RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W SPP381P38282 291 aaPredicted RBP6.35□□□□□ -1.39
CIT3YPR001W ALP1P38971 573 aa6.35□□□□□ -1.39
CIT3YPR001W TAX4P47030 604 aa6.35□□□□□ -1.39
CIT3YPR001W NMA2P53204 395 aa6.35□□□□□ -1.39
CIT3YPR001W TRS23Q03784 219 aa6.35□□□□□ -1.39
CIT3YPR001W PLM2Q04383 521 aa6.35□□□□□ -1.39
CIT3YPR001W YLR224WQ05947 369 aa6.35□□□□□ -1.39
CIT3YPR001W NSE1Q07913 336 aa6.35□□□□□ -1.39
CIT3YPR001W NFT1P0CE68 1218 aa6.34□□□□□ -1.39
CIT3YPR001W STE4P18851 423 aa6.34□□□□□ -1.39
CIT3YPR001W HXT2P23585 541 aa6.34□□□□□ -1.39
CIT3YPR001W PAD1P33751 242 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
CIT3YPR001W SLX1P38324 304 aa6.34□□□□□ -1.39
CIT3YPR001W PAC11P40960 533 aa6.34□□□□□ -1.39
CIT3YPR001W TOS3P43637 560 aa6.34□□□□□ -1.39
CIT3YPR001W LOH1P47055 219 aa6.34□□□□□ -1.39
CIT3YPR001W KTR6P54070 446 aa6.34□□□□□ -1.39
CIT3YPR001W RSM23Q01163 450 aa6.34□□□□□ -1.39
CIT3YPR001W AAT1Q01802 451 aa6.34□□□□□ -1.39
CIT3YPR001W YMR178WQ03219 274 aaKnown RBP6.34□□□□□ -1.39
CIT3YPR001W GCN5Q03330 439 aa6.34□□□□□ -1.39
CIT3YPR001W RTN1Q04947 295 aaKnown RBP6.34□□□□□ -1.39
CIT3YPR001W PDR8Q06149 701 aa6.34□□□□□ -1.39
CIT3YPR001W MRPL35Q06678 367 aa6.34□□□□□ -1.39
CIT3YPR001W NRT1Q08485 598 aa6.34□□□□□ -1.39
CIT3YPR001W PEX27Q08580 376 aa6.34□□□□□ -1.39
CIT3YPR001W RDR1Q08904 546 aa6.34□□□□□ -1.39
CIT3YPR001W RUP1Q12242 671 aa6.34□□□□□ -1.39
CIT3YPR001W YDL177CQ12257 170 aa6.34□□□□□ -1.39
CIT3YPR001W YLR122CQ12312 125 aa6.34□□□□□ -1.39
CIT3YPR001W CFT1Q06632 1357 aaKnown RBP6.34□□□□□ -1.39
CIT3YPR001W ARG4P04076 463 aaPredicted RBP6.34□□□□□ -1.4
CIT3YPR001W CDC21P06785 304 aa6.34□□□□□ -1.4
CIT3YPR001W TRP4P07285 380 aaPredicted RBP6.34□□□□□ -1.4
CIT3YPR001W YUR1P26725 428 aa6.34□□□□□ -1.4
CIT3YPR001W YPS1P32329 569 aa6.34□□□□□ -1.4
CIT3YPR001W RME1P32338 300 aaKnown RBP6.34□□□□□ -1.4
CIT3YPR001W YSC83P32792 385 aa6.34□□□□□ -1.4
CIT3YPR001W RRN10P38204 145 aa6.34□□□□□ -1.4
CIT3YPR001W QDR3P38227 689 aa6.34□□□□□ -1.4
CIT3YPR001W FMP52P40008 231 aa6.34□□□□□ -1.4
CIT3YPR001W FMC1P40491 155 aa6.34□□□□□ -1.4
CIT3YPR001W SPG5P42933 373 aa6.34□□□□□ -1.4
CIT3YPR001W OTU1P43558 301 aa6.34□□□□□ -1.4
CIT3YPR001W BIO3P50277 480 aa6.34□□□□□ -1.4
CIT3YPR001W YNL260CP53846 198 aa6.34□□□□□ -1.4
CIT3YPR001W KTR5P53966 522 aaPredicted RBP6.34□□□□□ -1.4
CIT3YPR001W APM1Q00776 475 aaPredicted RBP6.34□□□□□ -1.4
CIT3YPR001W GTO3Q04806 366 aa6.34□□□□□ -1.4
CIT3YPR001W RPS10AQ08745 105 aaPredicted RBP6.34□□□□□ -1.4
CIT3YPR001W CDC36P06100 191 aaPredicted RBP6.33□□□□□ -1.4
CIT3YPR001W FUS3P16892 353 aaKnown RBP6.33□□□□□ -1.4
CIT3YPR001W RPI1P23250 407 aaKnown RBP6.33□□□□□ -1.4
CIT3YPR001W CNA1P23287 553 aa6.33□□□□□ -1.4
CIT3YPR001W RAD23P32628 398 aaKnown RBP6.33□□□□□ -1.4
CIT3YPR001W BUD2P33314 1104 aa6.33□□□□□ -1.4
CIT3YPR001W SHP1P34223 423 aa6.33□□□□□ -1.4
CIT3YPR001W ANS1P38832 159 aa6.33□□□□□ -1.4
CIT3YPR001W PCF11P39081 626 aaPredicted RBP6.33□□□□□ -1.4
CIT3YPR001W CDC40P40968 455 aaPredicted RBP6.33□□□□□ -1.4
CIT3YPR001W TFG2P41896 400 aaPredicted RBP6.33□□□□□ -1.4
CIT3YPR001W BNA6P43619 295 aa6.33□□□□□ -1.4
CIT3YPR001W YJL163CP46996 555 aa6.33□□□□□ -1.4
CIT3YPR001W HPF1Q05164 967 aa6.33□□□□□ -1.4
CIT3YPR001W ARO10Q06408 635 aa6.33□□□□□ -1.4
CIT3YPR001W YDL057WQ07379 328 aa6.33□□□□□ -1.4
CIT3YPR001W PMA1P05030 918 aaKnown RBP6.32□□□□□ -1.4
CIT3YPR001W PEP4P07267 405 aaKnown RBP6.32□□□□□ -1.4
CIT3YPR001W SEC63P14906 663 aa6.32□□□□□ -1.4
CIT3YPR001W ATP10P18496 279 aa6.32□□□□□ -1.4
CIT3YPR001W SRB4P32569 687 aa6.32□□□□□ -1.4
CIT3YPR001W FRE1P32791 686 aa6.32□□□□□ -1.4
CIT3YPR001W RPC34P32910 317 aa6.32□□□□□ -1.4
CIT3YPR001W ECT1P33412 323 aa6.32□□□□□ -1.4
CIT3YPR001W RPC25P35718 212 aa6.32□□□□□ -1.4
CIT3YPR001W GMH1P36125 273 aa6.32□□□□□ -1.4
CIT3YPR001W ECM4P36156 370 aa6.32□□□□□ -1.4
CIT3YPR001W YHR122WP38829 231 aa6.32□□□□□ -1.4
CIT3YPR001W GAT2P40209 560 aa6.32□□□□□ -1.4
CIT3YPR001W EFM5P53200 248 aaKnown RBP6.32□□□□□ -1.4
CIT3YPR001W TDA6Q06466 467 aa6.32□□□□□ -1.4
CIT3YPR001W DIB1Q06819 143 aaPredicted RBP6.32□□□□□ -1.4
CIT3YPR001W THP1Q08231 455 aa6.32□□□□□ -1.4
CIT3YPR001W GEP3Q08622 556 aa6.32□□□□□ -1.4
CIT3YPR001W LAS17Q12446 633 aa6.32□□□□□ -1.4
CIT3YPR001W RMD5Q12508 421 aa6.32□□□□□ -1.4
CIT3YPR001W ZPS1Q12512 249 aa6.32□□□□□ -1.4
CIT3YPR001W SPO24Q3E752 67 aa6.32□□□□□ -1.4
CIT3YPR001W BRR1Q99177 341 aaPredicted RBP6.32□□□□□ -1.4
CIT3YPR001W RNR3P21672 869 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W GBP2P25555 427 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
CIT3YPR001W PRO3P32263 286 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W MTR2P34232 184 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W SOR1P35497 357 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W PRP39P39682 629 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W YRB2P40517 327 aa6.31□□□□□ -1.4
CIT3YPR001W YIR014WP40570 242 aa6.31□□□□□ -1.4
CIT3YPR001W RPS10BP46784 105 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W BNA3P47039 444 aaKnown RBP6.31□□□□□ -1.4
CIT3YPR001W ATG4P53867 494 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms