RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YIL177CP40434 1758 aa1.27□□□□□ -2.21
SWI4YER111C YJL225CP40889 1758 aa1.27□□□□□ -2.21
SWI4YER111C SEC62P21825 274 aa1.27□□□□□ -2.21
SWI4YER111C POT1P27796 417 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
SWI4YER111C ZTA1P38230 334 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C YHR210CP38893 341 aa1.27□□□□□ -2.21
SWI4YER111C PCF11P39081 626 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C ISC1P40015 477 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C GPI8P49018 411 aa1.27□□□□□ -2.21
SWI4YER111C ROG1P53118 685 aa1.27□□□□□ -2.21
SWI4YER111C PCP1P53259 346 aa1.27□□□□□ -2.21
SWI4YER111C GPI1P53306 609 aa1.27□□□□□ -2.21
SWI4YER111C AQR1P53943 586 aa1.27□□□□□ -2.21
SWI4YER111C GIP3Q03016 1276 aa1.27□□□□□ -2.21
SWI4YER111C EKI1Q03764 534 aa1.27□□□□□ -2.21
SWI4YER111C RPN9Q04062 393 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C TAP42Q04372 366 aa1.27□□□□□ -2.21
SWI4YER111C PHO92Q06390 306 aa1.27□□□□□ -2.21
SWI4YER111C PML1Q07930 204 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C OSW1Q08692 278 aa1.27□□□□□ -2.21
SWI4YER111C UAF30Q08747 228 aa1.27□□□□□ -2.21
SWI4YER111C CRC1Q12289 327 aa1.27□□□□□ -2.21
SWI4YER111C TFB5Q3E7C1 72 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C NUP159P40477 1460 aa1.27□□□□□ -2.21
SWI4YER111C CAR1P00812 333 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C RPL42AP0CX27 106 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C RPL42BP0CX28 106 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C BAR1P12630 587 aa1.27□□□□□ -2.21
SWI4YER111C CLB2P24869 491 aa1.27□□□□□ -2.21
SWI4YER111C RRN10P38204 145 aa1.27□□□□□ -2.21
SWI4YER111C GDT1P38301 280 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C ARP1P38696 384 aa1.27□□□□□ -2.21
SWI4YER111C GND1P38720 489 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C RRP4P38792 359 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C YER130CP39959 443 aa1.27□□□□□ -2.21
SWI4YER111C YIL024CP40543 189 aa1.27□□□□□ -2.21
SWI4YER111C TFG2P41896 400 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C NMD5P46970 1048 aa1.27□□□□□ -2.21
SWI4YER111C MDE1P47095 244 aa1.27□□□□□ -2.21
SWI4YER111C PYK2P52489 506 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C COP1P53622 1201 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C NCS2P53923 493 aaPredicted RBP1.27□□□□□ -2.21
SWI4YER111C RSC9Q03124 581 aa1.27□□□□□ -2.21
SWI4YER111C CTL1Q03220 320 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C DBP9Q06218 594 aaKnown RBP1.27□□□□□ -2.21
SWI4YER111C REX3Q12090 404 aa1.27□□□□□ -2.21
SWI4YER111C CDC21P06785 304 aa1.26□□□□□ -2.21
SWI4YER111C VMA2P16140 517 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C TYR1P20049 452 aa1.26□□□□□ -2.21
SWI4YER111C SGV1P23293 657 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C PTP1P25044 335 aa1.26□□□□□ -2.21
SWI4YER111C PHO91P27514 894 aa1.26□□□□□ -2.21
SWI4YER111C GYP6P32806 458 aa1.26□□□□□ -2.21
SWI4YER111C TRS65P32893 560 aa1.26□□□□□ -2.21
SWI4YER111C SOR1P35497 357 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C PHD1P36093 366 aa1.26□□□□□ -2.21
SWI4YER111C FLO10P36170 1169 aa1.26□□□□□ -2.21
SWI4YER111C MRPL4P36517 319 aa1.26□□□□□ -2.21
SWI4YER111C YSW1P38280 609 aa1.26□□□□□ -2.21
SWI4YER111C VPS41P38959 992 aa1.26□□□□□ -2.21
SWI4YER111C MPP10P47083 593 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C HMS2P47175 358 aa1.26□□□□□ -2.21
SWI4YER111C HST1P53685 503 aa1.26□□□□□ -2.21
SWI4YER111C TDA7P53882 636 aaPredicted RBP1.26□□□□□ -2.21
SWI4YER111C KTR5P53966 522 aaPredicted RBP1.26□□□□□ -2.21
SWI4YER111C THI7Q05998 598 aa1.26□□□□□ -2.21
SWI4YER111C SOR2Q07786 357 aa1.26□□□□□ -2.21
SWI4YER111C GSH2Q08220 491 aa1.26□□□□□ -2.21
SWI4YER111C YLL056CQ12177 298 aa1.26□□□□□ -2.21
SWI4YER111C MDY2Q12285 212 aa1.26□□□□□ -2.21
SWI4YER111C GLE1Q12315 538 aa1.26□□□□□ -2.21
SWI4YER111C GSC2P40989 1895 aa1.26□□□□□ -2.21
SWI4YER111C YAR066WP0CX18 203 aa1.26□□□□□ -2.21
SWI4YER111C YHR214WP0CX19 203 aa1.26□□□□□ -2.21
SWI4YER111C HNM1P19807 563 aa1.26□□□□□ -2.21
SWI4YER111C GRR1P24814 1151 aa1.26□□□□□ -2.21
SWI4YER111C ILV6P25605 309 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C KRE2P27809 442 aa1.26□□□□□ -2.21
SWI4YER111C ERG7P38604 731 aa1.26□□□□□ -2.21
SWI4YER111C SPC97P38863 823 aa1.26□□□□□ -2.21
SWI4YER111C PES4P39684 611 aa1.26□□□□□ -2.21
SWI4YER111C MEP1P40260 492 aa1.26□□□□□ -2.21
SWI4YER111C AZF1P41696 914 aa1.26□□□□□ -2.21
SWI4YER111C QRI1P43123 477 aaKnown RBP1.26□□□□□ -2.21
SWI4YER111C ALT2P52892 507 aa1.26□□□□□ -2.21
SWI4YER111C PKP2P53170 491 aa1.26□□□□□ -2.21
SWI4YER111C SMA1Q02651 245 aa1.26□□□□□ -2.21
SWI4YER111C YMR111CQ04461 462 aaPredicted RBP1.26□□□□□ -2.21
SWI4YER111C PFK27Q12471 397 aaPredicted RBP1.26□□□□□ -2.21
SWI4YER111C STE3P06783 470 aa1.25□□□□□ -2.21
SWI4YER111C DST1P07273 309 aa1.25□□□□□ -2.21
SWI4YER111C ARO3P14843 370 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C TPM1P17536 199 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C EXO70P19658 623 aa1.25□□□□□ -2.21
SWI4YER111C PPZ1P26570 692 aa1.25□□□□□ -2.21
SWI4YER111C ATP11P32453 318 aa1.25□□□□□ -2.21
SWI4YER111C CYS4P32582 507 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C OLA1P38219 394 aaKnown RBP1.25□□□□□ -2.21
SWI4YER111C VHS2P40463 436 aa1.25□□□□□ -2.21
SWI4YER111C SYG1P40528 902 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms