Protein–RNA interactions for Protein: Q8R3H9

Ttc4, Tetratricopeptide repeat protein 4, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc4Q8R3H9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ttc4Q8R3H9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Ttc4Q8R3H9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ttc4Q8R3H9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ttc4Q8R3H9 Gm25239-201ENSMUST00000174915 86 ntBASIC29.87■■■□□ 2.37
Ttc4Q8R3H9 Psd-208ENSMUST00000224556 2034 ntBASIC29.59■■■□□ 2.33
Ttc4Q8R3H9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ttc4Q8R3H9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ttc4Q8R3H9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ttc4Q8R3H9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ttc4Q8R3H9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ttc4Q8R3H9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ttc4Q8R3H9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ttc4Q8R3H9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ttc4Q8R3H9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ttc4Q8R3H9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ttc4Q8R3H9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
Ttc4Q8R3H9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.58■■■□□ 2.01
Ttc4Q8R3H9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.55■■■□□ 2
Ttc4Q8R3H9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ttc4Q8R3H9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ttc4Q8R3H9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ttc4Q8R3H9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ttc4Q8R3H9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ttc4Q8R3H9 Gm15042-201ENSMUST00000120212 883 ntBASIC27.18■■□□□ 1.94
Ttc4Q8R3H9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ttc4Q8R3H9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ttc4Q8R3H9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ttc4Q8R3H9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ttc4Q8R3H9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ttc4Q8R3H9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ttc4Q8R3H9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.91■■□□□ 1.9
Ttc4Q8R3H9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ttc4Q8R3H9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ttc4Q8R3H9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.73■■□□□ 1.87
Ttc4Q8R3H9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ttc4Q8R3H9 Gm15045-201ENSMUST00000117359 883 ntBASIC26.72■■□□□ 1.87
Ttc4Q8R3H9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ttc4Q8R3H9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.65■■□□□ 1.86
Ttc4Q8R3H9 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.63■■□□□ 1.85
Ttc4Q8R3H9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc4Q8R3H9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ttc4Q8R3H9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.61■■□□□ 1.85
Ttc4Q8R3H9 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.59■■□□□ 1.85
Ttc4Q8R3H9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ttc4Q8R3H9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc4Q8R3H9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ttc4Q8R3H9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ttc4Q8R3H9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc4Q8R3H9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ttc4Q8R3H9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ttc4Q8R3H9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ttc4Q8R3H9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.2■■□□□ 1.78
Ttc4Q8R3H9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ttc4Q8R3H9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ttc4Q8R3H9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ttc4Q8R3H9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ttc4Q8R3H9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Ttc4Q8R3H9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ttc4Q8R3H9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ttc4Q8R3H9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Ttc4Q8R3H9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ttc4Q8R3H9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ttc4Q8R3H9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ttc4Q8R3H9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Ttc4Q8R3H9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ttc4Q8R3H9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ttc4Q8R3H9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Ttc4Q8R3H9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ttc4Q8R3H9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ttc4Q8R3H9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.69■■□□□ 1.7
Ttc4Q8R3H9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ttc4Q8R3H9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ttc4Q8R3H9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ttc4Q8R3H9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ttc4Q8R3H9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ttc4Q8R3H9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ttc4Q8R3H9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ttc4Q8R3H9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ttc4Q8R3H9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.44■■□□□ 1.66
Ttc4Q8R3H9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ttc4Q8R3H9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ttc4Q8R3H9 Gm24109-201ENSMUST00000175489 103 ntBASIC25.35■■□□□ 1.65
Ttc4Q8R3H9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ttc4Q8R3H9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ttc4Q8R3H9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
Ttc4Q8R3H9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ttc4Q8R3H9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ttc4Q8R3H9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.26■■□□□ 1.63
Ttc4Q8R3H9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.24■■□□□ 1.63
Ttc4Q8R3H9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ttc4Q8R3H9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.24■■□□□ 1.63
Ttc4Q8R3H9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ttc4Q8R3H9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ttc4Q8R3H9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ttc4Q8R3H9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ttc4Q8R3H9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ttc4Q8R3H9 Gm23366-201ENSMUST00000175022 89 ntBASIC25.13■■□□□ 1.61
Ttc4Q8R3H9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ttc4Q8R3H9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms