RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YTA12P40341 825 aa3.3□□□□□ -1.88
WHI3YNL197C YIR014WP40570 242 aa3.3□□□□□ -1.88
WHI3YNL197C GCD10P41814 478 aa3.3□□□□□ -1.88
WHI3YNL197C YMR034CQ05131 434 aaPredicted RBP3.3□□□□□ -1.88
WHI3YNL197C SNT309Q06091 175 aaPredicted RBP3.3□□□□□ -1.88
WHI3YNL197C NDL1Q06568 189 aa3.3□□□□□ -1.88
WHI3YNL197C NRT1Q08485 598 aa3.3□□□□□ -1.88
WHI3YNL197C GEP3Q08622 556 aa3.3□□□□□ -1.88
WHI3YNL197C HNM1P19807 563 aa3.29□□□□□ -1.88
WHI3YNL197C YCR022CP25620 114 aa3.29□□□□□ -1.88
WHI3YNL197C TOA1P32773 286 aa3.29□□□□□ -1.88
WHI3YNL197C SIP2P34164 415 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C YIR016WP40572 265 aa3.29□□□□□ -1.88
WHI3YNL197C AZF1P41696 914 aa3.29□□□□□ -1.88
WHI3YNL197C EOS1P53938 366 aa3.29□□□□□ -1.88
WHI3YNL197C RPM2Q02773 1202 aa3.29□□□□□ -1.88
WHI3YNL197C DIG1Q03063 452 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C RPN9Q04062 393 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C DSE3Q08729 430 aa3.29□□□□□ -1.88
WHI3YNL197C YDL009CQ12210 107 aa3.29□□□□□ -1.88
WHI3YNL197C ILV5P06168 395 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C MRS3P10566 314 aa3.29□□□□□ -1.88
WHI3YNL197C SRV2P17555 526 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C GLN3P18494 730 aa3.29□□□□□ -1.88
WHI3YNL197C SEC62P21825 274 aa3.29□□□□□ -1.88
WHI3YNL197C CTR86P25355 563 aa3.29□□□□□ -1.88
WHI3YNL197C MSP1P28737 362 aa3.29□□□□□ -1.88
WHI3YNL197C ECM25P32525 599 aa3.29□□□□□ -1.88
WHI3YNL197C RPN2P32565 945 aaKnown RBP3.29□□□□□ -1.88
WHI3YNL197C DAD2P36162 133 aa3.29□□□□□ -1.88
WHI3YNL197C RRN10P38204 145 aa3.29□□□□□ -1.88
WHI3YNL197C PFF1P38244 976 aa3.29□□□□□ -1.88
WHI3YNL197C SEC5P89102 971 aa3.29□□□□□ -1.88
WHI3YNL197C MRPL51Q06090 140 aaPredicted RBP3.29□□□□□ -1.88
WHI3YNL197C PMR1P13586 950 aa3.28□□□□□ -1.88
WHI3YNL197C ALG1P16661 449 aa3.28□□□□□ -1.88
WHI3YNL197C SMY1P32364 656 aaKnown RBP3.28□□□□□ -1.88
WHI3YNL197C ATO2P32907 282 aa3.28□□□□□ -1.88
WHI3YNL197C ARC40P38328 384 aaKnown RBP3.28□□□□□ -1.88
WHI3YNL197C GPI16P38875 610 aa3.28□□□□□ -1.88
WHI3YNL197C YPS6P40583 537 aa3.28□□□□□ -1.88
WHI3YNL197C MDE1P47095 244 aa3.28□□□□□ -1.88
WHI3YNL197C SCW4P53334 386 aaKnown RBP3.28□□□□□ -1.88
WHI3YNL197C MEH1Q02205 184 aa3.28□□□□□ -1.88
WHI3YNL197C YEH2Q07950 538 aa3.28□□□□□ -1.88
WHI3YNL197C LSP1Q12230 341 aaKnown RBP3.28□□□□□ -1.88
WHI3YNL197C CSR2Q12734 1121 aa3.28□□□□□ -1.88
WHI3YNL197C YML002WP0CF17 737 aa3.27□□□□□ -1.89
WHI3YNL197C RIM1P32445 135 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C REC114P32841 428 aa3.27□□□□□ -1.89
WHI3YNL197C UIP5P36137 443 aa3.27□□□□□ -1.89
WHI3YNL197C CBP4P37267 147 aa3.27□□□□□ -1.89
WHI3YNL197C STP2P38704 541 aa3.27□□□□□ -1.89
WHI3YNL197C YND1P40009 630 aa3.27□□□□□ -1.89
WHI3YNL197C ISC1P40015 477 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C GAT2P40209 560 aa3.27□□□□□ -1.89
WHI3YNL197C FYV8P46949 817 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C PCP1P53259 346 aa3.27□□□□□ -1.89
WHI3YNL197C YIF1P53845 314 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C IRC15Q02733 499 aa3.27□□□□□ -1.89
WHI3YNL197C TAF12Q03761 539 aa3.27□□□□□ -1.89
WHI3YNL197C HCR1Q05775 265 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C PML1Q07930 204 aaPredicted RBP3.27□□□□□ -1.89
WHI3YNL197C PSY3Q12318 242 aa3.27□□□□□ -1.89
WHI3YNL197C RPI1P23250 407 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C PTP1P25044 335 aa3.27□□□□□ -1.89
WHI3YNL197C YCR043CP25361 127 aa3.27□□□□□ -1.89
WHI3YNL197C SEC1P30619 724 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C APE2P32454 952 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C FRE2P36033 711 aa3.27□□□□□ -1.89
WHI3YNL197C SPC97P38863 823 aa3.27□□□□□ -1.89
WHI3YNL197C YAL037WP39728 267 aa3.27□□□□□ -1.89
WHI3YNL197C HAT2P39984 401 aa3.27□□□□□ -1.89
WHI3YNL197C GWT1P47026 490 aa3.27□□□□□ -1.89
WHI3YNL197C DSL1P53847 754 aa3.27□□□□□ -1.89
WHI3YNL197C GPI15P53961 229 aa3.27□□□□□ -1.89
WHI3YNL197C GIP3Q03016 1276 aa3.27□□□□□ -1.89
WHI3YNL197C PPM1Q04081 328 aa3.27□□□□□ -1.89
WHI3YNL197C DBP9Q06218 594 aaKnown RBP3.27□□□□□ -1.89
WHI3YNL197C RMD5Q12508 421 aa3.27□□□□□ -1.89
WHI3YNL197C VMA2P16140 517 aaKnown RBP3.26□□□□□ -1.89
WHI3YNL197C CDC23P16522 626 aa3.26□□□□□ -1.89
WHI3YNL197C ITR1P30605 584 aa3.26□□□□□ -1.89
WHI3YNL197C MRPL4P36517 319 aa3.26□□□□□ -1.89
WHI3YNL197C CHS6P40955 746 aa3.26□□□□□ -1.89
WHI3YNL197C TES1P41903 349 aaKnown RBP3.26□□□□□ -1.89
WHI3YNL197C RRT5P43607 289 aa3.26□□□□□ -1.89
WHI3YNL197C YIP1P53039 248 aa3.26□□□□□ -1.89
WHI3YNL197C SFG1Q12507 346 aa3.26□□□□□ -1.89
WHI3YNL197C HIS4P00815 799 aaKnown RBP3.25□□□□□ -1.89
WHI3YNL197C IMA3P0CW40 589 aa3.25□□□□□ -1.89
WHI3YNL197C IMA4P0CW41 589 aa3.25□□□□□ -1.89
WHI3YNL197C ATS1P31386 333 aa3.25□□□□□ -1.89
WHI3YNL197C ROG1P53118 685 aa3.25□□□□□ -1.89
WHI3YNL197C YDR415CQ04033 374 aaPredicted RBP3.25□□□□□ -1.89
WHI3YNL197C URH1Q04179 340 aa3.25□□□□□ -1.89
WHI3YNL197C IMA2Q08295 589 aa3.25□□□□□ -1.89
WHI3YNL197C ORT1Q12375 292 aa3.25□□□□□ -1.89
WHI3YNL197C EXO70P19658 623 aa3.25□□□□□ -1.89
WHI3YNL197C PHO84P25297 587 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms