RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RNA14P25298 677 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W TIP1P27654 210 aaPredicted RBP3.09□□□□□ -1.91
SEC4YFL005W NIP1P32497 812 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W MDL1P33310 695 aa3.09□□□□□ -1.91
SEC4YFL005W ASC1P38011 319 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W ZTA1P38230 334 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W MST28P39552 234 aa3.09□□□□□ -1.91
SEC4YFL005W GDI1P39958 451 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W LCB2P40970 561 aa3.09□□□□□ -1.91
SEC4YFL005W IDP2P41939 412 aa3.09□□□□□ -1.91
SEC4YFL005W HMS2P47175 358 aa3.09□□□□□ -1.91
SEC4YFL005W YNR048WP53740 393 aa3.09□□□□□ -1.91
SEC4YFL005W FRE4P53746 719 aa3.09□□□□□ -1.91
SEC4YFL005W OCA2P53949 197 aa3.09□□□□□ -1.91
SEC4YFL005W SKI7Q08491 747 aaPredicted RBP3.09□□□□□ -1.91
SEC4YFL005W TIM18Q08749 192 aa3.09□□□□□ -1.91
SEC4YFL005W YPL199CQ08954 240 aa3.09□□□□□ -1.91
SEC4YFL005W YPR022CQ12139 1133 aa3.09□□□□□ -1.91
SEC4YFL005W PKH2Q12236 1081 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W YMR230W-AQ3E7B5 62 aa3.09□□□□□ -1.91
SEC4YFL005W SAM1P10659 382 aaKnown RBP3.08□□□□□ -1.92
SEC4YFL005W PMR1P13586 950 aa3.08□□□□□ -1.92
SEC4YFL005W SAM2P19358 384 aaKnown RBP3.08□□□□□ -1.92
SEC4YFL005W LSB5P25369 354 aa3.08□□□□□ -1.92
SEC4YFL005W BLI1P35727 113 aa3.08□□□□□ -1.92
SEC4YFL005W PCA1P38360 1216 aa3.08□□□□□ -1.92
SEC4YFL005W YAL037WP39728 267 aa3.08□□□□□ -1.92
SEC4YFL005W MSO1P53604 210 aaKnown RBP3.08□□□□□ -1.92
SEC4YFL005W RPN9Q04062 393 aaKnown RBP3.08□□□□□ -1.92
SEC4YFL005W YLR456WQ06199 204 aa3.08□□□□□ -1.92
SEC4YFL005W HNT3Q08702 217 aa3.08□□□□□ -1.92
SEC4YFL005W YLL056CQ12177 298 aa3.08□□□□□ -1.92
SEC4YFL005W RPN5Q12250 445 aaKnown RBP3.08□□□□□ -1.92
SEC4YFL005W RMD5Q12508 421 aa3.08□□□□□ -1.92
SEC4YFL005W COX3P00420 269 aa3.07□□□□□ -1.92
SEC4YFL005W TEF1P02994 458 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W RPL1AP0CX43 217 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W RPL1BP0CX44 217 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W CPR1P14832 162 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W AGA1P32323 725 aa3.07□□□□□ -1.92
SEC4YFL005W MRP4P32902 394 aa3.07□□□□□ -1.92
SEC4YFL005W NAT2P37293 288 aa3.07□□□□□ -1.92
SEC4YFL005W OLA1P38219 394 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W YBP1P38315 674 aa3.07□□□□□ -1.92
SEC4YFL005W RRP4P38792 359 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W YPS6P40583 537 aa3.07□□□□□ -1.92
SEC4YFL005W WSC2P53832 503 aa3.07□□□□□ -1.92
SEC4YFL005W IBD2P53892 351 aa3.07□□□□□ -1.92
SEC4YFL005W GPI15P53961 229 aa3.07□□□□□ -1.92
SEC4YFL005W GIP3Q03016 1276 aa3.07□□□□□ -1.92
SEC4YFL005W ERO1Q03103 563 aa3.07□□□□□ -1.92
SEC4YFL005W RSN1Q03516 953 aa3.07□□□□□ -1.92
SEC4YFL005W BET5Q03630 159 aa3.07□□□□□ -1.92
SEC4YFL005W PRP42Q03776 544 aaKnown RBP3.07□□□□□ -1.92
SEC4YFL005W RUP1Q12242 671 aa3.07□□□□□ -1.92
SEC4YFL005W RAD61Q99359 647 aa3.07□□□□□ -1.92
SEC4YFL005W ILV5P06168 395 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W CHS1P08004 1131 aa3.06□□□□□ -1.92
SEC4YFL005W SPS22P25380 463 aa3.06□□□□□ -1.92
SEC4YFL005W ITR1P30605 584 aa3.06□□□□□ -1.92
SEC4YFL005W RIM1P32445 135 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W RIB5P38145 238 aa3.06□□□□□ -1.92
SEC4YFL005W MIX23P38162 196 aa3.06□□□□□ -1.92
SEC4YFL005W TIF5P38431 405 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W FAD1P38913 306 aa3.06□□□□□ -1.92
SEC4YFL005W PCF11P39081 626 aaPredicted RBP3.06□□□□□ -1.92
SEC4YFL005W GAT2P40209 560 aa3.06□□□□□ -1.92
SEC4YFL005W SEC28P40509 296 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W EFM4P40516 257 aa3.06□□□□□ -1.92
SEC4YFL005W MKT1P40850 830 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W LAM5P43560 674 aa3.06□□□□□ -1.92
SEC4YFL005W YMR181CQ03231 154 aa3.06□□□□□ -1.92
SEC4YFL005W URH1Q04179 340 aa3.06□□□□□ -1.92
SEC4YFL005W ATG34Q12292 412 aa3.06□□□□□ -1.92
SEC4YFL005W RRP12Q12754 1228 aaKnown RBP3.06□□□□□ -1.92
SEC4YFL005W PHO2P07269 559 aa3.05□□□□□ -1.92
SEC4YFL005W PRP16P15938 1071 aaPredicted RBP3.05□□□□□ -1.92
SEC4YFL005W HEM15P16622 393 aa3.05□□□□□ -1.92
SEC4YFL005W RAD57P25301 460 aa3.05□□□□□ -1.92
SEC4YFL005W PUP2P32379 260 aa3.05□□□□□ -1.92
SEC4YFL005W HEL1P36113 551 aa3.05□□□□□ -1.92
SEC4YFL005W FAA2P39518 744 aa3.05□□□□□ -1.92
SEC4YFL005W PEX25Q02969 394 aa3.05□□□□□ -1.92
SEC4YFL005W YDR341CQ05506 607 aaKnown RBP3.05□□□□□ -1.92
SEC4YFL005W RTT103Q05543 409 aa3.05□□□□□ -1.92
SEC4YFL005W THP3Q12049 470 aaKnown RBP3.05□□□□□ -1.92
SEC4YFL005W YCL021W-AQ96VH3 125 aa3.05□□□□□ -1.92
SEC4YFL005W ALG1P16661 449 aa3.04□□□□□ -1.92
SEC4YFL005W SPO12P17123 173 aa3.04□□□□□ -1.92
SEC4YFL005W RRP7P25368 297 aaPredicted RBP3.04□□□□□ -1.92
SEC4YFL005W HSP104P31539 908 aaKnown RBP3.04□□□□□ -1.92
SEC4YFL005W SWI3P32591 825 aa3.04□□□□□ -1.92
SEC4YFL005W RXT2P38255 430 aa3.04□□□□□ -1.92
SEC4YFL005W STN1P38960 494 aa3.04□□□□□ -1.92
SEC4YFL005W KRE9P39005 276 aa3.04□□□□□ -1.92
SEC4YFL005W OST1P41543 476 aaKnown RBP3.04□□□□□ -1.92
SEC4YFL005W YFL067WP43537 175 aa3.04□□□□□ -1.92
SEC4YFL005W PHB2P50085 310 aa3.04□□□□□ -1.92
SEC4YFL005W PIB2P53191 635 aa3.04□□□□□ -1.92
SEC4YFL005W GOR1P53839 350 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms