RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	MDL1	P33310	695 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	HXT9	P40885	567 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	SNO3	P43544	222 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	TCB2	P48231	1178 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	IDP3	P53982	420 aa	Known RBP	4.95	□□□□□ -1.62
SPC34	YKR037C	OAZ1	Q02803	292 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	ARP10	Q04549	284 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	SOV1	Q04748	898 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	MCP2	Q06567	569 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	RDR1	Q08904	546 aa		4.95	□□□□□ -1.62
SPC34	YKR037C	COR1	P07256	457 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	PEP4	P07267	405 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	NAT1	P12945	854 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	PRP2	P20095	876 aa	Predicted RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	CPR2	P23285	205 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	RAD14	P28519	371 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	TVP38	P36164	337 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	VPS45	P38932	577 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	MBB1	P39534	108 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	GDI1	P39958	451 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	HMF1	P40037	129 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	ALK1	P43633	760 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	YJL055W	P47044	245 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	PYK2	P52489	506 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	SMM1	P53720	384 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	IMP4	P53941	290 aa	Known RBP	4.94	□□□□□ -1.62
SPC34	YKR037C	RSC9	Q03124	581 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	YMR160W	Q03823	816 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	DON1	Q05610	365 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	YDL218W	Q07629	317 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	SIL1	Q08199	421 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	THP1	Q08231	455 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	YPL278C	Q08990	100 aa		4.94	□□□□□ -1.62
SPC34	YKR037C	NCE102	Q12207	173 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
SPC34	YKR037C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
SPC34	YKR037C	SPB1	P25582	841 aa	Predicted RBP	4.93	□□□□□ -1.62
SPC34	YKR037C	AFG1	P32317	509 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	DPH2	P32461	534 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	CSE2	P33308	149 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	YKL023W	P36103	277 aa	Known RBP	4.93	□□□□□ -1.62
SPC34	YKR037C	RXT2	P38255	430 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	CAK1	P43568	368 aa	Predicted RBP	4.93	□□□□□ -1.62
SPC34	YKR037C	ATG27	P46989	271 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	VPS25	P47142	202 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	GPM3	Q12326	303 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	CTF3	Q12748	733 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	RAD61	Q99359	647 aa		4.93	□□□□□ -1.62
SPC34	YKR037C	POL2	P21951	2222 aa	Known RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	MAS1	P10507	462 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	SRV2	P17555	526 aa	Known RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	IDH2	P28241	369 aa	Known RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	RAD24	P32641	659 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	NTC20	P38302	140 aa	Predicted RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	ULP2	P40537	1034 aa	Predicted RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	YGR149W	P48236	432 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	YGL138C	P53122	345 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	PKP2	P53170	491 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	COP1	P53622	1201 aa	Known RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	RRP45	Q05636	305 aa	Known RBP	4.92	□□□□□ -1.62
SPC34	YKR037C	POS5	Q06892	414 aa		4.92	□□□□□ -1.62
SPC34	YKR037C	YBR056W-A	I2HB52	66 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	ATP1	P07251	545 aa	Known RBP	4.91	□□□□□ -1.62
SPC34	YKR037C	SPS4	P09937	338 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	YIM1	P28625	365 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	RRT2	P38332	387 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	YHR210C	P38893	341 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	SEC28	P40509	296 aa	Known RBP	4.91	□□□□□ -1.62
SPC34	YKR037C	VMA13	P41807	478 aa	Known RBP	4.91	□□□□□ -1.62
SPC34	YKR037C	YPT11	P48559	417 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	FMS1	P50264	508 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	YGL108C	P53139	140 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	LSB1	P53281	241 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	ERG13	P54839	491 aa	Known RBP	4.91	□□□□□ -1.62
SPC34	YKR037C	SHR3	Q02774	210 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	YLR112W	Q12130	139 aa		4.91	□□□□□ -1.62
SPC34	YKR037C	SEC16	P48415	2195 aa	Known RBP	4.9	□□□□□ -1.62
SPC34	YKR037C	PGK1	P00560	416 aa	Known RBP	4.9	□□□□□ -1.63
SPC34	YKR037C	DAL5	P15365	543 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	SNT1	P25357	1226 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	SCO2	P38072	301 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	THI2	P38141	450 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	BNA4	P38169	460 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	LAG1	P38703	411 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	FLO5	P38894	1075 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	ZPR1	P53303	486 aa	Known RBP	4.9	□□□□□ -1.63
SPC34	YKR037C	BUD32	P53323	261 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	YNL234W	P53857	426 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	CAC2	Q04199	468 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	SUE1	Q06524	206 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	PLP2	Q12017	286 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	VPS54	Q12071	889 aa		4.9	□□□□□ -1.63
SPC34	YKR037C	SPE3	Q12074	293 aa	Known RBP	4.9	□□□□□ -1.63
SPC34	YKR037C	PKH2	Q12236	1081 aa	Known RBP	4.9	□□□□□ -1.63
SPC34	YKR037C	PEP5	P12868	1029 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	CYM1	P32898	989 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	TCM62	P38228	572 aa	Known RBP	4.89	□□□□□ -1.63
SPC34	YKR037C	PHO90	P39535	881 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	EFM4	P40516	257 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	YIL024C	P40543	189 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	URB2	P47108	1174 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms