RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YEL028WP39989 153 aa2.39□□□□□ -2.03
SGS1YMR190C LRO1P40345 661 aa2.39□□□□□ -2.03
SGS1YMR190C OCA1P50946 238 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C PEX8P53248 589 aa2.39□□□□□ -2.03
SGS1YMR190C SIW14P53965 281 aa2.39□□□□□ -2.03
SGS1YMR190C LRS4Q04087 347 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C SWC7Q06707 132 aa2.39□□□□□ -2.03
SGS1YMR190C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SGS1YMR190C SGT1Q08446 395 aa2.39□□□□□ -2.03
SGS1YMR190C RDR1Q08904 546 aa2.39□□□□□ -2.03
SGS1YMR190C YDL211CQ12121 372 aa2.39□□□□□ -2.03
SGS1YMR190C BAG7Q12128 409 aa2.39□□□□□ -2.03
SGS1YMR190C RRP42Q12277 265 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C RGS2Q99188 309 aa2.39□□□□□ -2.03
SGS1YMR190C ARD1P07347 238 aaPredicted RBP2.39□□□□□ -2.03
SGS1YMR190C FUM1P08417 488 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C MPH2P0CD99 609 aa2.39□□□□□ -2.03
SGS1YMR190C SKN1P33336 771 aa2.39□□□□□ -2.03
SGS1YMR190C TSL1P38427 1098 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C ALG8P40351 577 aa2.39□□□□□ -2.03
SGS1YMR190C IAH1P41734 238 aa2.39□□□□□ -2.03
SGS1YMR190C ALK1P43633 760 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C AAD10P47182 288 aa2.39□□□□□ -2.03
SGS1YMR190C ERG13P54839 491 aaKnown RBP2.39□□□□□ -2.03
SGS1YMR190C UBP2Q01476 1272 aa2.39□□□□□ -2.03
SGS1YMR190C YDR132CQ03900 495 aa2.39□□□□□ -2.03
SGS1YMR190C YCS4Q06156 1176 aa2.39□□□□□ -2.03
SGS1YMR190C YDR056CQ12025 205 aa2.39□□□□□ -2.03
SGS1YMR190C YGR035W-AQ45U48 73 aa2.39□□□□□ -2.03
SGS1YMR190C RPS4AP0CX35 261 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C RPS4BP0CX36 261 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C CBS1P14066 229 aa2.38□□□□□ -2.03
SGS1YMR190C TYR1P20049 452 aa2.38□□□□□ -2.03
SGS1YMR190C PRP4P20053 465 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C ATP12P22135 325 aa2.38□□□□□ -2.03
SGS1YMR190C AAD3P25612 363 aa2.38□□□□□ -2.03
SGS1YMR190C PHO91P27514 894 aa2.38□□□□□ -2.03
SGS1YMR190C SBA1P28707 216 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C BZZ1P38822 633 aa2.38□□□□□ -2.03
SGS1YMR190C AXL2P38928 823 aa2.38□□□□□ -2.03
SGS1YMR190C TPA1P40032 644 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C FKH2P41813 862 aa2.38□□□□□ -2.03
SGS1YMR190C CNN1P43618 361 aa2.38□□□□□ -2.03
SGS1YMR190C MPS2P53159 387 aa2.38□□□□□ -2.03
SGS1YMR190C MRPL13Q02204 264 aa2.38□□□□□ -2.03
SGS1YMR190C PET191Q02772 108 aa2.38□□□□□ -2.03
SGS1YMR190C NHX1Q04121 633 aa2.38□□□□□ -2.03
SGS1YMR190C STP3Q05937 343 aa2.38□□□□□ -2.03
SGS1YMR190C HAL9Q12180 1030 aa2.38□□□□□ -2.03
SGS1YMR190C ATP6P00854 259 aa2.38□□□□□ -2.03
SGS1YMR190C PAB1P04147 577 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SGS1YMR190C ARO3P14843 370 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C GRX2P17695 143 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C HRR25P29295 494 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C AEP1P32493 518 aa2.38□□□□□ -2.03
SGS1YMR190C PHO89P38361 574 aa2.38□□□□□ -2.03
SGS1YMR190C ERP5P38819 212 aa2.38□□□□□ -2.03
SGS1YMR190C TIF11P38912 153 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C CIN1P40987 1014 aa2.38□□□□□ -2.03
SGS1YMR190C GCD14P46959 383 aaPredicted RBP2.38□□□□□ -2.03
SGS1YMR190C KEL2P50090 882 aa2.38□□□□□ -2.03
SGS1YMR190C USE1P53146 245 aa2.38□□□□□ -2.03
SGS1YMR190C ATF2P53296 535 aa2.38□□□□□ -2.03
SGS1YMR190C TAF11Q04226 346 aa2.38□□□□□ -2.03
SGS1YMR190C BOP2Q06150 570 aa2.38□□□□□ -2.03
SGS1YMR190C MFG1Q07684 458 aa2.38□□□□□ -2.03
SGS1YMR190C YTM1Q12024 460 aaPredicted RBP2.38□□□□□ -2.03
SGS1YMR190C PRP8P33334 2413 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C RHO2P06781 192 aa2.38□□□□□ -2.03
SGS1YMR190C YHR214C-DP0CX93 97 aa2.38□□□□□ -2.03
SGS1YMR190C CLN1P20437 546 aa2.38□□□□□ -2.03
SGS1YMR190C VAN1P23642 535 aa2.38□□□□□ -2.03
SGS1YMR190C COX13P32799 129 aa2.38□□□□□ -2.03
SGS1YMR190C FRE2P36033 711 aa2.38□□□□□ -2.03
SGS1YMR190C MUP3P38734 546 aa2.38□□□□□ -2.03
SGS1YMR190C RIM21P48565 533 aa2.38□□□□□ -2.03
SGS1YMR190C NAS6P50086 228 aa2.38□□□□□ -2.03
SGS1YMR190C RNH70P53331 553 aa2.38□□□□□ -2.03
SGS1YMR190C HST2P53686 357 aa2.38□□□□□ -2.03
SGS1YMR190C NUP100Q02629 959 aa2.38□□□□□ -2.03
SGS1YMR190C YMR209CQ03648 457 aa2.38□□□□□ -2.03
SGS1YMR190C SSY1Q03770 852 aa2.38□□□□□ -2.03
SGS1YMR190C GMC1Q04399 608 aa2.38□□□□□ -2.03
SGS1YMR190C GGA1Q06336 557 aa2.38□□□□□ -2.03
SGS1YMR190C SYT1Q06836 1226 aa2.38□□□□□ -2.03
SGS1YMR190C VHS3Q08438 674 aa2.38□□□□□ -2.03
SGS1YMR190C YOR114WQ12219 294 aa2.38□□□□□ -2.03
SGS1YMR190C REP1P03871 373 aa2.38□□□□□ -2.03
SGS1YMR190C SUA7P29055 345 aaPredicted RBP2.38□□□□□ -2.03
SGS1YMR190C MET22P32179 357 aa2.38□□□□□ -2.03
SGS1YMR190C SSO1P32867 290 aa2.38□□□□□ -2.03
SGS1YMR190C SEC31P38968 1273 aaKnown RBP2.38□□□□□ -2.03
SGS1YMR190C ALG5P40350 334 aa2.38□□□□□ -2.03
SGS1YMR190C COA1P40452 197 aa2.38□□□□□ -2.03
SGS1YMR190C AVT7P40501 490 aa2.38□□□□□ -2.03
SGS1YMR190C STB2P46679 850 aa2.38□□□□□ -2.03
SGS1YMR190C YGR127WP53275 312 aa2.38□□□□□ -2.03
SGS1YMR190C DMA2P53924 522 aa2.38□□□□□ -2.03
SGS1YMR190C TRS31Q03337 283 aa2.38□□□□□ -2.03
SGS1YMR190C YPR109WQ06104 294 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms