RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W CRR1Q05790 422 aa5.14□□□□□ -1.59
SPG4YMR107W NEJ1Q06148 342 aa5.14□□□□□ -1.59
SPG4YMR107W SYT1Q06836 1226 aa5.14□□□□□ -1.59
SPG4YMR107W RRT8Q08219 342 aa5.14□□□□□ -1.59
SPG4YMR107W MSC6Q08818 692 aaKnown RBP5.14□□□□□ -1.59
SPG4YMR107W FEX1Q08913 375 aa5.14□□□□□ -1.59
SPG4YMR107W SLF1Q12034 447 aaKnown RBP5.14□□□□□ -1.59
SPG4YMR107W WTM2Q12206 467 aa5.14□□□□□ -1.59
SPG4YMR107W SVS1Q12254 260 aa5.14□□□□□ -1.59
SPG4YMR107W SAS5Q99314 248 aa5.14□□□□□ -1.59
SPG4YMR107W TIM9O74700 87 aa5.13□□□□□ -1.59
SPG4YMR107W TDH1P00360 332 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W GAL1P04385 528 aa5.13□□□□□ -1.59
SPG4YMR107W ARG81P05085 880 aa5.13□□□□□ -1.59
SPG4YMR107W SPS1P08458 490 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-LR4P0C2I8 440 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W YGL041W-AP0C5N3 154 aa5.13□□□□□ -1.59
SPG4YMR107W COS2P0CX12 379 aa5.13□□□□□ -1.59
SPG4YMR107W COS3P0CX13 379 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-DR6P0CX70 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-ER1P0CX71 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-LR2P0CX72 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-PLP0CX73 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-JR1P0CX74 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-LR3P0CX75 440 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-ML2P0CX76 440 aa5.13□□□□□ -1.59
SPG4YMR107W PRI2P20457 528 aa5.13□□□□□ -1.59
SPG4YMR107W YCR090CP25654 182 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W DHR2P36009 735 aaPredicted RBP5.13□□□□□ -1.59
SPG4YMR107W PHO88P38264 188 aaPredicted RBP5.13□□□□□ -1.59
SPG4YMR107W BIG1P38813 335 aa5.13□□□□□ -1.59
SPG4YMR107W MLH1P38920 769 aa5.13□□□□□ -1.59
SPG4YMR107W MSS4P38994 779 aa5.13□□□□□ -1.59
SPG4YMR107W DUN1P39009 513 aa5.13□□□□□ -1.59
SPG4YMR107W YAR028WP39548 234 aa5.13□□□□□ -1.59
SPG4YMR107W FMP52P40008 231 aa5.13□□□□□ -1.59
SPG4YMR107W ALD5P40047 520 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W ESL1P40456 1118 aa5.13□□□□□ -1.59
SPG4YMR107W YIL024CP40543 189 aa5.13□□□□□ -1.59
SPG4YMR107W GTT1P40582 234 aa5.13□□□□□ -1.59
SPG4YMR107W YGR053CP53234 283 aa5.13□□□□□ -1.59
SPG4YMR107W YPL062WQ02781 134 aa5.13□□□□□ -1.59
SPG4YMR107W PNG1Q02890 363 aa5.13□□□□□ -1.59
SPG4YMR107W YML037CQ03703 340 aa5.13□□□□□ -1.59
SPG4YMR107W YML020WQ03722 664 aa5.13□□□□□ -1.59
SPG4YMR107W SSY1Q03770 852 aa5.13□□□□□ -1.59
SPG4YMR107W SPO20Q04359 397 aa5.13□□□□□ -1.59
SPG4YMR107W YDR124WQ04608 324 aa5.13□□□□□ -1.59
SPG4YMR107W NNT1Q05874 261 aa5.13□□□□□ -1.59
SPG4YMR107W YLR224WQ05947 369 aa5.13□□□□□ -1.59
SPG4YMR107W CRD1Q07560 283 aa5.13□□□□□ -1.59
SPG4YMR107W GUD1Q07729 489 aa5.13□□□□□ -1.59
SPG4YMR107W YEH1Q07804 573 aa5.13□□□□□ -1.59
SPG4YMR107W SKI7Q08491 747 aaPredicted RBP5.13□□□□□ -1.59
SPG4YMR107W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SPG4YMR107W YDL176WQ12027 708 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-GR1Q12085 440 aa5.13□□□□□ -1.59
SPG4YMR107W AEP3Q12089 606 aa5.13□□□□□ -1.59
SPG4YMR107W RTC5Q12108 567 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W YLR126CQ12288 251 aa5.13□□□□□ -1.59
SPG4YMR107W YGL194C-AQ2V2P6 80 aa5.13□□□□□ -1.59
SPG4YMR107W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W TY1A-OLQ92392 440 aaKnown RBP5.13□□□□□ -1.59
SPG4YMR107W ADE4P04046 510 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W ARO3P14843 370 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W RPB4P20433 221 aaPredicted RBP5.12□□□□□ -1.59
SPG4YMR107W TRX2P22803 104 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W SYN8P31377 255 aa5.12□□□□□ -1.59
SPG4YMR107W EMP24P32803 203 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W SRY1P36007 326 aa5.12□□□□□ -1.59
SPG4YMR107W YKL077WP36081 392 aa5.12□□□□□ -1.59
SPG4YMR107W GPT2P36148 743 aa5.12□□□□□ -1.59
SPG4YMR107W KTR4P38131 464 aa5.12□□□□□ -1.59
SPG4YMR107W KEL1P38853 1164 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W PTI1P39927 425 aaPredicted RBP5.12□□□□□ -1.59
SPG4YMR107W FIR1P40020 876 aa5.12□□□□□ -1.59
SPG4YMR107W SPO73P40031 143 aa5.12□□□□□ -1.59
SPG4YMR107W ATM1P40416 690 aa5.12□□□□□ -1.59
SPG4YMR107W POP1P41812 875 aa5.12□□□□□ -1.59
SPG4YMR107W GSM1P42950 618 aa5.12□□□□□ -1.59
SPG4YMR107W YFL052WP43551 465 aa5.12□□□□□ -1.59
SPG4YMR107W RPN11P43588 306 aaKnown RBP5.12□□□□□ -1.59
SPG4YMR107W ALT2P52892 507 aa5.12□□□□□ -1.59
SPG4YMR107W IMO32P53219 342 aa5.12□□□□□ -1.59
SPG4YMR107W SPC98P53540 846 aa5.12□□□□□ -1.59
SPG4YMR107W CAF120P53836 1060 aa5.12□□□□□ -1.59
SPG4YMR107W ARP4P80428 489 aa5.12□□□□□ -1.59
SPG4YMR107W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SPG4YMR107W YMR279CQ03263 540 aa5.12□□□□□ -1.59
SPG4YMR107W CEF1Q03654 590 aaPredicted RBP5.12□□□□□ -1.59
SPG4YMR107W PLB2Q03674 706 aa5.12□□□□□ -1.59
SPG4YMR107W MSS11Q03825 758 aa5.12□□□□□ -1.59
SPG4YMR107W NHX1Q04121 633 aa5.12□□□□□ -1.59
SPG4YMR107W PDR8Q06149 701 aa5.12□□□□□ -1.59
SPG4YMR107W ARV1Q06541 321 aa5.12□□□□□ -1.59
SPG4YMR107W RSC3Q06639 885 aa5.12□□□□□ -1.59
SPG4YMR107W RAD34Q06665 692 aa5.12□□□□□ -1.59
SPG4YMR107W CDA2Q06703 312 aa5.12□□□□□ -1.59
SPG4YMR107W MFG1Q07684 458 aa5.12□□□□□ -1.59
SPG4YMR107W PLB3Q08108 686 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms