RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C ISY1P21374 235 aaPredicted RBP3.49□□□□□ -1.85
SMD3YLR147C TIP1P27654 210 aaPredicted RBP3.49□□□□□ -1.85
SMD3YLR147C ARO2P28777 376 aaKnown RBP3.49□□□□□ -1.85
SMD3YLR147C REC114P32841 428 aa3.49□□□□□ -1.85
SMD3YLR147C SWE1P32944 819 aa3.49□□□□□ -1.85
SMD3YLR147C SDH3P33421 198 aa3.49□□□□□ -1.85
SMD3YLR147C VTC2P43585 828 aa3.49□□□□□ -1.85
SMD3YLR147C HXT11P54862 567 aa3.49□□□□□ -1.85
SMD3YLR147C RPA49Q01080 415 aaPredicted RBP3.49□□□□□ -1.85
SMD3YLR147C GIR2Q03768 265 aaPredicted RBP3.49□□□□□ -1.85
SMD3YLR147C YPR022CQ12139 1133 aa3.49□□□□□ -1.85
SMD3YLR147C PGA3Q12746 312 aaKnown RBP3.49□□□□□ -1.85
SMD3YLR147C RAD61Q99359 647 aa3.49□□□□□ -1.85
SMD3YLR147C CLN3P13365 580 aa3.48□□□□□ -1.85
SMD3YLR147C STB6P36085 766 aa3.48□□□□□ -1.85
SMD3YLR147C RIB5P38145 238 aa3.48□□□□□ -1.85
SMD3YLR147C YBR137WP38276 179 aa3.48□□□□□ -1.85
SMD3YLR147C SAS2P40963 338 aa3.48□□□□□ -1.85
SMD3YLR147C DSL1P53847 754 aa3.48□□□□□ -1.85
SMD3YLR147C SYF1Q04048 859 aaPredicted RBP3.48□□□□□ -1.85
SMD3YLR147C TAF11Q04226 346 aa3.48□□□□□ -1.85
SMD3YLR147C VTA1Q06263 330 aa3.48□□□□□ -1.85
SMD3YLR147C SIL1Q08199 421 aa3.48□□□□□ -1.85
SMD3YLR147C MUM3Q08750 479 aa3.48□□□□□ -1.85
SMD3YLR147C RRG7Q08774 242 aaPredicted RBP3.48□□□□□ -1.85
SMD3YLR147C HRT3Q12347 344 aa3.48□□□□□ -1.85
SMD3YLR147C ADH2P00331 348 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C SUP35P05453 685 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C RPL3P14126 387 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C SPS22P25380 463 aa3.47□□□□□ -1.85
SMD3YLR147C CDC60P26637 1090 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C ERG3P32353 365 aa3.47□□□□□ -1.85
SMD3YLR147C APE2P32454 952 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C RFC3P38629 340 aa3.47□□□□□ -1.85
SMD3YLR147C OTU2P38747 307 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C FAA2P39518 744 aa3.47□□□□□ -1.85
SMD3YLR147C WWM1P43582 211 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C ECM27P47144 725 aa3.47□□□□□ -1.85
SMD3YLR147C SSN8P47821 323 aa3.47□□□□□ -1.85
SMD3YLR147C YIF1P53845 314 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C PAL1Q05518 499 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C TSR2Q06672 205 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C TIM18Q08749 192 aa3.47□□□□□ -1.85
SMD3YLR147C PKH2Q12236 1081 aaKnown RBP3.47□□□□□ -1.85
SMD3YLR147C RTN2Q12443 393 aa3.47□□□□□ -1.85
SMD3YLR147C RTP1Q12751 981 aa3.47□□□□□ -1.85
SMD3YLR147C RML2P32611 393 aa3.46□□□□□ -1.86
SMD3YLR147C PIM1P36775 1133 aa3.46□□□□□ -1.86
SMD3YLR147C VHC1P38329 1120 aa3.46□□□□□ -1.86
SMD3YLR147C PTH1P38876 190 aaKnown RBP3.46□□□□□ -1.86
SMD3YLR147C PRM5P40476 318 aa3.46□□□□□ -1.86
SMD3YLR147C LAM5P43560 674 aa3.46□□□□□ -1.86
SMD3YLR147C DLD2P46681 530 aaKnown RBP3.46□□□□□ -1.86
SMD3YLR147C FRE4P53746 719 aa3.46□□□□□ -1.86
SMD3YLR147C ORT1Q12375 292 aa3.46□□□□□ -1.86
SMD3YLR147C CDC31P06704 161 aaKnown RBP3.45□□□□□ -1.86
SMD3YLR147C RPI1P23250 407 aaKnown RBP3.45□□□□□ -1.86
SMD3YLR147C SNT1P25357 1226 aa3.45□□□□□ -1.86
SMD3YLR147C GEX1P25596 615 aa3.45□□□□□ -1.86
SMD3YLR147C SAS3P34218 831 aa3.45□□□□□ -1.86
SMD3YLR147C LYS1P38998 373 aaRIP-Chip data3.45□□□□□ -1.86not detected
SMD3YLR147C NCA3P46955 337 aa3.45□□□□□ -1.86
SMD3YLR147C SDT1P53078 280 aa3.45□□□□□ -1.86
SMD3YLR147C MTM1P53320 366 aa3.45□□□□□ -1.86
SMD3YLR147C YNR048WP53740 393 aa3.45□□□□□ -1.86
SMD3YLR147C SUB1P54000 292 aaKnown RBP3.45□□□□□ -1.86
SMD3YLR147C HRI1Q05905 244 aaKnown RBP3.45□□□□□ -1.86
SMD3YLR147C MDM30Q05930 598 aa3.45□□□□□ -1.86
SMD3YLR147C COG4Q06096 861 aa3.45□□□□□ -1.86
SMD3YLR147C MHR1Q06630 226 aa3.45□□□□□ -1.86
SMD3YLR147C TMC1Q08422 150 aaPredicted RBP3.45□□□□□ -1.86
SMD3YLR147C HIS4P00815 799 aaKnown RBP3.44□□□□□ -1.86
SMD3YLR147C RED1P14291 827 aa3.44□□□□□ -1.86
SMD3YLR147C SIN4P32259 974 aa3.44□□□□□ -1.86
SMD3YLR147C RPN12P32496 274 aa3.44□□□□□ -1.86
SMD3YLR147C YJR011CP47086 261 aaPredicted RBP3.44□□□□□ -1.86
SMD3YLR147C YMR181CQ03231 154 aa3.44□□□□□ -1.86
SMD3YLR147C PPM1Q04081 328 aa3.44□□□□□ -1.86
SMD3YLR147C RBD2Q12270 262 aa3.44□□□□□ -1.86
SMD3YLR147C RPS8AP0CX39 200 aaKnown RBP3.43□□□□□ -1.86
SMD3YLR147C RPS8BP0CX40 200 aaKnown RBP3.43□□□□□ -1.86
SMD3YLR147C SLY1P22213 666 aa3.43□□□□□ -1.86
SMD3YLR147C HXT1P32465 570 aa3.43□□□□□ -1.86
SMD3YLR147C SPR1P32603 445 aa3.43□□□□□ -1.86
SMD3YLR147C NPL6P32832 435 aa3.43□□□□□ -1.86
SMD3YLR147C HCS1P34243 683 aa3.43□□□□□ -1.86
SMD3YLR147C MSG5P38590 489 aa3.43□□□□□ -1.86
SMD3YLR147C PAN6P40459 309 aa3.43□□□□□ -1.86
SMD3YLR147C FMS1P50264 508 aa3.43□□□□□ -1.86
SMD3YLR147C MNP1P53163 194 aaPredicted RBP3.43□□□□□ -1.86
SMD3YLR147C YLR152CP54072 576 aa3.43□□□□□ -1.86
SMD3YLR147C RMD5Q12508 421 aa3.43□□□□□ -1.86
SMD3YLR147C TEF1P02994 458 aaKnown RBP3.42□□□□□ -1.86
SMD3YLR147C ILV5P06168 395 aaKnown RBP3.42□□□□□ -1.86
SMD3YLR147C PET123P17558 318 aa3.42□□□□□ -1.86
SMD3YLR147C KRE2P27809 442 aa3.42□□□□□ -1.86
SMD3YLR147C YHR054CP38780 354 aa3.42□□□□□ -1.86
SMD3YLR147C MTC6P38849 526 aa3.42□□□□□ -1.86
SMD3YLR147C TIS11P47977 285 aa3.42□□□□□ -1.86
SMD3YLR147C HER2Q03557 464 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms