RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C PMR1P13586 950 aa6.12□□□□□ -1.43
ATG17YLR423C RIM1P32445 135 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C ANP1P32629 500 aa6.12□□□□□ -1.43
ATG17YLR423C SOR1P35497 357 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C ARC40P38328 384 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C RPL6AQ02326 176 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C YPL107WQ02873 248 aa6.12□□□□□ -1.43
ATG17YLR423C RLI1Q03195 608 aaKnown RBP6.12□□□□□ -1.43
ATG17YLR423C FMP42Q04991 504 aa6.12□□□□□ -1.43
ATG17YLR423C MDM30Q05930 598 aa6.12□□□□□ -1.43
ATG17YLR423C YLR456WQ06199 204 aa6.12□□□□□ -1.43
ATG17YLR423C SOR2Q07786 357 aa6.12□□□□□ -1.43
ATG17YLR423C REX4Q08237 289 aa6.12□□□□□ -1.43
ATG17YLR423C NFI1Q12216 726 aa6.12□□□□□ -1.43
ATG17YLR423C HIS4P00815 799 aaKnown RBP6.11□□□□□ -1.43
ATG17YLR423C YFL068WP0CX99 160 aa6.11□□□□□ -1.43
ATG17YLR423C YLL066W-AP0CY00 160 aa6.11□□□□□ -1.43
ATG17YLR423C YLL067W-AP0CY01 160 aa6.11□□□□□ -1.43
ATG17YLR423C SEC63P14906 663 aa6.11□□□□□ -1.43
ATG17YLR423C RRP1P35178 278 aaPredicted RBP6.11□□□□□ -1.43
ATG17YLR423C FRE2P36033 711 aa6.11□□□□□ -1.43
ATG17YLR423C YIL169CP40442 995 aa6.11□□□□□ -1.43
ATG17YLR423C YIL152WP40455 235 aa6.11□□□□□ -1.43
ATG17YLR423C PIB2P53191 635 aa6.11□□□□□ -1.43
ATG17YLR423C PPM1Q04081 328 aa6.11□□□□□ -1.43
ATG17YLR423C BNA5Q05979 453 aa6.11□□□□□ -1.43
ATG17YLR423C YAR066WP0CX18 203 aa6.1□□□□□ -1.43
ATG17YLR423C YHR214WP0CX19 203 aa6.1□□□□□ -1.43
ATG17YLR423C MSP1P28737 362 aa6.1□□□□□ -1.43
ATG17YLR423C ASC1P38011 319 aaKnown RBP6.1□□□□□ -1.43
ATG17YLR423C RFC3P38629 340 aa6.1□□□□□ -1.43
ATG17YLR423C MET30P39014 640 aa6.1□□□□□ -1.43
ATG17YLR423C TOM22P49334 152 aa6.1□□□□□ -1.43
ATG17YLR423C YDR286CQ05530 114 aa6.1□□□□□ -1.43
ATG17YLR423C AMD1P15274 810 aaKnown RBP6.09□□□□□ -1.43
ATG17YLR423C ECM25P32525 599 aa6.09□□□□□ -1.43
ATG17YLR423C SIP2P34164 415 aaKnown RBP6.09□□□□□ -1.43
ATG17YLR423C OLA1P38219 394 aaKnown RBP6.09□□□□□ -1.43
ATG17YLR423C SAD1P43589 448 aa6.09□□□□□ -1.43
ATG17YLR423C TRS85P46944 698 aa6.09□□□□□ -1.43
ATG17YLR423C IKS1P47042 667 aa6.09□□□□□ -1.43
ATG17YLR423C PNG1Q02890 363 aa6.09□□□□□ -1.43
ATG17YLR423C BUG1Q12191 341 aa6.09□□□□□ -1.43
ATG17YLR423C YDR061WQ12298 539 aa6.09□□□□□ -1.43
ATG17YLR423C ARO3P14843 370 aaKnown RBP6.08□□□□□ -1.44
ATG17YLR423C GEX1P25596 615 aa6.08□□□□□ -1.44
ATG17YLR423C PTR2P32901 601 aa6.08□□□□□ -1.44
ATG17YLR423C LAS1P36146 502 aaPredicted RBP6.08□□□□□ -1.44
ATG17YLR423C DAD2P36162 133 aa6.08□□□□□ -1.44
ATG17YLR423C GDT1P38301 280 aaPredicted RBP6.08□□□□□ -1.44
ATG17YLR423C BZZ1P38822 633 aa6.08□□□□□ -1.44
ATG17YLR423C PCF11P39081 626 aaPredicted RBP6.08□□□□□ -1.44
ATG17YLR423C DIM1P41819 318 aaKnown RBP6.08□□□□□ -1.44
ATG17YLR423C EPL1P43572 832 aa6.08□□□□□ -1.44
ATG17YLR423C CUE5Q08412 411 aaKnown RBP6.08□□□□□ -1.44
ATG17YLR423C GEP3Q08622 556 aa6.08□□□□□ -1.44
ATG17YLR423C SKS1Q12505 502 aa6.08□□□□□ -1.44
ATG17YLR423C YCR041WP37265 110 aa6.07□□□□□ -1.44
ATG17YLR423C PFF1P38244 976 aa6.07□□□□□ -1.44
ATG17YLR423C RRP4P38792 359 aaKnown RBP6.07□□□□□ -1.44
ATG17YLR423C PHO86P46956 311 aa6.07□□□□□ -1.44
ATG17YLR423C YIP1P53039 248 aa6.07□□□□□ -1.44
ATG17YLR423C MLC1P53141 149 aa6.07□□□□□ -1.44
ATG17YLR423C YLL056CQ12177 298 aa6.07□□□□□ -1.44
ATG17YLR423C RGT2Q12300 763 aa6.07□□□□□ -1.44
ATG17YLR423C PHO84P25297 587 aaKnown RBP6.06□□□□□ -1.44
ATG17YLR423C YCR043CP25361 127 aa6.06□□□□□ -1.44
ATG17YLR423C YCR100CP25606 316 aa6.06□□□□□ -1.44
ATG17YLR423C RIM2P38127 377 aa6.06□□□□□ -1.44
ATG17YLR423C GWT1P47026 490 aa6.06□□□□□ -1.44
ATG17YLR423C HMS2P47175 358 aa6.06□□□□□ -1.44
ATG17YLR423C GIP3Q03016 1276 aa6.06□□□□□ -1.44
ATG17YLR423C PGC1Q08959 321 aa6.06□□□□□ -1.44
ATG17YLR423C ADE4P04046 510 aaKnown RBP6.05□□□□□ -1.44
ATG17YLR423C SMY1P32364 656 aaKnown RBP6.05□□□□□ -1.44
ATG17YLR423C TES1P41903 349 aaKnown RBP6.05□□□□□ -1.44
ATG17YLR423C MTF1P14908 341 aaKnown RBP6.04□□□□□ -1.44
ATG17YLR423C PCA1P38360 1216 aa6.04□□□□□ -1.44
ATG17YLR423C SHO1P40073 367 aa6.04□□□□□ -1.44
ATG17YLR423C YML122CQ03207 126 aa6.04□□□□□ -1.44
ATG17YLR423C PRP42Q03776 544 aaKnown RBP6.04□□□□□ -1.44
ATG17YLR423C MUM3Q08750 479 aa6.04□□□□□ -1.44
ATG17YLR423C ALG1P16661 449 aa6.03□□□□□ -1.44
ATG17YLR423C TPM1P17536 199 aaKnown RBP6.03□□□□□ -1.44
ATG17YLR423C KRR1P25586 316 aaPredicted RBP6.03□□□□□ -1.44
ATG17YLR423C PHO91P27514 894 aa6.03□□□□□ -1.44
ATG17YLR423C CRM1P30822 1084 aaKnown RBP6.03□□□□□ -1.44
ATG17YLR423C HSP104P31539 908 aaKnown RBP6.03□□□□□ -1.44
ATG17YLR423C NDC1P32500 655 aa6.03□□□□□ -1.44
ATG17YLR423C SMI1P32566 505 aa6.03□□□□□ -1.44
ATG17YLR423C LYS1P38998 373 aaRIP-Chip data6.03□□□□□ -1.44not detected
ATG17YLR423C TOF1P53840 1238 aa6.03□□□□□ -1.44
ATG17YLR423C TAF12Q03761 539 aa6.03□□□□□ -1.44
ATG17YLR423C RPN9Q04062 393 aaKnown RBP6.03□□□□□ -1.44
ATG17YLR423C AFT2Q08957 416 aa6.03□□□□□ -1.44
ATG17YLR423C TFB5Q3E7C1 72 aaPredicted RBP6.03□□□□□ -1.44
ATG17YLR423C COX3P00420 269 aa6.02□□□□□ -1.45
ATG17YLR423C TRX1P22217 103 aaKnown RBP6.02□□□□□ -1.45
ATG17YLR423C NDI1P32340 513 aa6.02□□□□□ -1.45
ATG17YLR423C MRPL4P36517 319 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms