RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Slc4a8Q8JZR6 1089 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ttc4Q8R3H9 386 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Xrcc4Q924T3 326 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Llcfc1Q9D9P8 108 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 IdeQ9JHR7 1019 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rps6ka2Q9WUT3 733 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Synj2Q9D2G5 1434 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Osbpl9A2A8Z1 736 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Krt36B1AQ75 473 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Chil3O35744 398 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rab20P35295 233 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 FntaQ61239 377 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pacsin1Q61644 441 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Dennd2cQ6P9P8 914 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 PhkbQ7TSH2 1085 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Lyve1Q8BHC0 318 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Mtrf1lQ8BJU9 373 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 DpydQ8CHR6 1025 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Fgfr1op2Q9CRA9 253 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tlr2Q9QUN7 784 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Scgb2b7D3YYY1 112 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tex11Q14AT2 947 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Phc1Q64028 1012 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Zrsr1Q64707 428 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Lrrc41Q8K1C9 807 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pnpt1Q8K1R3 783 aaKnown RBP11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tube1Q9D6T1 475 aa11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ascc1Q9D8Z1 356 aaKnown RBP11.06□□□□□ -0.64
Lig4-201ENSMUST00000095476 Kif14L0N7N1 1674 aaKnown RBP11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rexo5D3YW29 759 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pcdhb9E9Q5G2 828 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Zfp408H7BX78 710 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 CidebO70303 219 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Srrm1Q52KI8 946 aaKnown RBP11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Lrrn2Q6PHP6 730 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Serpinb3dQ6UKZ0 387 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pls3Q99K51 630 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Q9CR55 154 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ube3bQ9ES34 1070 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Speer3W4VSP1 261 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Atp7bQ64446 1462 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Syngap1F6SEU4 1340 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Mms22lB1AUR6 1238 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Hsf3D0VYS2 492 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 VdrP48281 422 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Cops2P61202 443 aaKnown RBP11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Sh3gl1Q62419 368 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 PolnQ7TQ07 864 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 SrlQ7TQ48 910 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Dnajc6Q80TZ3 938 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Atg16l1Q8C0J2 607 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Uap1Q91YN5 522 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Gstt4Q9D4P7 240 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Slc5a4aQ9ET37 656 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Plod1Q9R0E2 728 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Zbtb7bQ64321 544 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pold4Q9CWP8 107 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tmem192Q9CXT7 266 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Batf3Q9D275 118 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Pus3Q9JI38 481 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Itga2bQ9QUM0 1033 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Gfpt2Q9Z2Z9 682 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Dot1lQ6XZL8 1540 aa11.05□□□□□ -0.64
Lig4-201ENSMUST00000095476 Krt24A1L317 512 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tada2bD3Z4Z0 420 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Anxa1P10107 346 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 ZfaP23607 742 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Nsun2Q1HFZ0 757 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Hipk4Q3V016 616 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Carmil2Q3V3V9 1296 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ttf2Q5NC05 1138 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ddx3xQ62167 662 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 GypcQ78HU7 95 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Med21Q9CQ39 144 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ubxn11Q9D572 484 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Nsmce1Q9D720 266 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rpf2Q9JJ80 306 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Entpd5Q9WUZ9 427 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Crlf3Q9Z2L7 442 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Zfyve16Q80U44 1528 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ncf1Q09014 390 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tmem109Q3UBX0 243 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Lsg1Q3UM18 644 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Fbxw10Q5SUS0 1030 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 AmphQ7TQF7 686 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Fsd1lQ8BYN5 507 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Arfip2Q8K221 341 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Nlgn1Q99K10 843 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Spata17Q9D552 379 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rgs3Q9DC04 966 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 H2-OaQ9QWV1 250 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Talpid3E9PV87 1520 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 HalP35492 657 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Rcn1Q05186 325 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Miga1Q4QQM5 600 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Bbs9Q811G0 885 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Ddx54Q8K4L0 874 aaKnown RBP11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tmem119Q8R138 280 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Tmed5Q9CXE7 229 aa11.04□□□□□ -0.64
Lig4-201ENSMUST00000095476 Nckap5lQ6GQX2 1323 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms