RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRB1	YEL060C	EMI2	Q04409	500 aa	Known RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	YMR321C	Q04898	105 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	GRX8	Q05926	109 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	SYC1	Q08553	188 aa	Predicted RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	SNF8	Q12483	233 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	UBR1	P19812	1950 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	ADE4	P04046	510 aa	Known RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	SIR3	P06701	978 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	AMD1	P15274	810 aa	Known RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	KIN3	P22209	435 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	GAC1	P28006	793 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	EFM1	P38732	585 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	BIG1	P38813	335 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	VRG4	P40107	337 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	PRE6	P40303	254 aa	Known RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	OPT1	P40897	799 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	ECM27	P47144	725 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	MPS2	P53159	387 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	AIM36	Q03798	255 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	YMR034C	Q05131	434 aa	Predicted RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	RRG7	Q08774	242 aa	Predicted RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	RTN2	Q12443	393 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	LDB19	Q12502	818 aa		6.99	□□□□□ -1.29
PRB1	YEL060C	TIF6	Q12522	245 aa	Known RBP	6.99	□□□□□ -1.29
PRB1	YEL060C	RAD52	P06778	471 aa	Known RBP	6.98	□□□□□ -1.29
PRB1	YEL060C	DST1	P07273	309 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	AAR2	P32357	355 aa	Predicted RBP	6.98	□□□□□ -1.29
PRB1	YEL060C	YKR051W	P36142	418 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YRO2	P38079	344 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	TSL1	P38427	1098 aa	Known RBP	6.98	□□□□□ -1.29
PRB1	YEL060C	STP2	P38704	541 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	DHH1	P39517	506 aa	Known RBP	6.98	□□□□□ -1.29
PRB1	YEL060C	ACO2	P39533	789 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	AAD14	P42884	376 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	CAK1	P43568	368 aa	Predicted RBP	6.98	□□□□□ -1.29
PRB1	YEL060C	ATH1	P48016	1211 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	UBC12	P52491	188 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	NUP100	Q02629	959 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	NSE5	Q03718	556 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YDR514C	Q04408	483 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YML083C	Q04526	418 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YLR283W	Q05867	314 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YOL131W	Q08270	108 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	DDC1	Q08949	612 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	YOL107W	Q12239	342 aa		6.98	□□□□□ -1.29
PRB1	YEL060C	CYC1	P00044	109 aa	Predicted RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	HIS1	P00498	297 aa	Known RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	FLP1	P03870	423 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	SPT3	P06844	337 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	SAM35	P14693	329 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	CNB1	P25296	175 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	PGS1	P25578	521 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YIH1	P25637	258 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	APT2	P36973	181 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	EDC3	P39998	551 aa	Known RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	ZRG8	P40021	1076 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	JHD2	P47156	728 aa	Predicted RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	MPC1	P53157	130 aa	Known RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	FMP48	P53233	369 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	LSM7	P53905	115 aa	Known RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	YDR286C	Q05530	114 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	UPC2	Q12151	913 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	SIA1	Q12212	622 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	ICT1	Q12385	394 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YDR461C-A	Q2V2P7	80 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	AFI1	Q99222	893 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	AI4	P03878	556 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	FUS1	P11710	512 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	BAR1	P12630	587 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	GAP1	P19145	602 aa	Predicted RBP	6.97	□□□□□ -1.29
PRB1	YEL060C	GUT2	P32191	649 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YER186C	P40101	306 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	MEP2	P41948	499 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YFR018C	P43599	363 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	BIT61	P47041	543 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	SHY1	P53266	389 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	NUP116	Q02630	1113 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	MSC2	Q03455	724 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YLR224W	Q05947	369 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	ASR1	Q06834	288 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
PRB1	YEL060C	ARP7	Q12406	477 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	SKM1	Q12469	655 aa		6.97	□□□□□ -1.29
PRB1	YEL060C	YBR085C-A	O43137	85 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	PET54	P10834	293 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	GAL2	P13181	574 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	GLN3	P18494	730 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	MAK5	P38112	773 aa	Predicted RBP	6.96	□□□□□ -1.3
PRB1	YEL060C	RCK1	P38622	512 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	RRF1	P38771	230 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	YFL066C	P43538	392 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	RMD8	P43620	662 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	SRB7	P47822	140 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	NBP35	P52920	328 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	SCY1	P53009	804 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	IDP3	P53982	420 aa	Known RBP	6.96	□□□□□ -1.3
PRB1	YEL060C	MTD1	Q02046	320 aa	Known RBP	6.96	□□□□□ -1.3
PRB1	YEL060C	TIF35	Q04067	274 aa	Known RBP	6.96	□□□□□ -1.3
PRB1	YEL060C	SIZ1	Q04195	904 aa		6.96	□□□□□ -1.3
PRB1	YEL060C	ATG38	Q05789	226 aa	Known RBP	6.96	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms