RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C IMP4P53941 290 aaKnown RBP3.57□□□□□ -1.84
CCL1YPR025C KAP120Q02932 1032 aa3.57□□□□□ -1.84
CCL1YPR025C YDR131CQ03899 556 aa3.57□□□□□ -1.84
CCL1YPR025C HNT3Q08702 217 aa3.57□□□□□ -1.84
CCL1YPR025C YPL199CQ08954 240 aa3.57□□□□□ -1.84
CCL1YPR025C HIP1P06775 603 aa3.56□□□□□ -1.84
CCL1YPR025C CHS1P08004 1131 aa3.56□□□□□ -1.84
CCL1YPR025C SAM1P10659 382 aaKnown RBP3.56□□□□□ -1.84
CCL1YPR025C SEC63P14906 663 aa3.56□□□□□ -1.84
CCL1YPR025C SAM2P19358 384 aaKnown RBP3.56□□□□□ -1.84
CCL1YPR025C CPR3P25719 182 aa3.56□□□□□ -1.84
CCL1YPR025C DBF4P32325 704 aa3.56□□□□□ -1.84
CCL1YPR025C ECM25P32525 599 aa3.56□□□□□ -1.84
CCL1YPR025C PCA1P38360 1216 aa3.56□□□□□ -1.84
CCL1YPR025C TIF5P38431 405 aaKnown RBP3.56□□□□□ -1.84
CCL1YPR025C MKT1P40850 830 aaKnown RBP3.56□□□□□ -1.84
CCL1YPR025C ECM27P47144 725 aa3.56□□□□□ -1.84
CCL1YPR025C MSO1P53604 210 aaKnown RBP3.56□□□□□ -1.84
CCL1YPR025C DON1Q05610 365 aa3.56□□□□□ -1.84
CCL1YPR025C YPR022CQ12139 1133 aa3.56□□□□□ -1.84
CCL1YPR025C VAM3Q12241 283 aa3.56□□□□□ -1.84
CCL1YPR025C HSP42Q12329 375 aa3.56□□□□□ -1.84
CCL1YPR025C YCL021W-AQ96VH3 125 aa3.56□□□□□ -1.84
CCL1YPR025C RNA14P25298 677 aaKnown RBP3.55□□□□□ -1.84
CCL1YPR025C SNT1P25357 1226 aa3.55□□□□□ -1.84
CCL1YPR025C RHB1P25378 209 aa3.55□□□□□ -1.84
CCL1YPR025C ERV1P27882 189 aa3.55□□□□□ -1.84
CCL1YPR025C BEM1P29366 551 aa3.55□□□□□ -1.84
CCL1YPR025C SIN4P32259 974 aa3.55□□□□□ -1.84
CCL1YPR025C HIR2P32480 875 aa3.55□□□□□ -1.84
CCL1YPR025C TFB1P32776 642 aa3.55□□□□□ -1.84
CCL1YPR025C YHR054CP38780 354 aa3.55□□□□□ -1.84
CCL1YPR025C YJR011CP47086 261 aaPredicted RBP3.55□□□□□ -1.84
CCL1YPR025C GOR1P53839 350 aa3.55□□□□□ -1.84
CCL1YPR025C SKO1Q02100 647 aa3.55□□□□□ -1.84
CCL1YPR025C ERB1Q04660 807 aaKnown RBP3.55□□□□□ -1.84
CCL1YPR025C MUM3Q08750 479 aa3.55□□□□□ -1.84
CCL1YPR025C PMR1P13586 950 aa3.54□□□□□ -1.84
CCL1YPR025C URA7P28274 579 aaKnown RBP3.54□□□□□ -1.84
CCL1YPR025C NAT2P37293 288 aa3.54□□□□□ -1.84
CCL1YPR025C RFC3P38629 340 aa3.54□□□□□ -1.84
CCL1YPR025C YFL067WP43537 175 aa3.54□□□□□ -1.84
CCL1YPR025C FRE4P53746 719 aa3.54□□□□□ -1.84
CCL1YPR025C MDM30Q05930 598 aa3.54□□□□□ -1.84
CCL1YPR025C THP3Q12049 470 aaKnown RBP3.54□□□□□ -1.84
CCL1YPR025C ISA2Q12425 185 aa3.54□□□□□ -1.84
CCL1YPR025C HIS4P00815 799 aaKnown RBP3.53□□□□□ -1.84
CCL1YPR025C KRE2P27809 442 aa3.53□□□□□ -1.84
CCL1YPR025C MMS4P38257 691 aa3.53□□□□□ -1.84
CCL1YPR025C LYS1P38998 373 aaRIP-Chip data3.53□□□□□ -1.84not detected
CCL1YPR025C ZIM17P42844 174 aa3.53□□□□□ -1.84
CCL1YPR025C BOR1P53838 576 aa3.53□□□□□ -1.84
CCL1YPR025C RMT2Q03305 412 aa3.53□□□□□ -1.84
CCL1YPR025C SCW10Q04951 389 aa3.53□□□□□ -1.84
CCL1YPR025C DIS3Q08162 1001 aaKnown RBP3.53□□□□□ -1.84
CCL1YPR025C HEM15P16622 393 aa3.52□□□□□ -1.85
CCL1YPR025C URA4P20051 364 aa3.52□□□□□ -1.85
CCL1YPR025C CLB1P24868 471 aa3.52□□□□□ -1.85
CCL1YPR025C TIP1P27654 210 aaPredicted RBP3.52□□□□□ -1.85
CCL1YPR025C RIB5P38145 238 aa3.52□□□□□ -1.85
CCL1YPR025C MST28P39552 234 aa3.52□□□□□ -1.85
CCL1YPR025C OST1P41543 476 aaKnown RBP3.52□□□□□ -1.85
CCL1YPR025C LAM5P43560 674 aa3.52□□□□□ -1.85
CCL1YPR025C HMS2P47175 358 aa3.52□□□□□ -1.85
CCL1YPR025C MRP51Q02950 344 aa3.52□□□□□ -1.85
CCL1YPR025C REX4Q08237 289 aa3.52□□□□□ -1.85
CCL1YPR025C TIM18Q08749 192 aa3.52□□□□□ -1.85
CCL1YPR025C RKM1Q08961 583 aaPredicted RBP3.52□□□□□ -1.85
CCL1YPR025C YLL056CQ12177 298 aa3.52□□□□□ -1.85
CCL1YPR025C PKH2Q12236 1081 aaKnown RBP3.52□□□□□ -1.85
CCL1YPR025C YER078W-AQ3E7A2 54 aa3.52□□□□□ -1.85
CCL1YPR025C CBS2P14905 389 aa3.51□□□□□ -1.85
CCL1YPR025C GEX1P25596 615 aa3.51□□□□□ -1.85
CCL1YPR025C BRF1P29056 596 aa3.51□□□□□ -1.85
CCL1YPR025C ITR1P30605 584 aa3.51□□□□□ -1.85
CCL1YPR025C SOR1P35497 357 aaKnown RBP3.51□□□□□ -1.85
CCL1YPR025C PIM1P36775 1133 aa3.51□□□□□ -1.85
CCL1YPR025C APE3P37302 537 aaKnown RBP3.51□□□□□ -1.85
CCL1YPR025C CAK1P43568 368 aaPredicted RBP3.51□□□□□ -1.85
CCL1YPR025C SSN8P47821 323 aa3.51□□□□□ -1.85
CCL1YPR025C ACL4Q03771 387 aa3.51□□□□□ -1.85
CCL1YPR025C YMR130WQ04223 302 aa3.51□□□□□ -1.85
CCL1YPR025C AIM32Q04689 311 aa3.51□□□□□ -1.85
CCL1YPR025C YLR345WQ06137 509 aa3.51□□□□□ -1.85
CCL1YPR025C SOR2Q07786 357 aa3.51□□□□□ -1.85
CCL1YPR025C VPS54Q12071 889 aa3.51□□□□□ -1.85
CCL1YPR025C ORT1Q12375 292 aa3.51□□□□□ -1.85
CCL1YPR025C SMC6Q12749 1114 aa3.51□□□□□ -1.85
CCL1YPR025C TEF1P02994 458 aaKnown RBP3.5□□□□□ -1.85
CCL1YPR025C YIL067CP40514 678 aa3.5□□□□□ -1.85
CCL1YPR025C IBD2P53892 351 aa3.5□□□□□ -1.85
CCL1YPR025C TY1B-AO13527 1196 aaKnown RBP3.49□□□□□ -1.85
CCL1YPR025C ARG4P04076 463 aaPredicted RBP3.49□□□□□ -1.85
CCL1YPR025C SLY1P22213 666 aa3.49□□□□□ -1.85
CCL1YPR025C CPR4P25334 318 aa3.49□□□□□ -1.85
CCL1YPR025C VMA8P32610 256 aaKnown RBP3.49□□□□□ -1.85
CCL1YPR025C MIX23P38162 196 aa3.49□□□□□ -1.85
CCL1YPR025C RRT2P38332 387 aa3.49□□□□□ -1.85
CCL1YPR025C WWM1P43582 211 aaKnown RBP3.49□□□□□ -1.85
CCL1YPR025C TCB2P48231 1178 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms