RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C RPS27BP38711 82 aa4.8□□□□□ -1.64
BUD28YLR062C PTI1P39927 425 aaPredicted RBP4.8□□□□□ -1.64
BUD28YLR062C NEO1P40527 1151 aa4.8□□□□□ -1.64
BUD28YLR062C IKS1P47042 667 aa4.8□□□□□ -1.64
BUD28YLR062C MAD3P47074 515 aa4.8□□□□□ -1.64
BUD28YLR062C ROG1P53118 685 aa4.8□□□□□ -1.64
BUD28YLR062C YGR053CP53234 283 aa4.8□□□□□ -1.64
BUD28YLR062C UBX4P54730 416 aa4.8□□□□□ -1.64
BUD28YLR062C ERG13P54839 491 aaKnown RBP4.8□□□□□ -1.64
BUD28YLR062C YMR111CQ04461 462 aaPredicted RBP4.8□□□□□ -1.64
BUD28YLR062C YDR338CQ05497 695 aa4.8□□□□□ -1.64
BUD28YLR062C ENT2Q05785 613 aa4.8□□□□□ -1.64
BUD28YLR062C SFH1Q06168 426 aa4.8□□□□□ -1.64
BUD28YLR062C REX4Q08237 289 aa4.8□□□□□ -1.64
BUD28YLR062C YOL159CQ08300 171 aa4.8□□□□□ -1.64
BUD28YLR062C PUS9Q12069 462 aa4.8□□□□□ -1.64
BUD28YLR062C NMD4Q12129 218 aa4.8□□□□□ -1.64
BUD28YLR062C RUP1Q12242 671 aa4.8□□□□□ -1.64
BUD28YLR062C GLO4Q12320 285 aa4.8□□□□□ -1.64
BUD28YLR062C NCA2Q12374 616 aa4.8□□□□□ -1.64
BUD28YLR062C COX1P00401 534 aa4.79□□□□□ -1.64
BUD28YLR062C HXK2P04807 486 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C TY2A-LR1P0C2J4 438 aa4.79□□□□□ -1.64
BUD28YLR062C COS2P0CX12 379 aa4.79□□□□□ -1.64
BUD28YLR062C COS3P0CX13 379 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-FP0CX61 438 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-GR2P0CX62 438 aa4.79□□□□□ -1.64
BUD28YLR062C PRI2P20457 528 aa4.79□□□□□ -1.64
BUD28YLR062C RPB10P22139 70 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-CP25383 438 aa4.79□□□□□ -1.64
BUD28YLR062C TAH1P25638 111 aaPredicted RBP4.79□□□□□ -1.64
BUD28YLR062C HEM3P28789 327 aa4.79□□□□□ -1.64
BUD28YLR062C FAA1P30624 700 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C YMC1P32331 307 aa4.79□□□□□ -1.64
BUD28YLR062C MKK2P32491 506 aa4.79□□□□□ -1.64
BUD28YLR062C NIP1P32497 812 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C SUI1P32911 108 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C SEF1P34228 1148 aa4.79□□□□□ -1.64
BUD28YLR062C HES1P35843 434 aa4.79□□□□□ -1.64
BUD28YLR062C SEC31P38968 1273 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C MET18P40469 1032 aa4.79□□□□□ -1.64
BUD28YLR062C PAC11P40960 533 aa4.79□□□□□ -1.64
BUD28YLR062C RPL10P41805 221 aaKnown RBP4.79□□□□□ -1.64
BUD28YLR062C COS4P43542 379 aa4.79□□□□□ -1.64
BUD28YLR062C CUZ1P53899 274 aa4.79□□□□□ -1.64
BUD28YLR062C PRP38Q00723 242 aaPredicted RBP4.79□□□□□ -1.64
BUD28YLR062C TY2A-DR2Q03483 438 aa4.79□□□□□ -1.64
BUD28YLR062C TPP1Q03796 238 aa4.79□□□□□ -1.64
BUD28YLR062C BSC2Q05611 235 aa4.79□□□□□ -1.64
BUD28YLR062C PDR8Q06149 701 aa4.79□□□□□ -1.64
BUD28YLR062C BOP2Q06150 570 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-BQ12260 438 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-OR2Q12293 438 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-DR1Q12392 438 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-OR1Q12439 438 aa4.79□□□□□ -1.64
BUD28YLR062C YPR064WQ12492 139 aa4.79□□□□□ -1.64
BUD28YLR062C LSO1Q3E827 93 aa4.79□□□□□ -1.64
BUD28YLR062C TY2A-DR3Q99303 438 aa4.79□□□□□ -1.64
BUD28YLR062C Q0010Q9ZZX9 128 aa4.79□□□□□ -1.64
BUD28YLR062C YPT1P01123 206 aaKnown RBP4.78□□□□□ -1.64
BUD28YLR062C COR1P07256 457 aa4.78□□□□□ -1.64
BUD28YLR062C KAR1P11927 433 aa4.78□□□□□ -1.64
BUD28YLR062C GCD2P12754 651 aaPredicted RBP4.78□□□□□ -1.64
BUD28YLR062C CDC26P14724 124 aa4.78□□□□□ -1.64
BUD28YLR062C DIT1P21623 536 aa4.78□□□□□ -1.64
BUD28YLR062C OCA4P25366 362 aa4.78□□□□□ -1.64
BUD28YLR062C BUB2P26448 306 aaPredicted RBP4.78□□□□□ -1.64
BUD28YLR062C SSH4P32343 579 aa4.78□□□□□ -1.64
BUD28YLR062C CDC12P32468 407 aaKnown RBP4.78□□□□□ -1.64
BUD28YLR062C PET127P32606 800 aa4.78□□□□□ -1.64
BUD28YLR062C LST4P34239 828 aa4.78□□□□□ -1.64
BUD28YLR062C OAR1P35731 278 aa4.78□□□□□ -1.64
BUD28YLR062C OMA1P36163 345 aa4.78□□□□□ -1.64
BUD28YLR062C MBP1P39678 833 aa4.78□□□□□ -1.64
BUD28YLR062C PRP39P39682 629 aaKnown RBP4.78□□□□□ -1.64
BUD28YLR062C PRM10P42946 383 aa4.78□□□□□ -1.64
BUD28YLR062C BIO3P50277 480 aa4.78□□□□□ -1.64
BUD28YLR062C SDT1P53078 280 aa4.78□□□□□ -1.64
BUD28YLR062C YNL140CP53910 189 aa4.78□□□□□ -1.64
BUD28YLR062C TVP15Q03860 143 aa4.78□□□□□ -1.64
BUD28YLR062C MDM30Q05930 598 aa4.78□□□□□ -1.64
BUD28YLR062C YDL121CQ07541 149 aa4.78□□□□□ -1.64
BUD28YLR062C YOR223WQ12015 292 aa4.78□□□□□ -1.64
BUD28YLR062C YLL054CQ12244 843 aa4.78□□□□□ -1.64
BUD28YLR062C TRP3P00937 484 aa4.77□□□□□ -1.65
BUD28YLR062C DST1P07273 309 aa4.77□□□□□ -1.65
BUD28YLR062C YMR085WP0CF18 432 aa4.77□□□□□ -1.65
BUD28YLR062C VPS33P20795 691 aa4.77□□□□□ -1.65
BUD28YLR062C SEC62P21825 274 aa4.77□□□□□ -1.65
BUD28YLR062C FPS1P23900 669 aa4.77□□□□□ -1.65
BUD28YLR062C SLM5P25345 492 aaKnown RBP4.77□□□□□ -1.65
BUD28YLR062C SPB1P25582 841 aaPredicted RBP4.77□□□□□ -1.65
BUD28YLR062C YJU2P28320 278 aaPredicted RBP4.77□□□□□ -1.65
BUD28YLR062C ORC2P32833 620 aa4.77□□□□□ -1.65
BUD28YLR062C BNA4P38169 460 aa4.77□□□□□ -1.65
BUD28YLR062C ATG7P38862 630 aa4.77□□□□□ -1.65
BUD28YLR062C ARB1P40024 610 aaKnown RBP4.77□□□□□ -1.65
BUD28YLR062C SCS2P40075 244 aaKnown RBP4.77□□□□□ -1.65
BUD28YLR062C TIM54P47045 478 aa4.77□□□□□ -1.65
BUD28YLR062C AIM22P47051 409 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms