RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C SAS3P34218 831 aa2.24□□□□□ -2.05
SMB1YER029C KKQ8P36004 724 aa2.24□□□□□ -2.05
SMB1YER029C VHC1P38329 1120 aa2.24□□□□□ -2.05
SMB1YER029C OTU2P38747 307 aaKnown RBP2.24□□□□□ -2.05
SMB1YER029C YHR054CP38780 354 aa2.24□□□□□ -2.05
SMB1YER029C LYS1P38998 373 aaRIP-Chip data2.24□□□□□ -2.05not detected
SMB1YER029C YJR011CP47086 261 aaPredicted RBP2.24□□□□□ -2.05
SMB1YER029C YGR250CP53316 781 aaKnown RBP2.24□□□□□ -2.05
SMB1YER029C FRE4P53746 719 aa2.24□□□□□ -2.05
SMB1YER029C RKM1Q08961 583 aaPredicted RBP2.24□□□□□ -2.05
SMB1YER029C TEF1P02994 458 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C CDC31P06704 161 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C RED1P14291 827 aa2.23□□□□□ -2.05
SMB1YER029C RVS161P25343 265 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C NPL6P32832 435 aa2.23□□□□□ -2.05
SMB1YER029C YIF1P53845 314 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C RSN1Q03516 953 aa2.23□□□□□ -2.05
SMB1YER029C ARX1Q03862 593 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C SNX3Q08826 162 aaKnown RBP2.23□□□□□ -2.05
SMB1YER029C ARG4P04076 463 aaPredicted RBP2.22□□□□□ -2.05
SMB1YER029C PRS1P32895 427 aaKnown RBP2.22□□□□□ -2.05
SMB1YER029C APE3P37302 537 aaKnown RBP2.22□□□□□ -2.05
SMB1YER029C YAL037WP39728 267 aa2.22□□□□□ -2.05
SMB1YER029C BRO1P48582 844 aa2.22□□□□□ -2.05
SMB1YER029C FMS1P50264 508 aa2.22□□□□□ -2.05
SMB1YER029C MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
SMB1YER029C CWC25P53854 179 aaKnown RBP2.22□□□□□ -2.05
SMB1YER029C APJ1P53940 528 aa2.22□□□□□ -2.05
SMB1YER029C GPI15P53961 229 aa2.22□□□□□ -2.05
SMB1YER029C SKI7Q08491 747 aaPredicted RBP2.22□□□□□ -2.05
SMB1YER029C VAM3Q12241 283 aa2.22□□□□□ -2.05
SMB1YER029C SPO12P17123 173 aa2.21□□□□□ -2.06
SMB1YER029C BEM1P29366 551 aa2.21□□□□□ -2.06
SMB1YER029C SMY1P32364 656 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C HIR2P32480 875 aa2.21□□□□□ -2.06
SMB1YER029C NIP1P32497 812 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C MUD1P32605 298 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C NFU1P32860 256 aa2.21□□□□□ -2.06
SMB1YER029C MNS1P32906 549 aa2.21□□□□□ -2.06
SMB1YER029C HCS1P34243 683 aa2.21□□□□□ -2.06
SMB1YER029C SOR1P35497 357 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C ARA1P38115 344 aa2.21□□□□□ -2.06
SMB1YER029C LSM5P40089 93 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C JLP2P40206 208 aa2.21□□□□□ -2.06
SMB1YER029C RPS0BP46654 252 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C HMS2P47175 358 aa2.21□□□□□ -2.06
SMB1YER029C AZR1P50080 613 aa2.21□□□□□ -2.06
SMB1YER029C SHY1P53266 389 aa2.21□□□□□ -2.06
SMB1YER029C TAF12Q03761 539 aa2.21□□□□□ -2.06
SMB1YER029C TSR2Q06672 205 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C SOR2Q07786 357 aa2.21□□□□□ -2.06
SMB1YER029C WTM1Q12363 437 aaKnown RBP2.21□□□□□ -2.06
SMB1YER029C SCEIP03882 235 aa2.2□□□□□ -2.06
SMB1YER029C NAT1P12945 854 aaKnown RBP2.2□□□□□ -2.06
SMB1YER029C RHB1P25378 209 aa2.2□□□□□ -2.06
SMB1YER029C POP5P28005 173 aa2.2□□□□□ -2.06
SMB1YER029C COS5P47187 383 aa2.2□□□□□ -2.06
SMB1YER029C SUB1P54000 292 aaKnown RBP2.2□□□□□ -2.06
SMB1YER029C GIP3Q03016 1276 aa2.2□□□□□ -2.06
SMB1YER029C YMR027WQ04371 470 aa2.2□□□□□ -2.06
SMB1YER029C RRP45Q05636 305 aaKnown RBP2.2□□□□□ -2.06
SMB1YER029C COG4Q06096 861 aa2.2□□□□□ -2.06
SMB1YER029C COS7Q07788 383 aa2.2□□□□□ -2.06
SMB1YER029C SRL2Q12020 392 aa2.2□□□□□ -2.06
SMB1YER029C AHC1Q12433 566 aa2.2□□□□□ -2.06
SMB1YER029C FAB1P34756 2278 aa2.2□□□□□ -2.06
SMB1YER029C CLC1P17891 233 aa2.19□□□□□ -2.06
SMB1YER029C CLB3P24870 427 aa2.19□□□□□ -2.06
SMB1YER029C RPN12P32496 274 aa2.19□□□□□ -2.06
SMB1YER029C YME2P32843 850 aa2.19□□□□□ -2.06
SMB1YER029C GAB1P41733 394 aa2.19□□□□□ -2.06
SMB1YER029C PHO86P46956 311 aa2.19□□□□□ -2.06
SMB1YER029C BET5Q03630 159 aa2.19□□□□□ -2.06
SMB1YER029C BCH1Q05029 724 aa2.19□□□□□ -2.06
SMB1YER029C SNT309Q06091 175 aaPredicted RBP2.19□□□□□ -2.06
SMB1YER029C SCM3Q12334 223 aa2.19□□□□□ -2.06
SMB1YER029C PCL1P24867 279 aa2.18□□□□□ -2.06
SMB1YER029C PCF11P39081 626 aaPredicted RBP2.18□□□□□ -2.06
SMB1YER029C SIM1P40472 476 aa2.18□□□□□ -2.06
SMB1YER029C GPD2P41911 440 aaKnown RBP2.18□□□□□ -2.06
SMB1YER029C YJR085CP47131 105 aaKnown RBP2.18□□□□□ -2.06
SMB1YER029C PHB2P50085 310 aa2.18□□□□□ -2.06
SMB1YER029C RHO5P53879 331 aaKnown RBP2.18□□□□□ -2.06
SMB1YER029C MDM1Q01846 1127 aa2.18□□□□□ -2.06
SMB1YER029C SKO1Q02100 647 aa2.18□□□□□ -2.06
SMB1YER029C PEX25Q02969 394 aa2.18□□□□□ -2.06
SMB1YER029C IRC25Q07951 179 aa2.18□□□□□ -2.06
SMB1YER029C YRF1-4O13559 1382 aa2.18□□□□□ -2.06
SMB1YER029C COX3P00420 269 aa2.17□□□□□ -2.06
SMB1YER029C NUP2P32499 720 aa2.17□□□□□ -2.06
SMB1YER029C CSE2P33308 149 aa2.17□□□□□ -2.06
SMB1YER029C UTH1P36135 365 aa2.17□□□□□ -2.06
SMB1YER029C YHR131CP38835 850 aa2.17□□□□□ -2.06
SMB1YER029C UTP18P40362 594 aaPredicted RBP2.17□□□□□ -2.06
SMB1YER029C SFH5P47008 294 aa2.17□□□□□ -2.06
SMB1YER029C TOM22P49334 152 aa2.17□□□□□ -2.06
SMB1YER029C YGL138CP53122 345 aa2.17□□□□□ -2.06
SMB1YER029C URH1Q04179 340 aa2.17□□□□□ -2.06
SMB1YER029C YLR287CQ05881 355 aa2.17□□□□□ -2.06
SMB1YER029C REX4Q08237 289 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms