RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W CTF3Q12748 733 aa1.76□□□□□ -2.13
RTP1YMR185W TAD3Q9URQ3 322 aa1.76□□□□□ -2.13
RTP1YMR185W CBP1P07252 654 aa1.76□□□□□ -2.13
RTP1YMR185W FBP1P09201 348 aa1.76□□□□□ -2.13
RTP1YMR185W CAP2P13517 287 aa1.76□□□□□ -2.13
RTP1YMR185W MET8P15807 274 aa1.76□□□□□ -2.13
RTP1YMR185W SEN2P16658 377 aa1.76□□□□□ -2.13
RTP1YMR185W RPB4P20433 221 aaPredicted RBP1.76□□□□□ -2.13
RTP1YMR185W PEX3P28795 441 aa1.76□□□□□ -2.13
RTP1YMR185W PEP7P32609 515 aa1.76□□□□□ -2.13
RTP1YMR185W COX13P32799 129 aa1.76□□□□□ -2.13
RTP1YMR185W PTH2P34222 208 aa1.76□□□□□ -2.13
RTP1YMR185W SHP1P34223 423 aa1.76□□□□□ -2.13
RTP1YMR185W SPC34P36131 295 aa1.76□□□□□ -2.13
RTP1YMR185W PIM1P36775 1133 aa1.76□□□□□ -2.13
RTP1YMR185W GPX2P38143 162 aa1.76□□□□□ -2.13
RTP1YMR185W YBL029WP38201 376 aa1.76□□□□□ -2.13
RTP1YMR185W YBR053CP38235 358 aa1.76□□□□□ -2.13
RTP1YMR185W SRP68P38687 599 aaKnown RBP1.76□□□□□ -2.13
RTP1YMR185W YHR045WP38775 560 aa1.76□□□□□ -2.13
RTP1YMR185W PEA2P40091 420 aa1.76□□□□□ -2.13
RTP1YMR185W PRE6P40303 254 aaKnown RBP1.76□□□□□ -2.13
RTP1YMR185W RPT2P40327 437 aaKnown RBP1.76□□□□□ -2.13
RTP1YMR185W GAB1P41733 394 aa1.76□□□□□ -2.13
RTP1YMR185W PFD1P46988 109 aa1.76□□□□□ -2.13
RTP1YMR185W AIM23P47015 356 aa1.76□□□□□ -2.13
RTP1YMR185W RAI1P53063 387 aaKnown RBP1.76□□□□□ -2.13
RTP1YMR185W BOL2P53082 120 aa1.76□□□□□ -2.13
RTP1YMR185W TPN1P53099 579 aa1.76□□□□□ -2.13
RTP1YMR185W MET13P53128 600 aa1.76□□□□□ -2.13
RTP1YMR185W YGR053CP53234 283 aa1.76□□□□□ -2.13
RTP1YMR185W SHY1P53266 389 aa1.76□□□□□ -2.13
RTP1YMR185W YGR168CP53293 376 aa1.76□□□□□ -2.13
RTP1YMR185W SIW14P53965 281 aa1.76□□□□□ -2.13
RTP1YMR185W TIM11P81449 96 aaPredicted RBP1.76□□□□□ -2.13
RTP1YMR185W MRPS16Q02608 121 aa1.76□□□□□ -2.13
RTP1YMR185W EFR3Q03653 782 aaKnown RBP1.76□□□□□ -2.13
RTP1YMR185W MUS81Q04149 632 aaPredicted RBP1.76□□□□□ -2.13
RTP1YMR185W SPO20Q04359 397 aa1.76□□□□□ -2.13
RTP1YMR185W YMR111CQ04461 462 aaPredicted RBP1.76□□□□□ -2.13
RTP1YMR185W YMR321CQ04898 105 aa1.76□□□□□ -2.13
RTP1YMR185W YLR224WQ05947 369 aa1.76□□□□□ -2.13
RTP1YMR185W ASR1Q06834 288 aa1.76□□□□□ -2.13
RTP1YMR185W AAD4Q07747 329 aa1.76□□□□□ -2.13
RTP1YMR185W SGT1Q08446 395 aa1.76□□□□□ -2.13
RTP1YMR185W YLL058WQ12198 575 aa1.76□□□□□ -2.13
RTP1YMR185W RTR2Q12378 196 aa1.76□□□□□ -2.13
RTP1YMR185W MHF2Q3E829 80 aa1.76□□□□□ -2.13
RTP1YMR185W RPS9AO13516 197 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W ADE4P04046 510 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W ATP1P07251 545 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W SEC53P07283 254 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W MAS1P10507 462 aa1.75□□□□□ -2.13
RTP1YMR185W MDH1P17505 334 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
RTP1YMR185W SNF5P18480 905 aa1.75□□□□□ -2.13
RTP1YMR185W DAP2P18962 818 aa1.75□□□□□ -2.13
RTP1YMR185W ACO1P19414 778 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
RTP1YMR185W RAD27P26793 382 aa1.75□□□□□ -2.13
RTP1YMR185W PRR1P28708 518 aa1.75□□□□□ -2.13
RTP1YMR185W ARP2P32381 391 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W MRPL17P36528 281 aa1.75□□□□□ -2.13
RTP1YMR185W YBR225WP38321 900 aa1.75□□□□□ -2.13
RTP1YMR185W RCK1P38622 512 aa1.75□□□□□ -2.13
RTP1YMR185W SRP72P38688 640 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W YHK8P38776 514 aa1.75□□□□□ -2.13
RTP1YMR185W MNN9P39107 395 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W YEL028WP39989 153 aa1.75□□□□□ -2.13
RTP1YMR185W PCL6P40038 420 aa1.75□□□□□ -2.13
RTP1YMR185W BUR6P40096 142 aa1.75□□□□□ -2.13
RTP1YMR185W ESL1P40456 1118 aa1.75□□□□□ -2.13
RTP1YMR185W FKH2P41813 862 aa1.75□□□□□ -2.13
RTP1YMR185W DLD2P46681 530 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W SNG1P46950 547 aa1.75□□□□□ -2.13
RTP1YMR185W SSY5P47002 699 aa1.75□□□□□ -2.13
RTP1YMR185W EFM3P47163 339 aa1.75□□□□□ -2.13
RTP1YMR185W PHO23P50947 330 aa1.75□□□□□ -2.13
RTP1YMR185W NBP35P52920 328 aa1.75□□□□□ -2.13
RTP1YMR185W YGR127WP53275 312 aa1.75□□□□□ -2.13
RTP1YMR185W CDC14Q00684 551 aa1.75□□□□□ -2.13
RTP1YMR185W NUP116Q02630 1113 aa1.75□□□□□ -2.13
RTP1YMR185W PET117Q02771 107 aa1.75□□□□□ -2.13
RTP1YMR185W SLU7Q02775 382 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W TRS31Q03337 283 aa1.75□□□□□ -2.13
RTP1YMR185W SKY1Q03656 742 aa1.75□□□□□ -2.13
RTP1YMR185W FIN1Q03898 291 aa1.75□□□□□ -2.13
RTP1YMR185W CSN9Q03981 162 aa1.75□□□□□ -2.13
RTP1YMR185W TIF35Q04067 274 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W BCH1Q05029 724 aa1.75□□□□□ -2.13
RTP1YMR185W COA4Q05809 96 aa1.75□□□□□ -2.13
RTP1YMR185W YLR446WQ06204 433 aa1.75□□□□□ -2.13
RTP1YMR185W DBP9Q06218 594 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W REH1Q06709 432 aa1.75□□□□□ -2.13
RTP1YMR185W DTD1Q07648 150 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W THP1Q08231 455 aa1.75□□□□□ -2.13
RTP1YMR185W SAM4Q08985 325 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W MCD1Q12158 566 aa1.75□□□□□ -2.13
RTP1YMR185W YGK3Q12222 375 aaPredicted RBP1.75□□□□□ -2.13
RTP1YMR185W MDM12Q92328 271 aa1.75□□□□□ -2.13
RTP1YMR185W HXK2P04807 486 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W RPL4AP10664 362 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms