RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	TYR1	P20049	452 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	RHB1	P25378	209 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	FUN19	P28003	413 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	PFF1	P38244	976 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	ATF1	P40353	525 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	KTR5	P53966	522 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	TAP42	Q04372	366 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	THI7	Q05998	598 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	HSP42	Q12329	375 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	RPL1A	P0CX43	217 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	RPL1B	P0CX44	217 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	RPI1	P23250	407 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	PHO84	P25297	587 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	ULP2	P40537	1034 aa	Predicted RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	DSL1	P53847	754 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	PHO92	Q06390	306 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	PGC1	Q08959	321 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	HER1	Q12276	1246 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	VMR1	P38735	1592 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	RPL6B	P05739	176 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	MGR1	P25573	417 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	SWH1	P35845	1188 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	PHD1	P36093	366 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	HEL1	P36113	551 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	YIR014W	P40570	242 aa		3.09	□□□□□ -1.91
PEX6	YNL329C	RPL6A	Q02326	176 aa	Known RBP	3.09	□□□□□ -1.91
PEX6	YNL329C	LEU4	P06208	619 aa	Known RBP	3.08	□□□□□ -1.92
PEX6	YNL329C	GPH1	P06738	902 aa	Known RBP	3.08	□□□□□ -1.92
PEX6	YNL329C	YNK1	P36010	153 aa	Known RBP	3.08	□□□□□ -1.92
PEX6	YNL329C	DUG2	P38149	878 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	RRP3	P38712	501 aa	Known RBP	3.08	□□□□□ -1.92
PEX6	YNL329C	YTA12	P40341	825 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	MED2	Q12124	431 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	NCE102	Q12207	173 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
PEX6	YNL329C	MTR10	Q99189	972 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	IML1	P47170	1584 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	PUP2	P32379	260 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	RSM22	P36056	628 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	ERG7	P38604	731 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	ARP1	P38696	384 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	NUP100	Q02629	959 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	YDR387C	Q04162	555 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	GSH2	Q08220	491 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	PMR1	P13586	950 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	SEC62	P21825	274 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	APE2	P32454	952 aa	Known RBP	3.08	□□□□□ -1.92
PEX6	YNL329C	SYG1	P40528	902 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	GPI1	P53306	609 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	RIM13	Q03792	727 aa		3.08	□□□□□ -1.92
PEX6	YNL329C	PGK1	P00560	416 aa	Known RBP	3.07	□□□□□ -1.92
PEX6	YNL329C	ZTA1	P38230	334 aa	Known RBP	3.07	□□□□□ -1.92
PEX6	YNL329C	FYV8	P46949	817 aa	Known RBP	3.07	□□□□□ -1.92
PEX6	YNL329C	ADA2	Q02336	434 aa		3.07	□□□□□ -1.92
PEX6	YNL329C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
PEX6	YNL329C	YIP5	P53108	310 aa		3.07	□□□□□ -1.92
PEX6	YNL329C	PCP1	P53259	346 aa		3.07	□□□□□ -1.92
PEX6	YNL329C	YDR341C	Q05506	607 aa	Known RBP	3.07	□□□□□ -1.92
PEX6	YNL329C	UAF30	Q08747	228 aa		3.07	□□□□□ -1.92
PEX6	YNL329C	TRM3	Q07527	1436 aa		3.07	□□□□□ -1.92
PEX6	YNL329C	RNA1	P11745	407 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	PTP1	P25044	335 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	ATP11	P32453	318 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	PHO90	P39535	881 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	ISC1	P40015	477 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	AZF1	P41696	914 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	VMA13	P41807	478 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	YNL181W	P53878	407 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	NCS2	P53923	493 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	YOR365C	Q08844	703 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	RPS2	P25443	254 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	KRR1	P25586	316 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	PPZ1	P26570	692 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	DAD2	P36162	133 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	RRP4	P38792	359 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	MNL1	P38888	796 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	PCF11	P39081	626 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	RTS2	P40962	232 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	PSA1	P41940	361 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	ALT2	P52892	507 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	ROG1	P53118	685 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	RPT4	P53549	437 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	TDA7	P53882	636 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	ECI1	Q05871	280 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	REX4	Q08237	289 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	SGV1	P23293	657 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	SOR1	P35497	357 aa	Known RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	YER130C	P39959	443 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	TFG2	P41896	400 aa	Predicted RBP	3.06	□□□□□ -1.92
PEX6	YNL329C	PHB2	P50085	310 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	RHO4	Q00246	291 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	SEG1	Q04279	960 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	SOR2	Q07786	357 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	BSC1	Q12140	328 aa		3.06	□□□□□ -1.92
PEX6	YNL329C	USO1	P25386	1790 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	APC1	P53886	1748 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	MBR1	P23493	339 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	GID7	P25569	745 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	YPK3	P38070	525 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	RRN10	P38204	145 aa		3.05	□□□□□ -1.92
PEX6	YNL329C	IAH1	P41734	238 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 27 ms