RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeast

Gene CKS1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKS1	YBR135W	LTV1	P34078	463 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	BZZ1	P38822	633 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	YJL055W	P47044	245 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	ECM27	P47144	725 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	TOM22	P49334	152 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	YGR111W	P53265	400 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	RPT4	P53549	437 aa	Known RBP	4.61	□□□□□ -1.67
CKS1	YBR135W	MPS1	P54199	764 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	RPM2	Q02773	1202 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	ERO1	Q03103	563 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	YMR130W	Q04223	302 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	GYL1	Q04322	720 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	HSP31	Q04432	237 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	DCS1	Q06151	350 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	PAR32	Q12515	295 aa	Known RBP	4.61	□□□□□ -1.67
CKS1	YBR135W	CTF3	Q12748	733 aa		4.61	□□□□□ -1.67
CKS1	YBR135W	MNE1	P24720	663 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	SEC1	P30619	724 aa	Known RBP	4.6	□□□□□ -1.67
CKS1	YBR135W	TMT1	P32643	299 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	RIM2	P38127	377 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	SER3	P40054	469 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	IRC15	Q02733	499 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	HCR1	Q05775	265 aa	Known RBP	4.6	□□□□□ -1.67
CKS1	YBR135W	VPS74	Q06385	345 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	UAF30	Q08747	228 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	VPS54	Q12071	889 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	SPE3	Q12074	293 aa	Known RBP	4.6	□□□□□ -1.67
CKS1	YBR135W	MED2	Q12124	431 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	TY4B-H	P0C2J7	1802 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	TY4B-J	P47024	1803 aa		4.6	□□□□□ -1.67
CKS1	YBR135W	RHB1	P25378	209 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	SWI3	P32591	825 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	RPS0A	P32905	252 aa	Known RBP	4.59	□□□□□ -1.67
CKS1	YBR135W	MDL1	P33310	695 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	MMS4	P38257	691 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	SAS2	P40963	338 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	IKS1	P47042	667 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	NUP53	Q03790	475 aa		4.59	□□□□□ -1.67
CKS1	YBR135W	HEL2	Q05580	639 aa	Known RBP	4.59	□□□□□ -1.67
CKS1	YBR135W	DIS3	Q08162	1001 aa	Known RBP	4.59	□□□□□ -1.67
CKS1	YBR135W	SCEI	P03882	235 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	MRS3	P10566	314 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	APE4	P38821	490 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	ELP2	P42935	788 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	YJL132W	P47014	750 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	YJR011C	P47086	261 aa	Predicted RBP	4.58	□□□□□ -1.68
CKS1	YBR135W	DSL1	P53847	754 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	ICT1	Q12385	394 aa		4.58	□□□□□ -1.68
CKS1	YBR135W	PSK1	P31374	1356 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	TY1B-A	O13527	1196 aa	Known RBP	4.57	□□□□□ -1.68
CKS1	YBR135W	SPO7	P18410	259 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	ECM25	P32525	599 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	GDI1	P39958	451 aa	Known RBP	4.57	□□□□□ -1.68
CKS1	YBR135W	HAT2	P39984	401 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	SAD1	P43589	448 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	TRS85	P46944	698 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	GWT1	P47026	490 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	LSC1	P53598	329 aa	Known RBP	4.57	□□□□□ -1.68
CKS1	YBR135W	YDR387C	Q04162	555 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	RPN5	Q12250	445 aa	Known RBP	4.57	□□□□□ -1.68
CKS1	YBR135W	MTR10	Q99189	972 aa		4.57	□□□□□ -1.68
CKS1	YBR135W	ADE6	P38972	1358 aa	Known RBP	4.56	□□□□□ -1.68
CKS1	YBR135W	YCR022C	P25620	114 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	PUP2	P32379	260 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	APE2	P32454	952 aa	Known RBP	4.56	□□□□□ -1.68
CKS1	YBR135W	NDC1	P32500	655 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	PTR2	P32901	601 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	SOR1	P35497	357 aa	Known RBP	4.56	□□□□□ -1.68
CKS1	YBR135W	FRE2	P36033	711 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	RXT2	P38255	430 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	YHR054C	P38780	354 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	ISC1	P40015	477 aa	Known RBP	4.56	□□□□□ -1.68
CKS1	YBR135W	SEC28	P40509	296 aa	Known RBP	4.56	□□□□□ -1.68
CKS1	YBR135W	EFM4	P40516	257 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	OCA2	P53949	197 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	ARK1	P53974	638 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	SOR2	Q07786	357 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	DCI1	Q08558	271 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	AEP3	Q12089	606 aa		4.56	□□□□□ -1.68
CKS1	YBR135W	HIS4	P00815	799 aa	Known RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	LPD1	P09624	499 aa	Known RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	RPI1	P23250	407 aa	Known RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	RRP7	P25368	297 aa	Predicted RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	NIP1	P32497	812 aa	Known RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	VHS2	P40463	436 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	RTT101	P47050	842 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	PCP1	P53259	346 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	YIF1	P53845	314 aa	Known RBP	4.55	□□□□□ -1.68
CKS1	YBR135W	PNG1	Q02890	363 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	YLR456W	Q06199	204 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	DAP1	Q12091	152 aa		4.55	□□□□□ -1.68
CKS1	YBR135W	ROM2	P51862	1356 aa	Known RBP	4.54	□□□□□ -1.68
CKS1	YBR135W	COX3	P00420	269 aa		4.54	□□□□□ -1.68
CKS1	YBR135W	ARO3	P14843	370 aa	Known RBP	4.54	□□□□□ -1.68
CKS1	YBR135W	MTF1	P14908	341 aa	Known RBP	4.54	□□□□□ -1.68
CKS1	YBR135W	SPC110	P32380	944 aa		4.54	□□□□□ -1.68
CKS1	YBR135W	SWH1	P35845	1188 aa		4.54	□□□□□ -1.68
CKS1	YBR135W	RSM22	P36056	628 aa		4.54	□□□□□ -1.68
CKS1	YBR135W	HEL1	P36113	551 aa		4.54	□□□□□ -1.68
CKS1	YBR135W	YCR041W	P37265	110 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms