RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C RPN9Q04062 393 aaKnown RBP3.39□□□□□ -1.87
SHH3YMR118C YDR109CQ04585 715 aa3.39□□□□□ -1.87
SHH3YMR118C YMR321CQ04898 105 aa3.39□□□□□ -1.87
SHH3YMR118C BLS1Q06071 122 aa3.39□□□□□ -1.87
SHH3YMR118C RIF2Q06208 395 aa3.39□□□□□ -1.87
SHH3YMR118C VTA1Q06263 330 aa3.39□□□□□ -1.87
SHH3YMR118C GSH2Q08220 491 aa3.39□□□□□ -1.87
SHH3YMR118C APC5Q08683 685 aa3.39□□□□□ -1.87
SHH3YMR118C ATP16Q12165 160 aa3.39□□□□□ -1.87
SHH3YMR118C ACF2Q12168 779 aa3.39□□□□□ -1.87
SHH3YMR118C PST2Q12335 198 aaKnown RBP3.39□□□□□ -1.87
SHH3YMR118C RPN6Q12377 434 aa3.39□□□□□ -1.87
SHH3YMR118C ATG31Q12421 196 aa3.39□□□□□ -1.87
SHH3YMR118C CSR2Q12734 1121 aa3.39□□□□□ -1.87
SHH3YMR118C YPL119C-AQ3E751 87 aa3.39□□□□□ -1.87
SHH3YMR118C YBR298C-AQ8TGK4 73 aa3.39□□□□□ -1.87
SHH3YMR118C MDM12Q92328 271 aa3.39□□□□□ -1.87
SHH3YMR118C HIS1P00498 297 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C PDE2P06776 526 aa3.38□□□□□ -1.87
SHH3YMR118C SEC53P07283 254 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C KIN2P13186 1147 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C PHO84P25297 587 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C RHB1P25378 209 aa3.38□□□□□ -1.87
SHH3YMR118C GAC1P28006 793 aa3.38□□□□□ -1.87
SHH3YMR118C ARO7P32178 256 aa3.38□□□□□ -1.87
SHH3YMR118C PEP7P32609 515 aa3.38□□□□□ -1.87
SHH3YMR118C IMP3P32899 183 aaPredicted RBP3.38□□□□□ -1.87
SHH3YMR118C NAT2P37293 288 aa3.38□□□□□ -1.87
SHH3YMR118C MAK5P38112 773 aaPredicted RBP3.38□□□□□ -1.87
SHH3YMR118C SRP72P38688 640 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C YHR020WP38708 688 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C PTC7P38797 343 aa3.38□□□□□ -1.87
SHH3YMR118C RSP5P39940 809 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C RPH1P39956 796 aa3.38□□□□□ -1.87
SHH3YMR118C YER034WP40022 185 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C YER137CP40083 148 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C ESL1P40456 1118 aa3.38□□□□□ -1.87
SHH3YMR118C AYR1P40471 297 aa3.38□□□□□ -1.87
SHH3YMR118C YKE4P40544 346 aa3.38□□□□□ -1.87
SHH3YMR118C YGR210CP42942 411 aa3.38□□□□□ -1.87
SHH3YMR118C ALR2P43553 858 aa3.38□□□□□ -1.87
SHH3YMR118C ALB1P47019 175 aaPredicted RBP3.38□□□□□ -1.87
SHH3YMR118C GTO1P48239 356 aa3.38□□□□□ -1.87
SHH3YMR118C TOM22P49334 152 aa3.38□□□□□ -1.87
SHH3YMR118C DAM1P53267 343 aa3.38□□□□□ -1.87
SHH3YMR118C YGR117CP53270 476 aa3.38□□□□□ -1.87
SHH3YMR118C GND2P53319 492 aa3.38□□□□□ -1.87
SHH3YMR118C ELA1P53861 379 aaPredicted RBP3.38□□□□□ -1.87
SHH3YMR118C DID2P69771 204 aa3.38□□□□□ -1.87
SHH3YMR118C PEX13P80667 386 aa3.38□□□□□ -1.87
SHH3YMR118C SPP2Q02521 185 aa3.38□□□□□ -1.87
SHH3YMR118C GRX5Q02784 150 aa3.38□□□□□ -1.87
SHH3YMR118C GOT1Q03554 138 aa3.38□□□□□ -1.87
SHH3YMR118C SPO20Q04359 397 aa3.38□□□□□ -1.87
SHH3YMR118C YHC1Q05900 231 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C GRX8Q05926 109 aa3.38□□□□□ -1.87
SHH3YMR118C DBP9Q06218 594 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C SWA2Q06677 668 aa3.38□□□□□ -1.87
SHH3YMR118C GRS2Q06817 618 aa3.38□□□□□ -1.87
SHH3YMR118C RCL1Q08096 367 aaPredicted RBP3.38□□□□□ -1.87
SHH3YMR118C NBA1Q08229 501 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C AVO1Q08236 1176 aa3.38□□□□□ -1.87
SHH3YMR118C TRE2Q08693 809 aa3.38□□□□□ -1.87
SHH3YMR118C GPB1Q08886 897 aa3.38□□□□□ -1.87
SHH3YMR118C RTT10Q08924 1013 aa3.38□□□□□ -1.87
SHH3YMR118C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SHH3YMR118C DDC1Q08949 612 aa3.38□□□□□ -1.87
SHH3YMR118C NUS1Q12063 375 aa3.38□□□□□ -1.87
SHH3YMR118C YOR022CQ12204 715 aa3.38□□□□□ -1.87
SHH3YMR118C JLP1Q12358 412 aa3.38□□□□□ -1.87
SHH3YMR118C WTM1Q12363 437 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C GTT2Q12390 233 aa3.38□□□□□ -1.87
SHH3YMR118C LPX1Q12405 387 aaKnown RBP3.38□□□□□ -1.87
SHH3YMR118C YPR1Q12458 312 aa3.38□□□□□ -1.87
SHH3YMR118C FMP16Q12497 93 aa3.38□□□□□ -1.87
SHH3YMR118C CTF3Q12748 733 aa3.38□□□□□ -1.87
SHH3YMR118C YKL018C-AQ3E7A7 99 aa3.38□□□□□ -1.87
SHH3YMR118C LAG2Q92325 660 aa3.38□□□□□ -1.87
SHH3YMR118C COX5AP00424 153 aa3.37□□□□□ -1.87
SHH3YMR118C RAS2P01120 322 aaKnown RBP3.37□□□□□ -1.87
SHH3YMR118C ADE4P04046 510 aaKnown RBP3.37□□□□□ -1.87
SHH3YMR118C GLN3P18494 730 aa3.37□□□□□ -1.87
SHH3YMR118C GRR1P24814 1151 aa3.37□□□□□ -1.87
SHH3YMR118C ATG22P25568 528 aa3.37□□□□□ -1.87
SHH3YMR118C YIH1P25637 258 aa3.37□□□□□ -1.87
SHH3YMR118C RAD27P26793 382 aa3.37□□□□□ -1.87
SHH3YMR118C RPS1AP33442 255 aaKnown RBP3.37□□□□□ -1.87
SHH3YMR118C NNK1P36003 928 aa3.37□□□□□ -1.87
SHH3YMR118C ARA1P38115 344 aa3.37□□□□□ -1.87
SHH3YMR118C FLR1P38124 548 aa3.37□□□□□ -1.87
SHH3YMR118C AIM3P38266 947 aaKnown RBP3.37□□□□□ -1.87
SHH3YMR118C SHE3P38272 425 aaKnown RBP3.37□□□□□ -1.87
SHH3YMR118C EFM1P38732 585 aa3.37□□□□□ -1.87
SHH3YMR118C ERV46P39727 415 aa3.37□□□□□ -1.87
SHH3YMR118C PHM8P40025 321 aa3.37□□□□□ -1.87
SHH3YMR118C COG3P40094 801 aa3.37□□□□□ -1.87
SHH3YMR118C YER186CP40101 306 aa3.37□□□□□ -1.87
SHH3YMR118C SOK1P40317 901 aa3.37□□□□□ -1.87
SHH3YMR118C GTS1P40956 396 aa3.37□□□□□ -1.87
SHH3YMR118C ARF3P40994 183 aaRIP-Chip data3.37□□□□□ -1.87not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms