RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W PPM1Q04081 328 aa4.75□□□□□ -1.65
VPS36YLR417W YEH2Q07950 538 aa4.75□□□□□ -1.65
VPS36YLR417W BUG1Q12191 341 aa4.75□□□□□ -1.65
VPS36YLR417W RKM5Q12367 367 aa4.75□□□□□ -1.65
VPS36YLR417W TAD3Q9URQ3 322 aa4.75□□□□□ -1.65
VPS36YLR417W HNM1P19807 563 aa4.74□□□□□ -1.65
VPS36YLR417W MSP1P28737 362 aa4.74□□□□□ -1.65
VPS36YLR417W FAD1P38913 306 aa4.74□□□□□ -1.65
VPS36YLR417W TOF1P53840 1238 aa4.74□□□□□ -1.65
VPS36YLR417W SYO1Q07395 620 aa4.74□□□□□ -1.65
VPS36YLR417W NRT1Q08485 598 aa4.74□□□□□ -1.65
VPS36YLR417W TY1B-DR4Q07793 1604 aa4.73□□□□□ -1.65
VPS36YLR417W PMR1P13586 950 aa4.73□□□□□ -1.65
VPS36YLR417W AMD1P15274 810 aaKnown RBP4.73□□□□□ -1.65
VPS36YLR417W POT1P27796 417 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
VPS36YLR417W ERG1P32476 496 aaKnown RBP4.73□□□□□ -1.65
VPS36YLR417W NIP1P32497 812 aaKnown RBP4.73□□□□□ -1.65
VPS36YLR417W RRN10P38204 145 aa4.73□□□□□ -1.65
VPS36YLR417W WSS1P38838 269 aa4.73□□□□□ -1.65
VPS36YLR417W MEH1Q02205 184 aa4.73□□□□□ -1.65
VPS36YLR417W RPN9Q04062 393 aaKnown RBP4.73□□□□□ -1.65
VPS36YLR417W YDR387CQ04162 555 aa4.73□□□□□ -1.65
VPS36YLR417W YMR087WQ04299 284 aa4.73□□□□□ -1.65
VPS36YLR417W TAF2P23255 1407 aa4.73□□□□□ -1.65
VPS36YLR417W STU1P38198 1513 aa4.73□□□□□ -1.65
VPS36YLR417W THO2P53552 1597 aaKnown RBP4.73□□□□□ -1.65
VPS36YLR417W YFL068WP0CX99 160 aa4.72□□□□□ -1.65
VPS36YLR417W YLL066W-AP0CY00 160 aa4.72□□□□□ -1.65
VPS36YLR417W YLL067W-AP0CY01 160 aa4.72□□□□□ -1.65
VPS36YLR417W VMA2P16140 517 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W RIM1P32445 135 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W FRE1P32791 686 aa4.72□□□□□ -1.65
VPS36YLR417W SOR1P35497 357 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W UIP5P36137 443 aa4.72□□□□□ -1.65
VPS36YLR417W OLA1P38219 394 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W YDR341CQ05506 607 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W MRPL51Q06090 140 aaPredicted RBP4.72□□□□□ -1.65
VPS36YLR417W NDL1Q06568 189 aa4.72□□□□□ -1.65
VPS36YLR417W SOR2Q07786 357 aa4.72□□□□□ -1.65
VPS36YLR417W MLH2Q07980 695 aa4.72□□□□□ -1.65
VPS36YLR417W YDL009CQ12210 107 aa4.72□□□□□ -1.65
VPS36YLR417W HIS4P00815 799 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W ADE4P04046 510 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W PDE2P06776 526 aa4.72□□□□□ -1.65
VPS36YLR417W PHO84P25297 587 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W APE2P32454 952 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W RPS0AP32905 252 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W PCA1P38360 1216 aa4.72□□□□□ -1.65
VPS36YLR417W MLH1P38920 769 aa4.72□□□□□ -1.65
VPS36YLR417W YIR014WP40570 242 aa4.72□□□□□ -1.65
VPS36YLR417W TRS85P46944 698 aa4.72□□□□□ -1.65
VPS36YLR417W YIF1P53845 314 aaKnown RBP4.72□□□□□ -1.65
VPS36YLR417W SEC5P89102 971 aa4.72□□□□□ -1.65
VPS36YLR417W IRC15Q02733 499 aa4.72□□□□□ -1.65
VPS36YLR417W YDR415CQ04033 374 aaPredicted RBP4.72□□□□□ -1.65
VPS36YLR417W RBA50Q04418 439 aa4.72□□□□□ -1.65
VPS36YLR417W VPS74Q06385 345 aa4.72□□□□□ -1.65
VPS36YLR417W COX3P00420 269 aa4.71□□□□□ -1.66
VPS36YLR417W RPI1P23250 407 aaKnown RBP4.71□□□□□ -1.66
VPS36YLR417W ECM25P32525 599 aa4.71□□□□□ -1.66
VPS36YLR417W ASK1P35734 292 aa4.71□□□□□ -1.66
VPS36YLR417W PFF1P38244 976 aa4.71□□□□□ -1.66
VPS36YLR417W YSW1P38280 609 aa4.71□□□□□ -1.66
VPS36YLR417W AZF1P41696 914 aa4.71□□□□□ -1.66
VPS36YLR417W PHO86P46956 311 aa4.71□□□□□ -1.66
VPS36YLR417W YLR281CQ05863 155 aa4.71□□□□□ -1.66
VPS36YLR417W DSE3Q08729 430 aa4.71□□□□□ -1.66
VPS36YLR417W RUP1Q12242 671 aa4.71□□□□□ -1.66
VPS36YLR417W SIN3P22579 1536 aa4.7□□□□□ -1.66
VPS36YLR417W ECM5Q03214 1411 aa4.7□□□□□ -1.66
VPS36YLR417W SMY1P32364 656 aaKnown RBP4.7□□□□□ -1.66
VPS36YLR417W PRS1P32895 427 aaKnown RBP4.7□□□□□ -1.66
VPS36YLR417W RRP1P35178 278 aaPredicted RBP4.7□□□□□ -1.66
VPS36YLR417W MRPL4P36517 319 aa4.7□□□□□ -1.66
VPS36YLR417W SIF2P38262 535 aa4.7□□□□□ -1.66
VPS36YLR417W VPS52P39904 641 aa4.7□□□□□ -1.66
VPS36YLR417W EPL1P43572 832 aa4.7□□□□□ -1.66
VPS36YLR417W FYV8P46949 817 aaKnown RBP4.7□□□□□ -1.66
VPS36YLR417W TAF12Q03761 539 aa4.7□□□□□ -1.66
VPS36YLR417W YDR061WQ12298 539 aa4.7□□□□□ -1.66
VPS36YLR417W POL1P13382 1468 aa4.7□□□□□ -1.66
VPS36YLR417W ALG1P16661 449 aa4.69□□□□□ -1.66
VPS36YLR417W DAP2P18962 818 aa4.69□□□□□ -1.66
VPS36YLR417W SPC110P32380 944 aa4.69□□□□□ -1.66
VPS36YLR417W RSM22P36056 628 aa4.69□□□□□ -1.66
VPS36YLR417W ISC1P40015 477 aaKnown RBP4.69□□□□□ -1.66
VPS36YLR417W YIL152WP40455 235 aa4.69□□□□□ -1.66
VPS36YLR417W PCP1P53259 346 aa4.69□□□□□ -1.66
VPS36YLR417W PNG1Q02890 363 aa4.69□□□□□ -1.66
VPS36YLR417W TFB5Q3E7C1 72 aaPredicted RBP4.69□□□□□ -1.66
VPS36YLR417W HIR3P47171 1648 aa4.69□□□□□ -1.66
VPS36YLR417W GLN3P18494 730 aa4.69□□□□□ -1.66
VPS36YLR417W HSP104P31539 908 aaKnown RBP4.69□□□□□ -1.66
VPS36YLR417W SMI1P32566 505 aa4.69□□□□□ -1.66
VPS36YLR417W ADH5P38113 351 aaKnown RBP4.69□□□□□ -1.66
VPS36YLR417W GAT2P40209 560 aa4.69□□□□□ -1.66
VPS36YLR417W ELP2P42935 788 aa4.69□□□□□ -1.66
VPS36YLR417W YFH1Q07540 174 aa4.69□□□□□ -1.66
VPS36YLR417W REV3P14284 1504 aa4.68□□□□□ -1.66
VPS36YLR417W TRX1P22217 103 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms