RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C TFB1P32776 642 aa2.31□□□□□ -2.04
RPB11YOL005C GYP6P32806 458 aa2.31□□□□□ -2.04
RPB11YOL005C YME2P32843 850 aa2.31□□□□□ -2.04
RPB11YOL005C MPE1P35728 441 aaKnown RBP2.31□□□□□ -2.04
RPB11YOL005C STB6P36085 766 aa2.31□□□□□ -2.04
RPB11YOL005C YHR054CP38780 354 aa2.31□□□□□ -2.04
RPB11YOL005C YIL067CP40514 678 aa2.31□□□□□ -2.04
RPB11YOL005C VMA13P41807 478 aaKnown RBP2.31□□□□□ -2.04
RPB11YOL005C LAM5P43560 674 aa2.31□□□□□ -2.04
RPB11YOL005C WWM1P43582 211 aaKnown RBP2.31□□□□□ -2.04
RPB11YOL005C TRS85P46944 698 aa2.31□□□□□ -2.04
RPB11YOL005C MSO1P53604 210 aaKnown RBP2.31□□□□□ -2.04
RPB11YOL005C GIS2P53849 153 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
RPB11YOL005C ARK1P53974 638 aa2.31□□□□□ -2.04
RPB11YOL005C ODC1Q03028 310 aa2.31□□□□□ -2.04
RPB11YOL005C ROY1Q04847 553 aa2.31□□□□□ -2.04
RPB11YOL005C REX4Q08237 289 aa2.31□□□□□ -2.04
RPB11YOL005C HNT3Q08702 217 aa2.31□□□□□ -2.04
RPB11YOL005C THP3Q12049 470 aaKnown RBP2.31□□□□□ -2.04
RPB11YOL005C YLL056CQ12177 298 aa2.31□□□□□ -2.04
RPB11YOL005C RRD2Q12461 358 aa2.31□□□□□ -2.04
RPB11YOL005C HIR3P47171 1648 aa2.31□□□□□ -2.04
RPB11YOL005C HIS4P00815 799 aaKnown RBP2.3□□□□□ -2.04
RPB11YOL005C CHS1P08004 1131 aa2.3□□□□□ -2.04
RPB11YOL005C RIP1P08067 215 aa2.3□□□□□ -2.04
RPB11YOL005C CBS2P14905 389 aa2.3□□□□□ -2.04
RPB11YOL005C RHB1P25378 209 aa2.3□□□□□ -2.04
RPB11YOL005C DBF4P32325 704 aa2.3□□□□□ -2.04
RPB11YOL005C ECM25P32525 599 aa2.3□□□□□ -2.04
RPB11YOL005C NFU1P32860 256 aa2.3□□□□□ -2.04
RPB11YOL005C MMS4P38257 691 aa2.3□□□□□ -2.04
RPB11YOL005C NDT80P38830 627 aa2.3□□□□□ -2.04
RPB11YOL005C CCT2P39076 527 aaKnown RBP2.3□□□□□ -2.04
RPB11YOL005C OST1P41543 476 aaKnown RBP2.3□□□□□ -2.04
RPB11YOL005C NCA3P46955 337 aa2.3□□□□□ -2.04
RPB11YOL005C ECM27P47144 725 aa2.3□□□□□ -2.04
RPB11YOL005C HMS2P47175 358 aa2.3□□□□□ -2.04
RPB11YOL005C ART5P53244 586 aaKnown RBP2.3□□□□□ -2.04
RPB11YOL005C MRP51Q02950 344 aa2.3□□□□□ -2.04
RPB11YOL005C YPR022CQ12139 1133 aa2.3□□□□□ -2.04
RPB11YOL005C VAM3Q12241 283 aa2.3□□□□□ -2.04
RPB11YOL005C ISA2Q12425 185 aa2.3□□□□□ -2.04
RPB11YOL005C XRN1P22147 1528 aaKnown RBP2.3□□□□□ -2.04
RPB11YOL005C SKI3P17883 1432 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C BUD4P47136 1447 aa2.29□□□□□ -2.04
RPB11YOL005C URA4P20051 364 aa2.29□□□□□ -2.04
RPB11YOL005C RNA14P25298 677 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C DEG1P31115 442 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C RIB5P38145 238 aa2.29□□□□□ -2.04
RPB11YOL005C TIF5P38431 405 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C LSM5P40089 93 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C SAS2P40963 338 aa2.29□□□□□ -2.04
RPB11YOL005C RRT5P43607 289 aa2.29□□□□□ -2.04
RPB11YOL005C COS5P47187 383 aa2.29□□□□□ -2.04
RPB11YOL005C PHB2P50085 310 aa2.29□□□□□ -2.04
RPB11YOL005C YGR250CP53316 781 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C FRE4P53746 719 aa2.29□□□□□ -2.04
RPB11YOL005C BNI5P53890 448 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C KAP120Q02932 1032 aa2.29□□□□□ -2.04
RPB11YOL005C ERB1Q04660 807 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C DON1Q05610 365 aa2.29□□□□□ -2.04
RPB11YOL005C COS7Q07788 383 aa2.29□□□□□ -2.04
RPB11YOL005C DIS3Q08162 1001 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C TIM18Q08749 192 aa2.29□□□□□ -2.04
RPB11YOL005C RSA1Q08932 381 aa2.29□□□□□ -2.04
RPB11YOL005C VPS54Q12071 889 aa2.29□□□□□ -2.04
RPB11YOL005C PKH2Q12236 1081 aaKnown RBP2.29□□□□□ -2.04
RPB11YOL005C HSP42Q12329 375 aa2.29□□□□□ -2.04
RPB11YOL005C HEM15P16622 393 aa2.28□□□□□ -2.04
RPB11YOL005C SPO7P18410 259 aa2.28□□□□□ -2.04
RPB11YOL005C CPR4P25334 318 aa2.28□□□□□ -2.04
RPB11YOL005C HIR2P32480 875 aa2.28□□□□□ -2.04
RPB11YOL005C NPL6P32832 435 aa2.28□□□□□ -2.04
RPB11YOL005C YBL059WP34224 193 aa2.28□□□□□ -2.04
RPB11YOL005C AVT5P38176 459 aa2.28□□□□□ -2.04
RPB11YOL005C LYS1P38998 373 aaRIP-Chip data2.28□□□□□ -2.04not detected
RPB11YOL005C SSN8P47821 323 aa2.28□□□□□ -2.04
RPB11YOL005C BOR1P53838 576 aa2.28□□□□□ -2.04
RPB11YOL005C IBD2P53892 351 aa2.28□□□□□ -2.04
RPB11YOL005C RMT2Q03305 412 aa2.28□□□□□ -2.04
RPB11YOL005C YMR130WQ04223 302 aa2.28□□□□□ -2.04
RPB11YOL005C PBA1Q05778 276 aa2.28□□□□□ -2.04
RPB11YOL005C YOR387CQ08910 206 aa2.28□□□□□ -2.04
RPB11YOL005C YLR108CQ12259 485 aa2.28□□□□□ -2.04
RPB11YOL005C YER078W-AQ3E7A2 54 aa2.28□□□□□ -2.04
RPB11YOL005C TY1B-AO13527 1196 aaKnown RBP2.27□□□□□ -2.05
RPB11YOL005C TEF1P02994 458 aaKnown RBP2.27□□□□□ -2.05
RPB11YOL005C ARG4P04076 463 aaPredicted RBP2.27□□□□□ -2.05
RPB11YOL005C PMR1P13586 950 aa2.27□□□□□ -2.05
RPB11YOL005C PDX1P16451 410 aa2.27□□□□□ -2.05
RPB11YOL005C CLN1P20437 546 aa2.27□□□□□ -2.05
RPB11YOL005C SLY1P22213 666 aa2.27□□□□□ -2.05
RPB11YOL005C RPC53P25441 422 aa2.27□□□□□ -2.05
RPB11YOL005C ADK2P26364 225 aa2.27□□□□□ -2.05
RPB11YOL005C TIP1P27654 210 aaPredicted RBP2.27□□□□□ -2.05
RPB11YOL005C ERV1P27882 189 aa2.27□□□□□ -2.05
RPB11YOL005C BRF1P29056 596 aa2.27□□□□□ -2.05
RPB11YOL005C SIN4P32259 974 aa2.27□□□□□ -2.05
RPB11YOL005C SOR1P35497 357 aaKnown RBP2.27□□□□□ -2.05
RPB11YOL005C APE3P37302 537 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms