGR006W SMY1P32364 656 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W TIF5P38431 405 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W YFL067WP43537 175 aa3.54□□□□□ -1.84
PRP18YGR006W LAM5P43560 674 aa3.54□□□□□ -1.84
PRP18YGR006W TOM22P49334 152 aa3.54□□□□□ -1.84
PRP18YGR006W IMP4P53941 290 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W SKI7Q08491 747 aaPredicted RBP3.54□□□□□ -1.84
PRP18YGR006W YLL056CQ12177 298 aa3.54□□□□□ -1.84
PRP18YGR006W ORT1Q12375 292 aa3.54□□□□□ -1.84
PRP18YGR006W RRP12Q12754 1228 aaKnown RBP3.54□□□□□ -1.84
PRP18YGR006W TY1B-AO13527 1196 aaKnown RBP3.53□□□□□ -1.84
PRP18YGR006W TEF1P02994 458 aaKnown RBP3.53□□□□□ -1.84
PRP18YGR006W CTR86P25355 563 aa3.53□□□□□ -1.84
PRP18YGR006W LTV1P34078 463 aa3.53□□□□□ -1.84
PRP18YGR006W MIX23P38162 196 aa3.53□□□□□ -1.84
PRP18YGR006W LRP1P38801 184 aaKnown RBP3.53□□□□□ -1.84
PRP18YGR006W YHR218WP38899 603 aa3.53□□□□□ -1.84
PRP18YGR006W KRE9P39005 276 aa3.53□□□□□ -1.84
PRP18YGR006W PHO86P46956 311 aa3.53□□□□□ -1.84
PRP18YGR006W OCA2P53949 197 aa3.53□□□□□ -1.84
PRP18YGR006W YMR181CQ03231 154 aa3.53□□□□□ -1.84
PRP18YGR006W RSN1Q03516 953 aa3.53□□□□□ -1.84
PRP18YGR006W RRN11Q04712 507 aa3.53□□□□□ -1.84
PRP18YGR006W THP3Q12049 470 aaKnown RBP3.53□□□□□ -1.84
PRP18YGR006W YCL021W-AQ96VH3 125 aa3.53□□□□□ -1.84
PRP18YGR006W RAD61Q99359 647 aa3.53□□□□□ -1.84
PRP18YGR006W SWH1P35845 1188 aa3.52□□□□□ -1.85
PRP18YGR006W RIB5P38145 238 aa3.52□□□□□ -1.85
PRP18YGR006W PCF11P39081 626 aaPredicted RBP3.52□□□□□ -1.85
PRP18YGR006W YAL037WP39728 267 aa3.52□□□□□ -1.85
PRP18YGR006W VHS2P40463 436 aa3.52□□□□□ -1.85
PRP18YGR006W GPI15P53961 229 aa3.52□□□□□ -1.85
PRP18YGR006W GIP3Q03016 1276 aa3.52□□□□□ -1.85
PRP18YGR006W BET5Q03630 159 aa3.52□□□□□ -1.85
PRP18YGR006W HEL2Q05580 639 aaKnown RBP3.52□□□□□ -1.85
PRP18YGR006W DCI1Q08558 271 aa3.52□□□□□ -1.85
PRP18YGR006W ADE4P04046 510 aaKnown RBP3.51□□□□□ -1.85
PRP18YGR006W CHS1P08004 1131 aa3.51□□□□□ -1.85
PRP18YGR006W CDC60P26637 1090 aaKnown RBP3.51□□□□□ -1.85
PRP18YGR006W NIP1P32497 812 aaKnown RBP3.51□□□□□ -1.85
PRP18YGR006W FAA2P39518 744 aa3.51□□□□□ -1.85
PRP18YGR006W SER3P40054 469 aa3.51□□□□□ -1.85
PRP18YGR006W BOR1P53838 576 aa3.51□□□□□ -1.85
PRP18YGR006W GOR1P53839 350 aa3.51□□□□□ -1.85
PRP18YGR006W GYL1Q04322 720 aa3.51□□□□□ -1.85
PRP18YGR006W ESA1Q08649 445 aa3.51□□□□□ -1.85
PRP18YGR006W RUP1Q12242 671 aa3.51□□□□□ -1.85
PRP18YGR006W YLR108CQ12259 485 aa3.51□□□□□ -1.85
PRP18YGR006W GPM3Q12326 303 aa3.51□□□□□ -1.85
PRP18YGR006W RMD5Q12508 421 aa3.51□□□□□ -1.85
PRP18YGR006W ILV5P06168 395 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W CBS2P14905 389 aa3.5□□□□□ -1.85
PRP18YGR006W KKQ8P36004 724 aa3.5□□□□□ -1.85
PRP18YGR006W ASC1P38011 319 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W OLA1P38219 394 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W ZTA1P38230 334 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W RRP4P38792 359 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W OST1P41543 476 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W YJL055WP47044 245 aa3.5□□□□□ -1.85
PRP18YGR006W OAZ1Q02803 292 aa3.5□□□□□ -1.85
PRP18YGR006W RPN9Q04062 393 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W UAF30Q08747 228 aa3.5□□□□□ -1.85
PRP18YGR006W SPE3Q12074 293 aaKnown RBP3.5□□□□□ -1.85
PRP18YGR006W ATG34Q12292 412 aa3.5□□□□□ -1.85
PRP18YGR006W ITR1P30605 584 aa3.49□□□□□ -1.85
PRP18YGR006W SDH3P33421 198 aa3.49□□□□□ -1.85
PRP18YGR006W MTC6P38849 526 aa3.49□□□□□ -1.85
PRP18YGR006W PRP42Q03776 544 aaKnown RBP3.49□□□□□ -1.85
PRP18YGR006W URH1Q04179 340 aa3.49□□□□□ -1.85
PRP18YGR006W YER078W-AQ3E7A2 54 aa3.49□□□□□ -1.85
PRP18YGR006W HHF1P02309 103 aaKnown RBP3.48□□□□□ -1.85
PRP18YGR006W SLY1P22213 666 aa3.48□□□□□ -1.85
PRP18YGR006W RAD57P25301 460 aa3.48□□□□□ -1.85
PRP18YGR006W HSP104P31539 908 aaKnown RBP3.48□□□□□ -1.85
PRP18YGR006W GAT2P40209 560 aa3.48□□□□□ -1.85
PRP18YGR006W YPS6P40583 537 aa3.48□□□□□ -1.85
PRP18YGR006W WWM1P43582 211 aaKnown RBP3.48□□□□□ -1.85
PRP18YGR006W PHB2P50085 310 aa3.48□□□□□ -1.85
PRP18YGR006W PPM1Q04081 328 aa3.48□□□□□ -1.85
PRP18YGR006W YLR456WQ06199 204 aa3.48□□□□□ -1.85
PRP18YGR006W SNX3Q08826 162 aaKnown RBP3.48□□□□□ -1.85
PRP18YGR006W COX3P00420 269 aa3.47□□□□□ -1.85
PRP18YGR006W SPT15P13393 240 aaKnown RBP3.47□□□□□ -1.85
PRP18YGR006W ARO3P14843 370 aaKnown RBP3.47□□□□□ -1.85
PRP18YGR006W SPO12P17123 173 aa3.47□□□□□ -1.85
PRP18YGR006W MNE1P24720 663 aa3.47□□□□□ -1.85
PRP18YGR006W CPR4P25334 318 aa3.47□□□□□ -1.85
PRP18YGR006W DEG1P31115 442 aaKnown RBP3.47□□□□□ -1.85
PRP18YGR006W RIM1P32445 135 aaKnown RBP3.47□□□□□ -1.85
PRP18YGR006W MDL1P33310 695 aa3.47□□□□□ -1.85
PRP18YGR006W PAD1P33751 242 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
PRP18YGR006W YBL059WP34224 193 aa3.47□□□□□ -1.85
PRP18YGR006W HEL1P36113 551 aa3.47□□□□□ -1.85
PRP18YGR006W YBR056WP38081 501 aa3.47□□□□□ -1.85
PRP18YGR006W FAD1P38913 306 aa3.47□□□□□ -1.85
PRP18YGR006W GDI1P39958 451 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms