RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 PRPHP41219 470 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 GJA9P57773 515 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NEDD9Q14511 834 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 C1orf53Q5VUE5 145 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 EGFLAMQ63HQ2 1017 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 KRT40Q6A162 431 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 RASGRP2Q7LDG7 609 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NEK9Q8TD19 979 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 FAM20AQ96MK3 541 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 RMDN3Q96TC7 470 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 RIT2Q99578 217 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 MXRA8Q9BRK3 442 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NCOA5Q9HCD5 579 aaKnown RBP7.48□□□□□ -1.21
IFT88-207ENST00000537103 VAT1LQ9HCJ6 419 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NAP1L2Q9ULW6 460 aaPredicted RBP7.48□□□□□ -1.21
IFT88-207ENST00000537103 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
IFT88-207ENST00000537103 MEIS1O00470 390 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NR3C2P08235 984 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 RXRAP19793 462 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 ACVR2BQ13705 512 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 LAMC2Q13753 1193 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 TTLL4Q14679 1199 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 DUSP28Q4G0W2 176 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 RILPL1Q5EBL4 403 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 CCDC144CPQ8IYA2 1237 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 TRIB2Q92519 343 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 PHKBQ93100 1093 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 TBC1D22BQ9NU19 505 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 OGDHLQ9ULD0 1010 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 GABRQQ9UN88 632 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 NOVA2Q9UNW9 492 aaKnown RBP7.48□□□□□ -1.21
IFT88-207ENST00000537103 PTCH2Q9Y6C5 1203 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 ZSWIM8A7E2V4 1837 aa7.48□□□□□ -1.21
IFT88-207ENST00000537103 KIAA1217Q5T5P2 1943 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 MOXD2PA6NHM9 499 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 DKC1O60832 514 aaKnown RBP eCLIP7.47□□□□□ -1.21
IFT88-207ENST00000537103 SNAI1O95863 264 aaPredicted RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 GJB1P08034 283 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 GJB2P29033 226 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 GTF2F1P35269 517 aaKnown RBP eCLIP7.47□□□□□ -1.21
IFT88-207ENST00000537103 USH1GQ495M9 461 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 TYW1BQ6NUM6 668 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 TAPT1Q6NXT6 567 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 CCDC62Q6P9F0 684 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 NEK8Q86SG6 692 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 TNPO1Q92973 898 aaKnown RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 PIF1Q9H611 641 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 DDX20Q9UHI6 824 aaKnown RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 CCDC194A0A1B0GVG4 234 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 CFBP00751 764 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 INHAP05111 366 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 ANP32AP39687 249 aaKnown RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 SLC26A2P50443 739 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 NUCB2P80303 420 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 STK3Q13188 491 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 SLC9C1Q4G0N8 1177 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 BRDTQ58F21 947 aaPredicted RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 SESTD1Q86VW0 696 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 SMAP1Q8IYB5 467 aaPredicted RBP7.47□□□□□ -1.21
IFT88-207ENST00000537103 NECAB1Q8N987 351 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 ARRDC4Q8NCT1 418 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 KLHDC9Q8NEP7 349 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 TAAR1Q96RJ0 339 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 ARHGAP39Q9C0H5 1083 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 MCOLN1Q9GZU1 580 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.47□□□□□ -1.21
IFT88-207ENST00000537103 COL20A1Q9P218 1284 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 ATP6V1DQ9Y5K8 247 aa7.47□□□□□ -1.21
IFT88-207ENST00000537103 MYH15Q9Y2K3 1946 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 CD2BP2O95400 341 aaKnown RBP7.46□□□□□ -1.21
IFT88-207ENST00000537103 GH1P01241 217 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 SFNP31947 248 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 DDIT3P35638 169 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 CPT1AP50416 773 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 CEP55Q53EZ4 464 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 ARL6IP4Q66PJ3 421 aaKnown RBP7.46□□□□□ -1.21
IFT88-207ENST00000537103 ZNF746Q6NUN9 644 aaPredicted RBP7.46□□□□□ -1.21
IFT88-207ENST00000537103 NOSTRINQ8IVI9 506 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 DIS3L2Q8IYB7 885 aaKnown RBP7.46□□□□□ -1.21
IFT88-207ENST00000537103 PCSK9Q8NBP7 692 aaKnown RBP7.46□□□□□ -1.21
IFT88-207ENST00000537103 SLC5A5Q92911 643 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 WDR11Q9BZH6 1224 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 SPC25Q9HBM1 224 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 VPS54Q9P1Q0 977 aa7.46□□□□□ -1.21
IFT88-207ENST00000537103 DNM1LO00429 736 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 NDUFV2P19404 249 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 GJA8P48165 433 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 KRT76Q01546 638 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 CACNB2Q08289 660 aaPredicted RBP7.46□□□□□ -1.22
IFT88-207ENST00000537103 GPKOWQ92917 476 aaPredicted RBP eCLIP7.46□□□□□ -1.22
IFT88-207ENST00000537103 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 CPVLQ9H3G5 476 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 PRKAG2Q9UGJ0 569 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 ASTN1O14525 1302 aa7.46□□□□□ -1.22
IFT88-207ENST00000537103 EMSYQ7Z589 1322 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms