RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C SSU1P41930 458 aa1.66□□□□□ -2.14
SWI5YDR146C CAK1P43568 368 aaPredicted RBP1.66□□□□□ -2.14
SWI5YDR146C YGL138CP53122 345 aa1.66□□□□□ -2.14
SWI5YDR146C FRE4P53746 719 aa1.66□□□□□ -2.14
SWI5YDR146C YIF1P53845 314 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C TIM18Q08749 192 aa1.66□□□□□ -2.14
SWI5YDR146C YPL199CQ08954 240 aa1.66□□□□□ -2.14
SWI5YDR146C PKH2Q12236 1081 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C HSP42Q12329 375 aa1.66□□□□□ -2.14
SWI5YDR146C AFI1Q99222 893 aa1.66□□□□□ -2.14
SWI5YDR146C ADE4P04046 510 aaKnown RBP1.65□□□□□ -2.15
SWI5YDR146C CLN1P20437 546 aa1.65□□□□□ -2.15
SWI5YDR146C ISY1P21374 235 aaPredicted RBP1.65□□□□□ -2.15
SWI5YDR146C RAD57P25301 460 aa1.65□□□□□ -2.15
SWI5YDR146C SLM4P38247 162 aa1.65□□□□□ -2.15
SWI5YDR146C LAM5P43560 674 aa1.65□□□□□ -2.15
SWI5YDR146C PHO86P46956 311 aa1.65□□□□□ -2.15
SWI5YDR146C YGL242CP53066 181 aa1.65□□□□□ -2.15
SWI5YDR146C RPT4P53549 437 aaKnown RBP1.65□□□□□ -2.15
SWI5YDR146C RMT2Q03305 412 aa1.65□□□□□ -2.15
SWI5YDR146C URH1Q04179 340 aa1.65□□□□□ -2.15
SWI5YDR146C PBA1Q05778 276 aa1.65□□□□□ -2.15
SWI5YDR146C SNT309Q06091 175 aaPredicted RBP1.65□□□□□ -2.15
SWI5YDR146C ARG4P04076 463 aaPredicted RBP1.64□□□□□ -2.15
SWI5YDR146C SPO12P17123 173 aa1.64□□□□□ -2.15
SWI5YDR146C URA4P20051 364 aa1.64□□□□□ -2.15
SWI5YDR146C REC107P21651 314 aa1.64□□□□□ -2.15
SWI5YDR146C CPR2P23285 205 aa1.64□□□□□ -2.15
SWI5YDR146C ERV1P27882 189 aa1.64□□□□□ -2.15
SWI5YDR146C SER3P40054 469 aa1.64□□□□□ -2.15
SWI5YDR146C YPS6P40583 537 aa1.64□□□□□ -2.15
SWI5YDR146C TOF1P53840 1238 aa1.64□□□□□ -2.15
SWI5YDR146C GIP3Q03016 1276 aa1.64□□□□□ -2.15
SWI5YDR146C RRN11Q04712 507 aa1.64□□□□□ -2.15
SWI5YDR146C DCS1Q06151 350 aa1.64□□□□□ -2.15
SWI5YDR146C DIS3Q08162 1001 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C FDH1Q08911 376 aa1.64□□□□□ -2.15
SWI5YDR146C SRL2Q12020 392 aa1.64□□□□□ -2.15
SWI5YDR146C TY1B-AO13527 1196 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C TEF1P02994 458 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C ARO2P28777 376 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C KAR9P32526 644 aa1.64□□□□□ -2.15
SWI5YDR146C RIB5P38145 238 aa1.64□□□□□ -2.15
SWI5YDR146C SDS24P38314 527 aa1.64□□□□□ -2.15
SWI5YDR146C PRM5P40476 318 aa1.64□□□□□ -2.15
SWI5YDR146C YGR210CP42942 411 aa1.64□□□□□ -2.15
SWI5YDR146C HMS2P47175 358 aa1.64□□□□□ -2.15
SWI5YDR146C BTN2P53286 410 aa1.64□□□□□ -2.15
SWI5YDR146C MTM1P53320 366 aa1.64□□□□□ -2.15
SWI5YDR146C GOR1P53839 350 aa1.64□□□□□ -2.15
SWI5YDR146C OCA2P53949 197 aa1.64□□□□□ -2.15
SWI5YDR146C RSN1Q03516 953 aa1.64□□□□□ -2.15
SWI5YDR146C RPN9Q04062 393 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C TSR1Q07381 788 aaKnown RBP1.64□□□□□ -2.15
SWI5YDR146C YLR108CQ12259 485 aa1.64□□□□□ -2.15
SWI5YDR146C HHF1P02309 103 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C SUP35P05453 685 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C CYC3P06182 269 aa1.63□□□□□ -2.15
SWI5YDR146C ARO3P14843 370 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C CDC60P26637 1090 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C BRF1P29056 596 aa1.63□□□□□ -2.15
SWI5YDR146C SDH3P33421 198 aa1.63□□□□□ -2.15
SWI5YDR146C YBL059WP34224 193 aa1.63□□□□□ -2.15
SWI5YDR146C SWH1P35845 1188 aa1.63□□□□□ -2.15
SWI5YDR146C KKQ8P36004 724 aa1.63□□□□□ -2.15
SWI5YDR146C RRN10P38204 145 aa1.63□□□□□ -2.15
SWI5YDR146C MSG5P38590 489 aa1.63□□□□□ -2.15
SWI5YDR146C RRP4P38792 359 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C VHS2P40463 436 aa1.63□□□□□ -2.15
SWI5YDR146C CHS6P40955 746 aa1.63□□□□□ -2.15
SWI5YDR146C HOT1Q03213 719 aa1.63□□□□□ -2.15
SWI5YDR146C PPM1Q04081 328 aa1.63□□□□□ -2.15
SWI5YDR146C YMR130WQ04223 302 aa1.63□□□□□ -2.15
SWI5YDR146C UAF30Q08747 228 aa1.63□□□□□ -2.15
SWI5YDR146C MUM3Q08750 479 aa1.63□□□□□ -2.15
SWI5YDR146C ATG34Q12292 412 aa1.63□□□□□ -2.15
SWI5YDR146C IMA3P0CW40 589 aa1.63□□□□□ -2.15
SWI5YDR146C IMA4P0CW41 589 aa1.63□□□□□ -2.15
SWI5YDR146C RPS8AP0CX39 200 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C RPS8BP0CX40 200 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C SLY1P22213 666 aa1.63□□□□□ -2.15
SWI5YDR146C SPR1P32603 445 aa1.63□□□□□ -2.15
SWI5YDR146C ASC1P38011 319 aaKnown RBP1.63□□□□□ -2.15
SWI5YDR146C JLP2P40206 208 aa1.63□□□□□ -2.15
SWI5YDR146C YML6P51998 286 aa1.63□□□□□ -2.15
SWI5YDR146C AIM32Q04689 311 aa1.63□□□□□ -2.15
SWI5YDR146C IMA2Q08295 589 aa1.63□□□□□ -2.15
SWI5YDR146C MED2Q12124 431 aa1.63□□□□□ -2.15
SWI5YDR146C MTR10Q99189 972 aa1.63□□□□□ -2.15
SWI5YDR146C TRP1P00912 224 aa1.62□□□□□ -2.15
SWI5YDR146C MDH1P17505 334 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SWI5YDR146C DEG1P31115 442 aaKnown RBP1.62□□□□□ -2.15
SWI5YDR146C TFB1P32776 642 aa1.62□□□□□ -2.15
SWI5YDR146C SWD3P38123 315 aa1.62□□□□□ -2.15
SWI5YDR146C MMS4P38257 691 aa1.62□□□□□ -2.15
SWI5YDR146C MTC6P38849 526 aa1.62□□□□□ -2.15
SWI5YDR146C STN1P38960 494 aa1.62□□□□□ -2.15
SWI5YDR146C PCF11P39081 626 aaPredicted RBP1.62□□□□□ -2.15
SWI5YDR146C SIM1P40472 476 aa1.62□□□□□ -2.15
SWI5YDR146C ZIM17P42844 174 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms