RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C GPI8P49018 411 aa5.81□□□□□ -1.48
VPS4YPR173C RBG2P53295 368 aaKnown RBP5.81□□□□□ -1.48
VPS4YPR173C MRPL50P53724 139 aa5.81□□□□□ -1.48
VPS4YPR173C CPR8P53728 308 aa5.81□□□□□ -1.48
VPS4YPR173C EFM6P53970 246 aa5.81□□□□□ -1.48
VPS4YPR173C RRN5Q02983 363 aa5.81□□□□□ -1.48
VPS4YPR173C ECM11Q04110 302 aa5.81□□□□□ -1.48
VPS4YPR173C YDR124WQ04608 324 aa5.81□□□□□ -1.48
VPS4YPR173C YHC1Q05900 231 aaKnown RBP5.81□□□□□ -1.48
VPS4YPR173C RIF2Q06208 395 aa5.81□□□□□ -1.48
VPS4YPR173C THP1Q08231 455 aa5.81□□□□□ -1.48
VPS4YPR173C DNL4Q08387 944 aaPredicted RBP5.81□□□□□ -1.48
VPS4YPR173C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
VPS4YPR173C DDC1Q08949 612 aa5.81□□□□□ -1.48
VPS4YPR173C ATG29Q12092 213 aa5.81□□□□□ -1.48
VPS4YPR173C MRH1Q12117 320 aaPredicted RBP5.81□□□□□ -1.48
VPS4YPR173C PST2Q12335 198 aaKnown RBP5.81□□□□□ -1.48
VPS4YPR173C WTM1Q12363 437 aaKnown RBP5.81□□□□□ -1.48
VPS4YPR173C RPN6Q12377 434 aa5.81□□□□□ -1.48
VPS4YPR173C ARP7Q12406 477 aa5.81□□□□□ -1.48
VPS4YPR173C ECM29P38737 1868 aa5.81□□□□□ -1.48
VPS4YPR173C AI3P03877 415 aa5.8□□□□□ -1.48
VPS4YPR173C ADE4P04046 510 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C ARG81P05085 880 aa5.8□□□□□ -1.48
VPS4YPR173C YAP1P19880 650 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C GRR1P24814 1151 aa5.8□□□□□ -1.48
VPS4YPR173C MSS51P32335 436 aa5.8□□□□□ -1.48
VPS4YPR173C SPT14P32363 452 aa5.8□□□□□ -1.48
VPS4YPR173C ADD66P36040 267 aa5.8□□□□□ -1.48
VPS4YPR173C MAK5P38112 773 aaPredicted RBP5.8□□□□□ -1.48
VPS4YPR173C YBR242WP38331 238 aa5.8□□□□□ -1.48
VPS4YPR173C SRP72P38688 640 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C YHR045WP38775 560 aa5.8□□□□□ -1.48
VPS4YPR173C YHK8P38776 514 aa5.8□□□□□ -1.48
VPS4YPR173C IPI1P38803 334 aaPredicted RBP5.8□□□□□ -1.48
VPS4YPR173C YAP1801P38856 637 aa5.8□□□□□ -1.48
VPS4YPR173C ERV46P39727 415 aa5.8□□□□□ -1.48
VPS4YPR173C CDC1P40986 491 aa5.8□□□□□ -1.48
VPS4YPR173C GAB1P41733 394 aa5.8□□□□□ -1.48
VPS4YPR173C BST1P43571 1029 aa5.8□□□□□ -1.48
VPS4YPR173C PTR3P43606 678 aa5.8□□□□□ -1.48
VPS4YPR173C DLD2P46681 530 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C PET130P47065 347 aa5.8□□□□□ -1.48
VPS4YPR173C GCV2P49095 1034 aa5.8□□□□□ -1.48
VPS4YPR173C NCE103P53615 221 aa5.8□□□□□ -1.48
VPS4YPR173C SNF12P53628 566 aa5.8□□□□□ -1.48
VPS4YPR173C IMP4P53941 290 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C MRPL13Q02204 264 aa5.8□□□□□ -1.48
VPS4YPR173C NUP100Q02629 959 aa5.8□□□□□ -1.48
VPS4YPR173C MUK1Q02866 612 aa5.8□□□□□ -1.48
VPS4YPR173C PFA5Q03289 374 aa5.8□□□□□ -1.48
VPS4YPR173C GOT1Q03554 138 aa5.8□□□□□ -1.48
VPS4YPR173C YMR111CQ04461 462 aaPredicted RBP5.8□□□□□ -1.48
VPS4YPR173C RCO1Q04779 684 aa5.8□□□□□ -1.48
VPS4YPR173C DBP9Q06218 594 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C VTA1Q06263 330 aa5.8□□□□□ -1.48
VPS4YPR173C LDB18Q07887 179 aa5.8□□□□□ -1.48
VPS4YPR173C AVO1Q08236 1176 aa5.8□□□□□ -1.48
VPS4YPR173C PGC1Q08959 321 aa5.8□□□□□ -1.48
VPS4YPR173C SAM4Q08985 325 aaKnown RBP5.8□□□□□ -1.48
VPS4YPR173C YGK3Q12222 375 aaPredicted RBP5.8□□□□□ -1.48
VPS4YPR173C RBD2Q12270 262 aa5.8□□□□□ -1.48
VPS4YPR173C AFI1Q99222 893 aa5.8□□□□□ -1.48
VPS4YPR173C TIM9O74700 87 aa5.79□□□□□ -1.48
VPS4YPR173C HXK2P04807 486 aaKnown RBP5.79□□□□□ -1.48
VPS4YPR173C HMG1P12683 1054 aa5.79□□□□□ -1.48
VPS4YPR173C CLN1P20437 546 aa5.79□□□□□ -1.48
VPS4YPR173C OCA4P25366 362 aa5.79□□□□□ -1.48
VPS4YPR173C RHB1P25378 209 aa5.79□□□□□ -1.48
VPS4YPR173C ASF2P32448 525 aaPredicted RBP5.79□□□□□ -1.48
VPS4YPR173C FLR1P38124 548 aa5.79□□□□□ -1.48
VPS4YPR173C YHL041WP38730 149 aa5.79□□□□□ -1.48
VPS4YPR173C RIM4P38741 713 aa5.79□□□□□ -1.48
VPS4YPR173C OPT1P40897 799 aa5.79□□□□□ -1.48
VPS4YPR173C SER2P42941 309 aa5.79□□□□□ -1.48
VPS4YPR173C SPO74P45819 413 aa5.79□□□□□ -1.48
VPS4YPR173C SNG1P46950 547 aa5.79□□□□□ -1.48
VPS4YPR173C SNX4P47057 423 aa5.79□□□□□ -1.48
VPS4YPR173C NNF1P47149 201 aa5.79□□□□□ -1.48
VPS4YPR173C MRX6P48564 524 aa5.79□□□□□ -1.48
VPS4YPR173C TOM22P49334 152 aa5.79□□□□□ -1.48
VPS4YPR173C MET13P53128 600 aa5.79□□□□□ -1.48
VPS4YPR173C NQM1P53228 333 aaPredicted RBP5.79□□□□□ -1.48
VPS4YPR173C YGR266WP53326 701 aa5.79□□□□□ -1.48
VPS4YPR173C SPG3Q04398 127 aaPredicted RBP5.79□□□□□ -1.48
VPS4YPR173C RNH1Q04740 348 aa5.79□□□□□ -1.48
VPS4YPR173C HRD3Q05787 833 aa5.79□□□□□ -1.48
VPS4YPR173C RGC1Q06108 1083 aaKnown RBP5.79□□□□□ -1.48
VPS4YPR173C YLL007CQ07799 665 aa5.79□□□□□ -1.48
VPS4YPR173C ACF2Q12168 779 aa5.79□□□□□ -1.48
VPS4YPR173C PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
VPS4YPR173C RTR2Q12378 196 aa5.79□□□□□ -1.48
VPS4YPR173C PNS1Q12412 539 aa5.79□□□□□ -1.48
VPS4YPR173C YPR053CQ6Q5F3 151 aa5.79□□□□□ -1.48
VPS4YPR173C SPT3P06844 337 aa5.78□□□□□ -1.48
VPS4YPR173C MAS2P11914 482 aa5.78□□□□□ -1.48
VPS4YPR173C GAL3P13045 520 aa5.78□□□□□ -1.48
VPS4YPR173C AMD1P15274 810 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C GUK1P15454 187 aaKnown RBP5.78□□□□□ -1.48
VPS4YPR173C PRI2P20457 528 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms