RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C YCR022CP25620 114 aa2.37□□□□□ -2.03
TPM2YIL138C BUB3P26449 341 aa2.37□□□□□ -2.03
TPM2YIL138C FRE2P36033 711 aa2.37□□□□□ -2.03
TPM2YIL138C THI2P38141 450 aa2.37□□□□□ -2.03
TPM2YIL138C NDT80P38830 627 aa2.37□□□□□ -2.03
TPM2YIL138C ISC1P40015 477 aaKnown RBP2.37□□□□□ -2.03
TPM2YIL138C LSM5P40089 93 aaKnown RBP2.37□□□□□ -2.03
TPM2YIL138C FAU1P40099 211 aa2.37□□□□□ -2.03
TPM2YIL138C YMR147WP40218 223 aaKnown RBP2.37□□□□□ -2.03
TPM2YIL138C TIS11P47977 285 aa2.37□□□□□ -2.03
TPM2YIL138C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TPM2YIL138C KEL3Q08979 651 aaPredicted RBP2.37□□□□□ -2.03
TPM2YIL138C YLR278CQ05854 1341 aa2.37□□□□□ -2.03
TPM2YIL138C REV3P14284 1504 aa2.37□□□□□ -2.03
TPM2YIL138C GPH1P06738 902 aaKnown RBP2.36□□□□□ -2.03
TPM2YIL138C CLC1P17891 233 aa2.36□□□□□ -2.03
TPM2YIL138C ARO2P28777 376 aaKnown RBP2.36□□□□□ -2.03
TPM2YIL138C GYP6P32806 458 aa2.36□□□□□ -2.03
TPM2YIL138C NIP100P33420 868 aa2.36□□□□□ -2.03
TPM2YIL138C ARA1P38115 344 aa2.36□□□□□ -2.03
TPM2YIL138C NTC20P38302 140 aaPredicted RBP2.36□□□□□ -2.03
TPM2YIL138C VHC1P38329 1120 aa2.36□□□□□ -2.03
TPM2YIL138C GWT1P47026 490 aa2.36□□□□□ -2.03
TPM2YIL138C FMS1P50264 508 aa2.36□□□□□ -2.03
TPM2YIL138C DSL1P53847 754 aa2.36□□□□□ -2.03
TPM2YIL138C NCS2P53923 493 aaPredicted RBP2.36□□□□□ -2.03
TPM2YIL138C KTR5P53966 522 aaPredicted RBP2.36□□□□□ -2.03
TPM2YIL138C RRP45Q05636 305 aaKnown RBP2.36□□□□□ -2.03
TPM2YIL138C RRG7Q08774 242 aaPredicted RBP2.36□□□□□ -2.03
TPM2YIL138C ERV2Q12284 196 aa2.36□□□□□ -2.03
TPM2YIL138C CTF3Q12748 733 aa2.36□□□□□ -2.03
TPM2YIL138C DNA2P38859 1522 aa2.36□□□□□ -2.03
TPM2YIL138C YAR066WP0CX18 203 aa2.35□□□□□ -2.03
TPM2YIL138C YHR214WP0CX19 203 aa2.35□□□□□ -2.03
TPM2YIL138C PDX1P16451 410 aa2.35□□□□□ -2.03
TPM2YIL138C RNA14P25298 677 aaKnown RBP2.35□□□□□ -2.03
TPM2YIL138C RPC53P25441 422 aa2.35□□□□□ -2.03
TPM2YIL138C YCR051WP25631 222 aa2.35□□□□□ -2.03
TPM2YIL138C DBF4P32325 704 aa2.35□□□□□ -2.03
TPM2YIL138C RML2P32611 393 aa2.35□□□□□ -2.03
TPM2YIL138C STB6P36085 766 aa2.35□□□□□ -2.03
TPM2YIL138C HAT2P39984 401 aa2.35□□□□□ -2.03
TPM2YIL138C VMA13P41807 478 aaKnown RBP2.35□□□□□ -2.03
TPM2YIL138C YGL138CP53122 345 aa2.35□□□□□ -2.03
TPM2YIL138C YGR250CP53316 781 aaKnown RBP2.35□□□□□ -2.03
TPM2YIL138C ARK1P53974 638 aa2.35□□□□□ -2.03
TPM2YIL138C ELP3Q02908 557 aaKnown RBP2.35□□□□□ -2.03
TPM2YIL138C PIR3Q03180 325 aa2.35□□□□□ -2.03
TPM2YIL138C ARX1Q03862 593 aaKnown RBP2.35□□□□□ -2.03
TPM2YIL138C YDR387CQ04162 555 aa2.35□□□□□ -2.03
TPM2YIL138C SOV1Q04748 898 aa2.35□□□□□ -2.03
TPM2YIL138C PBA1Q05778 276 aa2.35□□□□□ -2.03
TPM2YIL138C AFI1Q99222 893 aa2.35□□□□□ -2.03
TPM2YIL138C KOG1P38873 1557 aa2.35□□□□□ -2.03
TPM2YIL138C CPR1P14832 162 aaKnown RBP2.34□□□□□ -2.03
TPM2YIL138C RPI1P23250 407 aaKnown RBP2.34□□□□□ -2.03
TPM2YIL138C TFB1P32776 642 aa2.34□□□□□ -2.03
TPM2YIL138C YME2P32843 850 aa2.34□□□□□ -2.03
TPM2YIL138C TFG2P41896 400 aaPredicted RBP2.34□□□□□ -2.03
TPM2YIL138C POP6P53218 158 aa2.34□□□□□ -2.03
TPM2YIL138C OGG1P53397 376 aaPredicted RBP2.34□□□□□ -2.03
TPM2YIL138C YIF1P53845 314 aaKnown RBP2.34□□□□□ -2.03
TPM2YIL138C BNI5P53890 448 aaKnown RBP2.34□□□□□ -2.03
TPM2YIL138C PNG1Q02890 363 aa2.34□□□□□ -2.03
TPM2YIL138C KAP120Q02932 1032 aa2.34□□□□□ -2.03
TPM2YIL138C RMT2Q03305 412 aa2.34□□□□□ -2.03
TPM2YIL138C HSP31Q04432 237 aa2.34□□□□□ -2.03
TPM2YIL138C ROY1Q04847 553 aa2.34□□□□□ -2.03
TPM2YIL138C TMS1Q12116 473 aa2.34□□□□□ -2.03
TPM2YIL138C HRT3Q12347 344 aa2.34□□□□□ -2.03
TPM2YIL138C RRD2Q12461 358 aa2.34□□□□□ -2.03
TPM2YIL138C THO2P53552 1597 aaKnown RBP2.34□□□□□ -2.03
TPM2YIL138C SSK2P53599 1579 aa2.34□□□□□ -2.03
TPM2YIL138C BUD4P47136 1447 aa2.34□□□□□ -2.04
TPM2YIL138C RIP1P08067 215 aa2.33□□□□□ -2.04
TPM2YIL138C YCR100CP25606 316 aa2.33□□□□□ -2.04
TPM2YIL138C ADK2P26364 225 aa2.33□□□□□ -2.04
TPM2YIL138C CRM1P30822 1084 aaKnown RBP2.33□□□□□ -2.04
TPM2YIL138C NDI1P32340 513 aa2.33□□□□□ -2.04
TPM2YIL138C APE2P32454 952 aaKnown RBP2.33□□□□□ -2.04
TPM2YIL138C PRP21P32524 280 aaPredicted RBP2.33□□□□□ -2.04
TPM2YIL138C YCR041WP37265 110 aa2.33□□□□□ -2.04
TPM2YIL138C RPS0BP46654 252 aaKnown RBP2.33□□□□□ -2.04
TPM2YIL138C AVT4P50944 713 aa2.33□□□□□ -2.04
TPM2YIL138C PCP1P53259 346 aa2.33□□□□□ -2.04
TPM2YIL138C ERB1Q04660 807 aaKnown RBP2.33□□□□□ -2.04
TPM2YIL138C VAM3Q12241 283 aa2.33□□□□□ -2.04
TPM2YIL138C HSP42Q12329 375 aa2.33□□□□□ -2.04
TPM2YIL138C ISA2Q12425 185 aa2.33□□□□□ -2.04
TPM2YIL138C CHD1P32657 1468 aa2.33□□□□□ -2.04
TPM2YIL138C CLB1P24868 471 aa2.32□□□□□ -2.04
TPM2YIL138C RHB1P25378 209 aa2.32□□□□□ -2.04
TPM2YIL138C BEM1P29366 551 aa2.32□□□□□ -2.04
TPM2YIL138C GLC7P32598 312 aaKnown RBP2.32□□□□□ -2.04
TPM2YIL138C MRP4P32902 394 aa2.32□□□□□ -2.04
TPM2YIL138C APE3P37302 537 aaKnown RBP2.32□□□□□ -2.04
TPM2YIL138C SWD3P38123 315 aa2.32□□□□□ -2.04
TPM2YIL138C MMS4P38257 691 aa2.32□□□□□ -2.04
TPM2YIL138C YHR054CP38780 354 aa2.32□□□□□ -2.04
TPM2YIL138C CCT2P39076 527 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms