RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SLC4A7Q9Y6M7 1214 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 MUC3AQ02505 3323 aa16.93■□□□□ 0.3
USB1-210ENST00000565151 COL4A4P53420 1690 aaPredicted RBP16.92■□□□□ 0.3
USB1-210ENST00000565151 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 STXBP3O00186 592 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 ZBTB43O43298 467 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 FIBPO43427 364 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 STAM2O75886 525 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 PFKMP08237 780 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 FOSL2P15408 326 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 KCNA2P16389 499 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 RFC2P35250 354 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 ADD1P35611 737 aaKnown RBP16.92■□□□□ 0.3
USB1-210ENST00000565151 APOBRQ0VD83 1088 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 BFSP2Q13515 415 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 RTN1Q16799 776 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 ZNF618Q5T7W0 954 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 METTL7BQ6UX53 244 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 TMCO2Q7Z6W1 182 aaPredicted RBP16.92■□□□□ 0.3
USB1-210ENST00000565151 RETREG2Q8NC44 543 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 CYP2W1Q8TAV3 490 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 AFAP1L1Q8TED9 768 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 NOD1Q9Y239 953 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
USB1-210ENST00000565151 V9GY48 417 aaPredicted RBP16.92■□□□□ 0.3
USB1-210ENST00000565151 EVPLQ92817 2033 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 ZBBXA8MT70 800 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 H3BRB1 525 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 CXCL10P02778 98 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 SMIM10L2AP0DMW4 78 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 SMIM10L2BP0DMW5 78 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 SELPP16109 830 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 PTK7Q13308 1070 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 CAGE1Q8TC20 777 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 CUL5Q93034 780 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
USB1-210ENST00000565151 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
USB1-210ENST00000565151 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
USB1-210ENST00000565151 MYH9P35579 1960 aaKnown RBP16.9■□□□□ 0.3
USB1-210ENST00000565151 GSTTP1A0A1W2PQM5 241 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 TREHO43280 583 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 ATP2A2P16615 1042 aaKnown RBP16.9■□□□□ 0.3
USB1-210ENST00000565151 ADAM17P78536 824 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 SP4Q02446 784 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 XRRA1Q6P2D8 792 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 Q6ZUG5 572 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 SERINC5Q86VE9 423 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
USB1-210ENST00000565151 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
USB1-210ENST00000565151 SENP7Q9BQF6 1050 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 FTOQ9C0B1 505 aaKnown RBP eCLIP16.9■□□□□ 0.3
USB1-210ENST00000565151 PRDM6Q9NQX0 595 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 TMEM260Q9NX78 707 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
USB1-210ENST00000565151 EPOPA6NHQ4 379 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 GOLGA8AA7E2F4 631 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 GOLGA8BA8MQT2 603 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 DLL1O00548 723 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 CLK2P49760 499 aaKnown RBP16.89■□□□□ 0.29
USB1-210ENST00000565151 DEFB103AP81534 67 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
USB1-210ENST00000565151 NEDD9Q14511 834 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 KRT32Q14532 448 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 RAB30Q15771 203 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
USB1-210ENST00000565151 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
USB1-210ENST00000565151 MSRAQ9UJ68 235 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 NID2Q14112 1375 aa16.89■□□□□ 0.29
USB1-210ENST00000565151 ATG2AQ2TAZ0 1938 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 RFXAPO00287 272 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 WDR5P61964 334 aaKnown RBP16.88■□□□□ 0.29
USB1-210ENST00000565151 PKN1Q16512 942 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
USB1-210ENST00000565151 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 BRF1Q92994 677 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 GPRASP2Q96D09 838 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 PCYT2Q99447 389 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 JADE2Q9NQC1 790 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 NLRC5Q86WI3 1866 aa16.88■□□□□ 0.29
USB1-210ENST00000565151 CUL9Q8IWT3 2517 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 PPFIA3O75145 1194 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 CA3P07451 260 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 ARP10275 920 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 NTRK3Q16288 839 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 HERC6Q8IVU3 1022 aa16.87■□□□□ 0.29
USB1-210ENST00000565151 FBXL16Q8N461 479 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms