RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR220CYDR220C TIM17P39515 158 aa2.41□□□□□ -2.02
YDR220CYDR220C VMA13P41807 478 aaKnown RBP2.41□□□□□ -2.02
YDR220CYDR220C TFG2P41896 400 aaPredicted RBP2.41□□□□□ -2.02
YDR220CYDR220C IRC6P43615 237 aa2.41□□□□□ -2.02
YDR220CYDR220C RMD9P53140 646 aaKnown RBP2.41□□□□□ -2.02
YDR220CYDR220C PSK1P31374 1356 aa2.4□□□□□ -2.02
YDR220CYDR220C SPB1P25582 841 aaPredicted RBP2.4□□□□□ -2.03
YDR220CYDR220C AFG1P32317 509 aa2.4□□□□□ -2.03
YDR220CYDR220C PRP21P32524 280 aaPredicted RBP2.4□□□□□ -2.03
YDR220CYDR220C REC114P32841 428 aa2.4□□□□□ -2.03
YDR220CYDR220C SPT10P35208 640 aa2.4□□□□□ -2.03
YDR220CYDR220C MRPS9P38120 278 aa2.4□□□□□ -2.03
YDR220CYDR220C SMF1P38925 575 aa2.4□□□□□ -2.03
YDR220CYDR220C DFG10P40526 253 aa2.4□□□□□ -2.03
YDR220CYDR220C YGR149WP48236 432 aa2.4□□□□□ -2.03
YDR220CYDR220C YNR048WP53740 393 aa2.4□□□□□ -2.03
YDR220CYDR220C BUD21Q08492 214 aaPredicted RBP2.4□□□□□ -2.03
YDR220CYDR220C GPH1P06738 902 aaKnown RBP2.39□□□□□ -2.03
YDR220CYDR220C GPI10P30777 616 aa2.39□□□□□ -2.03
YDR220CYDR220C HIR2P32480 875 aa2.39□□□□□ -2.03
YDR220CYDR220C RML2P32611 393 aa2.39□□□□□ -2.03
YDR220CYDR220C ESL1P40456 1118 aa2.39□□□□□ -2.03
YDR220CYDR220C HSP31Q04432 237 aa2.39□□□□□ -2.03
YDR220CYDR220C VTA1Q06263 330 aa2.39□□□□□ -2.03
YDR220CYDR220C TEF1P02994 458 aaKnown RBP2.38□□□□□ -2.03
YDR220CYDR220C SPS4P09937 338 aa2.38□□□□□ -2.03
YDR220CYDR220C CLC1P17891 233 aa2.38□□□□□ -2.03
YDR220CYDR220C SMY1P32364 656 aaKnown RBP2.38□□□□□ -2.03
YDR220CYDR220C OTU2P38747 307 aaKnown RBP2.38□□□□□ -2.03
YDR220CYDR220C NAB3P38996 802 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YDR220CYDR220C VTC2P43585 828 aa2.38□□□□□ -2.03
YDR220CYDR220C PGU1P47180 361 aa2.38□□□□□ -2.03
YDR220CYDR220C YGR018CP53211 109 aa2.38□□□□□ -2.03
YDR220CYDR220C MRPL19P53875 158 aa2.38□□□□□ -2.03
YDR220CYDR220C MRPS16Q02608 121 aa2.38□□□□□ -2.03
YDR220CYDR220C TSR2Q06672 205 aaKnown RBP2.38□□□□□ -2.03
YDR220CYDR220C YLR278CQ05854 1341 aa2.38□□□□□ -2.03
YDR220CYDR220C MET17P06106 444 aa2.37□□□□□ -2.03
YDR220CYDR220C RIP1P08067 215 aa2.37□□□□□ -2.03
YDR220CYDR220C ROX1P25042 368 aa2.37□□□□□ -2.03
YDR220CYDR220C APE2P32454 952 aaKnown RBP2.37□□□□□ -2.03
YDR220CYDR220C RTC2P38279 296 aa2.37□□□□□ -2.03
YDR220CYDR220C RFC3P38629 340 aa2.37□□□□□ -2.03
YDR220CYDR220C ECM27P47144 725 aa2.37□□□□□ -2.03
YDR220CYDR220C DSL1P53847 754 aa2.37□□□□□ -2.03
YDR220CYDR220C SUB1P54000 292 aaKnown RBP2.37□□□□□ -2.03
YDR220CYDR220C TIM10P87108 93 aa2.37□□□□□ -2.03
YDR220CYDR220C LIP2Q06005 328 aa2.37□□□□□ -2.03
YDR220CYDR220C ADH1P00330 348 aaKnown RBP2.36□□□□□ -2.03
YDR220CYDR220C SEC63P14906 663 aa2.36□□□□□ -2.03
YDR220CYDR220C IDH2P28241 369 aaKnown RBP2.36□□□□□ -2.03
YDR220CYDR220C IES6P32617 166 aa2.36□□□□□ -2.03
YDR220CYDR220C NIP100P33420 868 aa2.36□□□□□ -2.03
YDR220CYDR220C YJR011CP47086 261 aaPredicted RBP2.36□□□□□ -2.03
YDR220CYDR220C MDE1P47095 244 aa2.36□□□□□ -2.03
YDR220CYDR220C FMS1P50264 508 aa2.36□□□□□ -2.03
YDR220CYDR220C ADA2Q02336 434 aa2.36□□□□□ -2.03
YDR220CYDR220C SYF1Q04048 859 aaPredicted RBP2.36□□□□□ -2.03
YDR220CYDR220C HIS4P00815 799 aaKnown RBP2.35□□□□□ -2.03
YDR220CYDR220C NAM2P11325 894 aa2.35□□□□□ -2.03
YDR220CYDR220C RAD57P25301 460 aa2.35□□□□□ -2.03
YDR220CYDR220C HXT3P32466 567 aaKnown RBP2.35□□□□□ -2.03
YDR220CYDR220C VHC1P38329 1120 aa2.35□□□□□ -2.03
YDR220CYDR220C LYS1P38998 373 aaRIP-Chip data2.35□□□□□ -2.03not detected
YDR220CYDR220C SAS2P40963 338 aa2.35□□□□□ -2.03
YDR220CYDR220C DLD2P46681 530 aaKnown RBP2.35□□□□□ -2.03
YDR220CYDR220C YIF1P53845 314 aaKnown RBP2.35□□□□□ -2.03
YDR220CYDR220C TAF11Q04226 346 aa2.35□□□□□ -2.03
YDR220CYDR220C DNL4Q08387 944 aaPredicted RBP2.35□□□□□ -2.03
YDR220CYDR220C SGT1Q08446 395 aa2.35□□□□□ -2.03
YDR220CYDR220C HSP42Q12329 375 aa2.35□□□□□ -2.03
YDR220CYDR220C ORT1Q12375 292 aa2.35□□□□□ -2.03
YDR220CYDR220C ARG4P04076 463 aaPredicted RBP2.34□□□□□ -2.03
YDR220CYDR220C CDC31P06704 161 aaKnown RBP2.34□□□□□ -2.03
YDR220CYDR220C RPI1P23250 407 aaKnown RBP2.34□□□□□ -2.03
YDR220CYDR220C PPH22P23595 377 aa2.34□□□□□ -2.03
YDR220CYDR220C GEX1P25596 615 aa2.34□□□□□ -2.03
YDR220CYDR220C ERG3P32353 365 aa2.34□□□□□ -2.03
YDR220CYDR220C ARA1P38115 344 aa2.34□□□□□ -2.03
YDR220CYDR220C BAT1P38891 393 aaKnown RBP2.34□□□□□ -2.03
YDR220CYDR220C JLP2P40206 208 aa2.34□□□□□ -2.03
YDR220CYDR220C NDE1P40215 560 aa2.34□□□□□ -2.03
YDR220CYDR220C AZR1P50080 613 aa2.34□□□□□ -2.03
YDR220CYDR220C RPA49Q01080 415 aaPredicted RBP2.34□□□□□ -2.03
YDR220CYDR220C AIM32Q04689 311 aa2.34□□□□□ -2.03
YDR220CYDR220C COG4Q06096 861 aa2.34□□□□□ -2.03
YDR220CYDR220C RKM1Q08961 583 aaPredicted RBP2.34□□□□□ -2.03
YDR220CYDR220C SFI1Q12369 946 aa2.34□□□□□ -2.03
YDR220CYDR220C COX4P04037 155 aa2.33□□□□□ -2.04
YDR220CYDR220C SIN4P32259 974 aa2.33□□□□□ -2.04
YDR220CYDR220C RPN12P32496 274 aa2.33□□□□□ -2.04
YDR220CYDR220C PFS2P42841 465 aaKnown RBP2.33□□□□□ -2.04
YDR220CYDR220C COS5P47187 383 aa2.33□□□□□ -2.04
YDR220CYDR220C FLC3P53121 802 aa2.33□□□□□ -2.04
YDR220CYDR220C CRH1P53301 507 aa2.33□□□□□ -2.04
YDR220CYDR220C MKC7P53379 596 aa2.33□□□□□ -2.04
YDR220CYDR220C NUP116Q02630 1113 aa2.33□□□□□ -2.04
YDR220CYDR220C YLR287CQ05881 355 aa2.33□□□□□ -2.04
YDR220CYDR220C COS7Q07788 383 aa2.33□□□□□ -2.04
YDR220CYDR220C SKI7Q08491 747 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms