RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C FMP42Q04991 504 aa3.81□□□□□ -1.8
SHU2YDR078C DBP9Q06218 594 aaKnown RBP3.81□□□□□ -1.8
SHU2YDR078C YFH1Q07540 174 aa3.81□□□□□ -1.8
SHU2YDR078C SNA4Q07549 140 aa3.81□□□□□ -1.8
SHU2YDR078C REX4Q08237 289 aa3.81□□□□□ -1.8
SHU2YDR078C YDR061WQ12298 539 aa3.81□□□□□ -1.8
SHU2YDR078C YAR066WP0CX18 203 aa3.8□□□□□ -1.8
SHU2YDR078C YHR214WP0CX19 203 aa3.8□□□□□ -1.8
SHU2YDR078C YCR100CP25606 316 aa3.8□□□□□ -1.8
SHU2YDR078C SMI1P32566 505 aa3.8□□□□□ -1.8
SHU2YDR078C PCF11P39081 626 aaPredicted RBP3.8□□□□□ -1.8
SHU2YDR078C YND1P40009 630 aa3.8□□□□□ -1.8
SHU2YDR078C CHS6P40955 746 aa3.8□□□□□ -1.8
SHU2YDR078C FYV8P46949 817 aaKnown RBP3.8□□□□□ -1.8
SHU2YDR078C PIB2P53191 635 aa3.8□□□□□ -1.8
SHU2YDR078C GPI15P53961 229 aa3.8□□□□□ -1.8
SHU2YDR078C ARK1P53974 638 aa3.8□□□□□ -1.8
SHU2YDR078C ODC1Q03028 310 aa3.8□□□□□ -1.8
SHU2YDR078C URH1Q04179 340 aa3.8□□□□□ -1.8
SHU2YDR078C SGT1Q08446 395 aa3.8□□□□□ -1.8
SHU2YDR078C YLL056CQ12177 298 aa3.8□□□□□ -1.8
SHU2YDR078C ILV5P06168 395 aaKnown RBP3.79□□□□□ -1.8
SHU2YDR078C RAD57P25301 460 aa3.79□□□□□ -1.8
SHU2YDR078C RPS0AP32905 252 aaKnown RBP3.79□□□□□ -1.8
SHU2YDR078C RRP1P35178 278 aaPredicted RBP3.79□□□□□ -1.8
SHU2YDR078C RIM2P38127 377 aa3.79□□□□□ -1.8
SHU2YDR078C LYS1P38998 373 aaRIP-Chip data3.79□□□□□ -1.8 RIP-Chip
SHU2YDR078C MET30P39014 640 aa3.79□□□□□ -1.8
SHU2YDR078C HAT2P39984 401 aa3.79□□□□□ -1.8
SHU2YDR078C HMS2P47175 358 aa3.79□□□□□ -1.8
SHU2YDR078C HCR1Q05775 265 aaKnown RBP3.79□□□□□ -1.8
SHU2YDR078C SNT309Q06091 175 aaPredicted RBP3.79□□□□□ -1.8
SHU2YDR078C NSE1Q07913 336 aa3.79□□□□□ -1.8
SHU2YDR078C SRL1Q08673 210 aa3.79□□□□□ -1.8
SHU2YDR078C ATG34Q12292 412 aa3.79□□□□□ -1.8
SHU2YDR078C ORT1Q12375 292 aa3.79□□□□□ -1.8
SHU2YDR078C MRS3P10566 314 aa3.78□□□□□ -1.8
SHU2YDR078C CDC23P16522 626 aa3.78□□□□□ -1.8
SHU2YDR078C TRX1P22217 103 aaKnown RBP3.78□□□□□ -1.8
SHU2YDR078C YCR022CP25620 114 aa3.78□□□□□ -1.8
SHU2YDR078C PHO91P27514 894 aa3.78□□□□□ -1.8
SHU2YDR078C CRM1P30822 1084 aaKnown RBP3.78□□□□□ -1.8
SHU2YDR078C NDI1P32340 513 aa3.78□□□□□ -1.8
SHU2YDR078C NDC1P32500 655 aa3.78□□□□□ -1.8
SHU2YDR078C YEL043WP32618 956 aa3.78□□□□□ -1.8
SHU2YDR078C PTR2P32901 601 aa3.78□□□□□ -1.8
SHU2YDR078C BZZ1P38822 633 aa3.78□□□□□ -1.8
SHU2YDR078C POP2P39008 433 aa3.78□□□□□ -1.8
SHU2YDR078C SHO1P40073 367 aa3.78□□□□□ -1.8
SHU2YDR078C GCD10P41814 478 aa3.78□□□□□ -1.8
SHU2YDR078C BRO1P48582 844 aa3.78□□□□□ -1.8
SHU2YDR078C ASN2P49090 572 aaKnown RBP3.78□□□□□ -1.8
SHU2YDR078C ROG1P53118 685 aa3.78□□□□□ -1.8
SHU2YDR078C SKI7Q08491 747 aaPredicted RBP3.78□□□□□ -1.8
SHU2YDR078C RGT2Q12300 763 aa3.78□□□□□ -1.8
SHU2YDR078C PSY3Q12318 242 aa3.78□□□□□ -1.8
SHU2YDR078C RMD5Q12508 421 aa3.78□□□□□ -1.8
SHU2YDR078C SRN2Q99176 213 aa3.78□□□□□ -1.8
SHU2YDR078C CDC21P06785 304 aa3.77□□□□□ -1.81
SHU2YDR078C IMA3P0CW40 589 aa3.77□□□□□ -1.81
SHU2YDR078C IMA4P0CW41 589 aa3.77□□□□□ -1.81
SHU2YDR078C MTF1P14908 341 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C UBA1P22515 1024 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C LSB5P25369 354 aa3.77□□□□□ -1.81
SHU2YDR078C SEC1P30619 724 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C FAA1P30624 700 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C CYS4P32582 507 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C NRP1P32770 719 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SHU2YDR078C QDR3P38227 689 aa3.77□□□□□ -1.81
SHU2YDR078C INM1P38710 295 aa3.77□□□□□ -1.81
SHU2YDR078C ALG8P40351 577 aa3.77□□□□□ -1.81
SHU2YDR078C NAS2P40555 220 aa3.77□□□□□ -1.81
SHU2YDR078C PAC11P40960 533 aa3.77□□□□□ -1.81
SHU2YDR078C AVT4P50944 713 aa3.77□□□□□ -1.81
SHU2YDR078C YIP5P53108 310 aa3.77□□□□□ -1.81
SHU2YDR078C YNR048WP53740 393 aa3.77□□□□□ -1.81
SHU2YDR078C FRE4P53746 719 aa3.77□□□□□ -1.81
SHU2YDR078C PDR16P53860 351 aaKnown RBP3.77□□□□□ -1.81
SHU2YDR078C MRP51Q02950 344 aa3.77□□□□□ -1.81
SHU2YDR078C IMA2Q08295 589 aa3.77□□□□□ -1.81
SHU2YDR078C YPR022CQ12139 1133 aa3.77□□□□□ -1.81
SHU2YDR078C CYB2P00175 591 aa3.76□□□□□ -1.81
SHU2YDR078C ARG4P04076 463 aaPredicted RBP3.76□□□□□ -1.81
SHU2YDR078C CHS1P08004 1131 aa3.76□□□□□ -1.81
SHU2YDR078C NFT1P0CE68 1218 aa3.76□□□□□ -1.81
SHU2YDR078C PRP16P15938 1071 aaPredicted RBP3.76□□□□□ -1.81
SHU2YDR078C TIP1P27654 210 aaPredicted RBP3.76□□□□□ -1.81
SHU2YDR078C GLC7P32598 312 aaKnown RBP3.76□□□□□ -1.81
SHU2YDR078C STP2P38704 541 aa3.76□□□□□ -1.81
SHU2YDR078C RTT107P38850 1070 aa3.76□□□□□ -1.81
SHU2YDR078C YER079WP40052 210 aaKnown RBP3.76□□□□□ -1.81
SHU2YDR078C RRT5P43607 289 aa3.76□□□□□ -1.81
SHU2YDR078C RTT101P47050 842 aa3.76□□□□□ -1.81
SHU2YDR078C SSN8P47821 323 aa3.76□□□□□ -1.81
SHU2YDR078C RSN1Q03516 953 aa3.76□□□□□ -1.81
SHU2YDR078C IPK1Q06667 281 aa3.76□□□□□ -1.81
SHU2YDR078C PML1Q07930 204 aaPredicted RBP3.76□□□□□ -1.81
SHU2YDR078C DST1P07273 309 aa3.75□□□□□ -1.81
SHU2YDR078C ATR1P13090 542 aa3.75□□□□□ -1.81
SHU2YDR078C SPO12P17123 173 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms