RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W UBP8P50102 471 aa1.92□□□□□ -2.1
CFT2YLR115W RRT6P53117 311 aaPredicted RBP1.92□□□□□ -2.1
CFT2YLR115W HEF3P53978 1044 aaKnown RBP1.92□□□□□ -2.1
CFT2YLR115W CSI1Q04368 295 aa1.92□□□□□ -2.1
CFT2YLR115W KAP95Q06142 861 aaKnown RBP1.92□□□□□ -2.1
CFT2YLR115W ECM7Q06200 448 aa1.92□□□□□ -2.1
CFT2YLR115W GGA1Q06336 557 aa1.92□□□□□ -2.1
CFT2YLR115W POS5Q06892 414 aa1.92□□□□□ -2.1
CFT2YLR115W VAM6Q07468 1049 aa1.92□□□□□ -2.1
CFT2YLR115W RRT8Q08219 342 aa1.92□□□□□ -2.1
CFT2YLR115W YMR230W-AQ3E7B5 62 aa1.92□□□□□ -2.1
CFT2YLR115W PHO2P07269 559 aa1.92□□□□□ -2.1
CFT2YLR115W RPL3P14126 387 aaKnown RBP1.92□□□□□ -2.1
CFT2YLR115W CLN1P20437 546 aa1.92□□□□□ -2.1
CFT2YLR115W BMH2P34730 273 aaKnown RBP1.92□□□□□ -2.1
CFT2YLR115W UBP13P38187 747 aa1.92□□□□□ -2.1
CFT2YLR115W ROK1P45818 564 aaPredicted RBP1.92□□□□□ -2.1
CFT2YLR115W YNL050CP53952 270 aa1.92□□□□□ -2.1
CFT2YLR115W REG1Q00816 1014 aa1.92□□□□□ -2.1
CFT2YLR115W RRN11Q04712 507 aa1.92□□□□□ -2.1
CFT2YLR115W YMR254CQ04838 102 aa1.92□□□□□ -2.1
CFT2YLR115W ROY1Q04847 553 aa1.92□□□□□ -2.1
CFT2YLR115W YMR317WQ04893 1140 aa1.92□□□□□ -2.1
CFT2YLR115W AVL9Q12500 764 aa1.92□□□□□ -2.1
CFT2YLR115W DFR1P07807 211 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CFT2YLR115W SAM1P10659 382 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W MRP2P10663 115 aaPredicted RBP1.91□□□□□ -2.1
CFT2YLR115W APE1P14904 514 aa1.91□□□□□ -2.1
CFT2YLR115W TAL1P15019 335 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W PPZ1P26570 692 aa1.91□□□□□ -2.1
CFT2YLR115W CDC15P27636 974 aa1.91□□□□□ -2.1
CFT2YLR115W ERV1P27882 189 aa1.91□□□□□ -2.1
CFT2YLR115W SUA5P32579 426 aa1.91□□□□□ -2.1
CFT2YLR115W ECM4P36156 370 aa1.91□□□□□ -2.1
CFT2YLR115W MAL33P38157 468 aa1.91□□□□□ -2.1
CFT2YLR115W SIP3P38717 1229 aa1.91□□□□□ -2.1
CFT2YLR115W RTT107P38850 1070 aa1.91□□□□□ -2.1
CFT2YLR115W YRB1P41920 201 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W GCN20P43535 752 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W FET5P43561 622 aa1.91□□□□□ -2.1
CFT2YLR115W ALT2P52892 507 aa1.91□□□□□ -2.1
CFT2YLR115W VPS4P52917 437 aa1.91□□□□□ -2.1
CFT2YLR115W RMD9P53140 646 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W GIS2P53849 153 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CFT2YLR115W KAP120Q02932 1032 aa1.91□□□□□ -2.1
CFT2YLR115W ARX1Q03862 593 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W BUD22Q04347 519 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W RCO1Q04779 684 aa1.91□□□□□ -2.1
CFT2YLR115W CRN1Q06440 651 aa1.91□□□□□ -2.1
CFT2YLR115W ATG29Q12092 213 aa1.91□□□□□ -2.1
CFT2YLR115W TY3A-GQ12173 290 aa1.91□□□□□ -2.1
CFT2YLR115W TY3A-IQ99219 290 aa1.91□□□□□ -2.1
CFT2YLR115W ATP2P00830 511 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W CBP1P07252 654 aa1.91□□□□□ -2.1
CFT2YLR115W FUS3P16892 353 aaKnown RBP1.91□□□□□ -2.1
CFT2YLR115W SPS22P25380 463 aa1.91□□□□□ -2.1
CFT2YLR115W ICL1P28240 557 aaPredicted RBP1.91□□□□□ -2.1
CFT2YLR115W MRP20P32387 263 aa1.91□□□□□ -2.1
CFT2YLR115W ATP11P32453 318 aa1.91□□□□□ -2.1
CFT2YLR115W HCS1P34243 683 aa1.91□□□□□ -2.1
CFT2YLR115W HEL1P36113 551 aa1.91□□□□□ -2.1
CFT2YLR115W AGP2P38090 596 aa1.91□□□□□ -2.1
CFT2YLR115W LIN1P38852 340 aaPredicted RBP1.91□□□□□ -2.1
CFT2YLR115W END3P39013 349 aa1.91□□□□□ -2.1
CFT2YLR115W MET18P40469 1032 aa1.91□□□□□ -2.1
CFT2YLR115W INA22P40576 216 aa1.91□□□□□ -2.1
CFT2YLR115W HXT9P40885 567 aa1.91□□□□□ -2.1
CFT2YLR115W CHS6P40955 746 aa1.91□□□□□ -2.1
CFT2YLR115W TCB2P48231 1178 aa1.91□□□□□ -2.1
CFT2YLR115W LYS4P49367 693 aaPredicted RBP1.91□□□□□ -2.1
CFT2YLR115W YGL114WP53134 725 aa1.91□□□□□ -2.1
CFT2YLR115W YML037CQ03703 340 aa1.91□□□□□ -2.1
CFT2YLR115W YLR297WQ05899 129 aa1.91□□□□□ -2.1
CFT2YLR115W NMD4Q12129 218 aa1.91□□□□□ -2.1
CFT2YLR115W BUG1Q12191 341 aa1.91□□□□□ -2.1
CFT2YLR115W YOL107WQ12239 342 aa1.91□□□□□ -2.1
CFT2YLR115W GLE1Q12315 538 aa1.91□□□□□ -2.1
CFT2YLR115W YJR112W-AQ3E743 109 aa1.91□□□□□ -2.1
CFT2YLR115W YOL159C-AQ3E769 90 aa1.91□□□□□ -2.1
CFT2YLR115W CAR2P07991 424 aaKnown RBP1.9□□□□□ -2.11
CFT2YLR115W TY2A-LR1P0C2J4 438 aa1.9□□□□□ -2.11
CFT2YLR115W TY2A-FP0CX61 438 aa1.9□□□□□ -2.11
CFT2YLR115W TY2A-GR2P0CX62 438 aa1.9□□□□□ -2.11
CFT2YLR115W RPL19AP0CX82 189 aaKnown RBP1.9□□□□□ -2.11
CFT2YLR115W RPL19BP0CX83 189 aaPredicted RBP1.9□□□□□ -2.11
CFT2YLR115W UNG1P12887 359 aa1.9□□□□□ -2.11
CFT2YLR115W BUD5P25300 642 aaPredicted RBP1.9□□□□□ -2.11
CFT2YLR115W ADH7P25377 361 aa1.9□□□□□ -2.11
CFT2YLR115W TY2A-CP25383 438 aa1.9□□□□□ -2.11
CFT2YLR115W RDS1P25611 832 aa1.9□□□□□ -2.11
CFT2YLR115W MSN4P33749 630 aa1.9□□□□□ -2.11
CFT2YLR115W YBL055CP34220 418 aaPredicted RBP1.9□□□□□ -2.11
CFT2YLR115W YKL071WP36086 256 aa1.9□□□□□ -2.11
CFT2YLR115W ALY1P36117 915 aa1.9□□□□□ -2.11
CFT2YLR115W FMP46P36141 133 aaKnown RBP1.9□□□□□ -2.11
CFT2YLR115W STV1P37296 890 aa1.9□□□□□ -2.11
CFT2YLR115W ADE17P38009 592 aaKnown RBP1.9□□□□□ -2.11
CFT2YLR115W PEX32P38292 413 aa1.9□□□□□ -2.11
CFT2YLR115W NTC20P38302 140 aaPredicted RBP1.9□□□□□ -2.11
CFT2YLR115W MRX1P40050 688 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms