RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A RRP45Q05636 305 aaKnown RBP3.12□□□□□ -1.91
YDR261W-AYDR261W-A SOD1P00445 154 aaKnown RBP3.11□□□□□ -1.91
YDR261W-AYDR261W-A TRP1P00912 224 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A SPO7P18410 259 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A SNT1P25357 1226 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A LSB5P25369 354 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A SYF1Q04048 859 aaPredicted RBP3.11□□□□□ -1.91
YDR261W-AYDR261W-A TAF11Q04226 346 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A YMR027WQ04371 470 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A WTM1Q12363 437 aaKnown RBP3.11□□□□□ -1.91
YDR261W-AYDR261W-A ORT1Q12375 292 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A RTP1Q12751 981 aa3.11□□□□□ -1.91
YDR261W-AYDR261W-A RML2P32611 393 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A YBR137WP38276 179 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A MSG5P38590 489 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A NAB3P38996 802 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YDR261W-AYDR261W-A YGL138CP53122 345 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A SHY1P53266 389 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A MTM1P53320 366 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A COG4Q06096 861 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A YOL159C-AQ3E769 90 aa3.1□□□□□ -1.91
YDR261W-AYDR261W-A NFT1P0CE68 1218 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A RPS8AP0CX39 200 aaKnown RBP3.09□□□□□ -1.91
YDR261W-AYDR261W-A RPS8BP0CX40 200 aaKnown RBP3.09□□□□□ -1.91
YDR261W-AYDR261W-A SEC63P14906 663 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A CLN1P20437 546 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A REC107P21651 314 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A RHB1P25378 209 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A BEM1P29366 551 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A SIN4P32259 974 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A RSN1Q03516 953 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A YLR287CQ05881 355 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A VAM3Q12241 283 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A SFI1Q12369 946 aa3.09□□□□□ -1.91
YDR261W-AYDR261W-A KRE2P27809 442 aa3.08□□□□□ -1.92
YDR261W-AYDR261W-A POP5P28005 173 aa3.08□□□□□ -1.92
YDR261W-AYDR261W-A ERG3P32353 365 aa3.08□□□□□ -1.92
YDR261W-AYDR261W-A COS5P47187 383 aa3.08□□□□□ -1.92
YDR261W-AYDR261W-A COS7Q07788 383 aa3.08□□□□□ -1.92
YDR261W-AYDR261W-A SKI7Q08491 747 aaPredicted RBP3.08□□□□□ -1.92
YDR261W-AYDR261W-A CDC31P06704 161 aaKnown RBP3.07□□□□□ -1.92
YDR261W-AYDR261W-A MRPL10P36520 322 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A RFC3P38629 340 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A PCF11P39081 626 aaPredicted RBP3.07□□□□□ -1.92
YDR261W-AYDR261W-A AZR1P50080 613 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A PHB2P50085 310 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A MDM1Q01846 1127 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A IRC25Q07951 179 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A YRM1Q12340 786 aa3.07□□□□□ -1.92
YDR261W-AYDR261W-A HIR2P32480 875 aa3.06□□□□□ -1.92
YDR261W-AYDR261W-A YME2P32843 850 aa3.06□□□□□ -1.92
YDR261W-AYDR261W-A PRS1P32895 427 aaKnown RBP3.06□□□□□ -1.92
YDR261W-AYDR261W-A GPD2P41911 440 aaKnown RBP3.06□□□□□ -1.92
YDR261W-AYDR261W-A MDM30Q05930 598 aa3.06□□□□□ -1.92
YDR261W-AYDR261W-A RMD5Q12508 421 aa3.06□□□□□ -1.92
YDR261W-AYDR261W-A YRF1-4O13559 1382 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A ILV5P06168 395 aaKnown RBP3.05□□□□□ -1.92
YDR261W-AYDR261W-A CTR86P25355 563 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A SMY1P32364 656 aaKnown RBP3.05□□□□□ -1.92
YDR261W-AYDR261W-A SOR1P35497 357 aaKnown RBP3.05□□□□□ -1.92
YDR261W-AYDR261W-A JNM1P36224 373 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A MMS4P38257 691 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A NOC2P39744 710 aaKnown RBP3.05□□□□□ -1.92
YDR261W-AYDR261W-A RHO5P53879 331 aaKnown RBP3.05□□□□□ -1.92
YDR261W-AYDR261W-A SKO1Q02100 647 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A SOR2Q07786 357 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A FDH1Q08911 376 aa3.05□□□□□ -1.92
YDR261W-AYDR261W-A CYC3P06182 269 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A NAM2P11325 894 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A NAT1P12945 854 aaKnown RBP3.04□□□□□ -1.92
YDR261W-AYDR261W-A FUR1P18562 216 aaKnown RBP3.04□□□□□ -1.92
YDR261W-AYDR261W-A APE3P37302 537 aaKnown RBP3.04□□□□□ -1.92
YDR261W-AYDR261W-A SSU1P41930 458 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A GPI15P53961 229 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A HAL1Q01766 294 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A OAZ1Q02803 292 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A GIP3Q03016 1276 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A TAF12Q03761 539 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A YMR155WQ03795 547 aa3.04□□□□□ -1.92
YDR261W-AYDR261W-A RKM1Q08961 583 aaPredicted RBP3.04□□□□□ -1.92
YDR261W-AYDR261W-A SCEIP03882 235 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A PCL1P24867 279 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A NPL6P32832 435 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A SWE1P32944 819 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A UTH1P36135 365 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A YHR131CP38835 850 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A SRB7P47822 140 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A ADA2Q02336 434 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A ARX1Q03862 593 aaKnown RBP3.03□□□□□ -1.92
YDR261W-AYDR261W-A TSA2Q04120 196 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A BCH1Q05029 724 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A DON1Q05610 365 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A DIS3Q08162 1001 aaKnown RBP3.03□□□□□ -1.92
YDR261W-AYDR261W-A RRG1Q12167 365 aaPredicted RBP3.03□□□□□ -1.92
YDR261W-AYDR261W-A SCM3Q12334 223 aa3.03□□□□□ -1.92
YDR261W-AYDR261W-A PGA3Q12746 312 aaKnown RBP3.03□□□□□ -1.92
YDR261W-AYDR261W-A HOM3P10869 527 aa3.02□□□□□ -1.93
YDR261W-AYDR261W-A SPO12P17123 173 aa3.02□□□□□ -1.93
YDR261W-AYDR261W-A YCR051WP25631 222 aa3.02□□□□□ -1.93
YDR261W-AYDR261W-A KAR9P32526 644 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms