RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W UTR1P21373 530 aa3.96□□□□□ -1.78
PTR3YFR029W IMG1P25626 169 aa3.96□□□□□ -1.78
PTR3YFR029W DEG1P31115 442 aaKnown RBP3.96□□□□□ -1.78
PTR3YFR029W COS9P36034 407 aa3.96□□□□□ -1.78
PTR3YFR029W DUG2P38149 878 aa3.96□□□□□ -1.78
PTR3YFR029W LDB7P38210 180 aa3.96□□□□□ -1.78
PTR3YFR029W STP2P38704 541 aa3.96□□□□□ -1.78
PTR3YFR029W YHR122WP38829 231 aa3.96□□□□□ -1.78
PTR3YFR029W FET3P38993 636 aa3.96□□□□□ -1.78
PTR3YFR029W HXT9P40885 567 aa3.96□□□□□ -1.78
PTR3YFR029W LSB3P43603 459 aaKnown RBP3.96□□□□□ -1.78
PTR3YFR029W UBX6P47049 396 aa3.96□□□□□ -1.78
PTR3YFR029W STE24P47154 453 aa3.96□□□□□ -1.78
PTR3YFR029W MSE1P48525 536 aa3.96□□□□□ -1.78
PTR3YFR029W VPS62P53285 467 aa3.96□□□□□ -1.78
PTR3YFR029W ZPR1P53303 486 aaKnown RBP3.96□□□□□ -1.78
PTR3YFR029W TRM112P53738 135 aaPredicted RBP3.96□□□□□ -1.78
PTR3YFR029W YNL260CP53846 198 aa3.96□□□□□ -1.78
PTR3YFR029W HXT11P54862 567 aa3.96□□□□□ -1.78
PTR3YFR029W RPS15Q01855 142 aaKnown RBP3.96□□□□□ -1.78
PTR3YFR029W YDR541CQ03049 344 aa3.96□□□□□ -1.78
PTR3YFR029W YMR178WQ03219 274 aaKnown RBP3.96□□□□□ -1.78
PTR3YFR029W CDC123Q05791 360 aa3.96□□□□□ -1.78
PTR3YFR029W DUS4Q06063 367 aa3.96□□□□□ -1.78
PTR3YFR029W IZH3Q07959 543 aa3.96□□□□□ -1.78
PTR3YFR029W PRP46Q12417 451 aaPredicted RBP3.96□□□□□ -1.78
PTR3YFR029W LAS17Q12446 633 aa3.96□□□□□ -1.78
PTR3YFR029W TRM11Q12463 433 aa3.96□□□□□ -1.78
PTR3YFR029W YCL012CQ8J0M4 134 aa3.96□□□□□ -1.78
PTR3YFR029W TEF1P02994 458 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W RAD3P06839 778 aa3.95□□□□□ -1.78
PTR3YFR029W GDH1P07262 454 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W RPL18AP0CX49 186 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W RPL18BP0CX50 186 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W SEC63P14906 663 aa3.95□□□□□ -1.78
PTR3YFR029W SAR1P20606 190 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W ATP11P32453 318 aa3.95□□□□□ -1.78
PTR3YFR029W RRP1P35178 278 aaPredicted RBP3.95□□□□□ -1.78
PTR3YFR029W DOA1P36037 715 aa3.95□□□□□ -1.78
PTR3YFR029W YKL071WP36086 256 aa3.95□□□□□ -1.78
PTR3YFR029W RIB1P38066 345 aa3.95□□□□□ -1.78
PTR3YFR029W ARA1P38115 344 aa3.95□□□□□ -1.78
PTR3YFR029W SDH8P38345 138 aa3.95□□□□□ -1.78
PTR3YFR029W BIG1P38813 335 aa3.95□□□□□ -1.78
PTR3YFR029W UBA4P38820 440 aa3.95□□□□□ -1.78
PTR3YFR029W PLB1P39105 664 aa3.95□□□□□ -1.78
PTR3YFR029W ELO1P39540 310 aa3.95□□□□□ -1.78
PTR3YFR029W NPA3P47122 385 aa3.95□□□□□ -1.78
PTR3YFR029W MSY1P48527 492 aa3.95□□□□□ -1.78
PTR3YFR029W YGL108CP53139 140 aa3.95□□□□□ -1.78
PTR3YFR029W YGR035CP53222 116 aa3.95□□□□□ -1.78
PTR3YFR029W NRG1Q03125 231 aa3.95□□□□□ -1.78
PTR3YFR029W TAF12Q03761 539 aa3.95□□□□□ -1.78
PTR3YFR029W YDR222WQ04925 415 aa3.95□□□□□ -1.78
PTR3YFR029W REX4Q08237 289 aa3.95□□□□□ -1.78
PTR3YFR029W FRE5Q08908 694 aa3.95□□□□□ -1.78
PTR3YFR029W YDL109CQ12103 647 aa3.95□□□□□ -1.78
PTR3YFR029W NPC2Q12408 173 aa3.95□□□□□ -1.78
PTR3YFR029W RMD5Q12508 421 aa3.95□□□□□ -1.78
PTR3YFR029W COX1P00401 534 aa3.95□□□□□ -1.78
PTR3YFR029W YAK1P14680 807 aa3.95□□□□□ -1.78
PTR3YFR029W FRS2P15625 503 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W THR4P16120 514 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W GPI12P23797 304 aa3.95□□□□□ -1.78
PTR3YFR029W GSH1P32477 678 aa3.95□□□□□ -1.78
PTR3YFR029W RPF2P36160 344 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W CHK1P38147 527 aa3.95□□□□□ -1.78
PTR3YFR029W QDR3P38227 689 aa3.95□□□□□ -1.78
PTR3YFR029W EGD2P38879 174 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W PRP39P39682 629 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W RFC4P40339 323 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W YNL092WP53934 400 aa3.95□□□□□ -1.78
PTR3YFR029W MRI1Q06489 411 aaKnown RBP3.95□□□□□ -1.78
PTR3YFR029W MED2Q12124 431 aa3.95□□□□□ -1.78
PTR3YFR029W YDR262WQ12331 272 aa3.95□□□□□ -1.78
PTR3YFR029W UBA3Q99344 299 aa3.95□□□□□ -1.78
PTR3YFR029W AI5_ALPHAQ9ZZX1 630 aa3.95□□□□□ -1.78
PTR3YFR029W RIP1P08067 215 aa3.94□□□□□ -1.78
PTR3YFR029W RPS16AP0CX51 143 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W RPS16BP0CX52 143 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W RHB1P25378 209 aa3.94□□□□□ -1.78
PTR3YFR029W MSS51P32335 436 aa3.94□□□□□ -1.78
PTR3YFR029W SPS19P32573 292 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W SKT5P34226 696 aa3.94□□□□□ -1.78
PTR3YFR029W RPC25P35718 212 aa3.94□□□□□ -1.78
PTR3YFR029W YPT52P36018 234 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W DIA4P38705 446 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W PFS1P38872 237 aa3.94□□□□□ -1.78
PTR3YFR029W SPG5P42933 373 aa3.94□□□□□ -1.78
PTR3YFR029W SLX9P53251 210 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W SPP2Q02521 185 aa3.94□□□□□ -1.78
PTR3YFR029W NUP116Q02630 1113 aa3.94□□□□□ -1.78
PTR3YFR029W CTK1Q03957 528 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W PAM18Q07914 168 aa3.94□□□□□ -1.78
PTR3YFR029W DIA2Q08496 732 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W YPR022CQ12139 1133 aa3.94□□□□□ -1.78
PTR3YFR029W ADE4P04046 510 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W MAS1P10507 462 aa3.94□□□□□ -1.78
PTR3YFR029W ERG11P10614 530 aa3.94□□□□□ -1.78
PTR3YFR029W PPA2P28239 310 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms