RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SPO7P18410 259 aa3.03□□□□□ -1.92
VAB2YEL005C RHB1P25378 209 aa3.03□□□□□ -1.92
VAB2YEL005C YCR022CP25620 114 aa3.03□□□□□ -1.92
VAB2YEL005C ECM25P32525 599 aa3.03□□□□□ -1.92
VAB2YEL005C VMA8P32610 256 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C CCT4P39078 528 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C YMR147WP40218 223 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C MKT1P40850 830 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C VMA13P41807 478 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C ZIM17P42844 174 aa3.03□□□□□ -1.92
VAB2YEL005C YDL186WP48568 277 aa3.03□□□□□ -1.92
VAB2YEL005C AVT4P50944 713 aa3.03□□□□□ -1.92
VAB2YEL005C AIM32Q04689 311 aa3.03□□□□□ -1.92
VAB2YEL005C DIS3Q08162 1001 aaKnown RBP3.03□□□□□ -1.92
VAB2YEL005C CTF3Q12748 733 aa3.03□□□□□ -1.92
VAB2YEL005C ARG4P04076 463 aaPredicted RBP3.02□□□□□ -1.93
VAB2YEL005C HEM2P05373 342 aa3.02□□□□□ -1.93
VAB2YEL005C PHO2P07269 559 aa3.02□□□□□ -1.93
VAB2YEL005C HOM3P10869 527 aa3.02□□□□□ -1.93
VAB2YEL005C CLN1P20437 546 aa3.02□□□□□ -1.93
VAB2YEL005C KRE2P27809 442 aa3.02□□□□□ -1.93
VAB2YEL005C ATS1P31386 333 aa3.02□□□□□ -1.93
VAB2YEL005C AGA1P32323 725 aa3.02□□□□□ -1.93
VAB2YEL005C HIR2P32480 875 aa3.02□□□□□ -1.93
VAB2YEL005C GLC7P32598 312 aaKnown RBP3.02□□□□□ -1.93
VAB2YEL005C NAT2P37293 288 aa3.02□□□□□ -1.93
VAB2YEL005C DED81P38707 554 aaKnown RBP3.02□□□□□ -1.93
VAB2YEL005C CCT2P39076 527 aaKnown RBP3.02□□□□□ -1.93
VAB2YEL005C LAM5P43560 674 aa3.02□□□□□ -1.93
VAB2YEL005C HMS2P47175 358 aa3.02□□□□□ -1.93
VAB2YEL005C YGR250CP53316 781 aaKnown RBP3.02□□□□□ -1.93
VAB2YEL005C WSC2P53832 503 aa3.02□□□□□ -1.93
VAB2YEL005C IBD2P53892 351 aa3.02□□□□□ -1.93
VAB2YEL005C CIK1Q01649 594 aa3.02□□□□□ -1.93
VAB2YEL005C GIP3Q03016 1276 aa3.02□□□□□ -1.93
VAB2YEL005C RTT103Q05543 409 aa3.02□□□□□ -1.93
VAB2YEL005C DCS1Q06151 350 aa3.02□□□□□ -1.93
VAB2YEL005C SGT1Q08446 395 aa3.02□□□□□ -1.93
VAB2YEL005C ERP4Q12450 207 aa3.02□□□□□ -1.93
VAB2YEL005C YBR298C-AQ8TGK4 73 aa3.02□□□□□ -1.93
VAB2YEL005C SAM1P10659 382 aaKnown RBP3.01□□□□□ -1.93
VAB2YEL005C MDH1P17505 334 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
VAB2YEL005C SAM2P19358 384 aaKnown RBP3.01□□□□□ -1.93
VAB2YEL005C SIN4P32259 974 aa3.01□□□□□ -1.93
VAB2YEL005C MRP4P32902 394 aa3.01□□□□□ -1.93
VAB2YEL005C PIM1P36775 1133 aa3.01□□□□□ -1.93
VAB2YEL005C IDP2P41939 412 aa3.01□□□□□ -1.93
VAB2YEL005C YJR011CP47086 261 aaPredicted RBP3.01□□□□□ -1.93
VAB2YEL005C COS10P52924 374 aa3.01□□□□□ -1.93
VAB2YEL005C TIM18Q08749 192 aa3.01□□□□□ -1.93
VAB2YEL005C YLL056CQ12177 298 aa3.01□□□□□ -1.93
VAB2YEL005C PKH2Q12236 1081 aaKnown RBP3.01□□□□□ -1.93
VAB2YEL005C HIP1P06775 603 aa3□□□□□ -1.93
VAB2YEL005C CPR2P23285 205 aa3□□□□□ -1.93
VAB2YEL005C CPR3P25719 182 aa3□□□□□ -1.93
VAB2YEL005C URA7P28274 579 aaKnown RBP3□□□□□ -1.93
VAB2YEL005C PEX5P35056 612 aa3□□□□□ -1.93
VAB2YEL005C SLM4P38247 162 aa3□□□□□ -1.93
VAB2YEL005C RRT2P38332 387 aa3□□□□□ -1.93
VAB2YEL005C LYS1P38998 373 aaRIP-Chip data3□□□□□ -1.93not detected
VAB2YEL005C SAS2P40963 338 aa3□□□□□ -1.93
VAB2YEL005C WWM1P43582 211 aaKnown RBP3□□□□□ -1.93
VAB2YEL005C TRS85P46944 698 aa3□□□□□ -1.93
VAB2YEL005C FRE4P53746 719 aa3□□□□□ -1.93
VAB2YEL005C ACL4Q03771 387 aa3□□□□□ -1.93
VAB2YEL005C HEL2Q05580 639 aaKnown RBP3□□□□□ -1.93
VAB2YEL005C AEP3Q12089 606 aa3□□□□□ -1.93
VAB2YEL005C YMR230W-AQ3E7B5 62 aa3□□□□□ -1.93
VAB2YEL005C SCEIP03882 235 aa2.99□□□□□ -1.93
VAB2YEL005C SPS22P25380 463 aa2.99□□□□□ -1.93
VAB2YEL005C CDC60P26637 1090 aaKnown RBP2.99□□□□□ -1.93
VAB2YEL005C ERV1P27882 189 aa2.99□□□□□ -1.93
VAB2YEL005C RIB5P38145 238 aa2.99□□□□□ -1.93
VAB2YEL005C RRN10P38204 145 aa2.99□□□□□ -1.93
VAB2YEL005C PCA1P38360 1216 aa2.99□□□□□ -1.93
VAB2YEL005C GCD10P41814 478 aa2.99□□□□□ -1.93
VAB2YEL005C MSO1P53604 210 aaKnown RBP2.99□□□□□ -1.93
VAB2YEL005C GOR1P53839 350 aa2.99□□□□□ -1.93
VAB2YEL005C KTR5P53966 522 aaPredicted RBP2.99□□□□□ -1.93
VAB2YEL005C BET5Q03630 159 aa2.99□□□□□ -1.93
VAB2YEL005C YDR131CQ03899 556 aa2.99□□□□□ -1.93
VAB2YEL005C GYL1Q04322 720 aa2.99□□□□□ -1.93
VAB2YEL005C YTH1Q06102 208 aaPredicted RBP2.99□□□□□ -1.93
VAB2YEL005C DCI1Q08558 271 aa2.99□□□□□ -1.93
VAB2YEL005C YPR022CQ12139 1133 aa2.99□□□□□ -1.93
VAB2YEL005C YLR108CQ12259 485 aa2.99□□□□□ -1.93
VAB2YEL005C RRD2Q12461 358 aa2.99□□□□□ -1.93
VAB2YEL005C MTR10Q99189 972 aa2.99□□□□□ -1.93
VAB2YEL005C TY1B-AO13527 1196 aaKnown RBP2.98□□□□□ -1.93
VAB2YEL005C TEF1P02994 458 aaKnown RBP2.98□□□□□ -1.93
VAB2YEL005C PDE2P06776 526 aa2.98□□□□□ -1.93
VAB2YEL005C PRP16P15938 1071 aaPredicted RBP2.98□□□□□ -1.93
VAB2YEL005C TIP1P27654 210 aaPredicted RBP2.98□□□□□ -1.93
VAB2YEL005C SOR1P35497 357 aaKnown RBP2.98□□□□□ -1.93
VAB2YEL005C YBR056WP38081 501 aa2.98□□□□□ -1.93
VAB2YEL005C MST28P39552 234 aa2.98□□□□□ -1.93
VAB2YEL005C YJL055WP47044 245 aa2.98□□□□□ -1.93
VAB2YEL005C YML6P51998 286 aa2.98□□□□□ -1.93
VAB2YEL005C RSC1P53236 928 aa2.98□□□□□ -1.93
VAB2YEL005C MDG1P53885 366 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms