RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C LOH1P47055 219 aa4.47□□□□□ -1.69
SPR28YDR218C ROG1P53118 685 aa4.47□□□□□ -1.69
SPR28YDR218C MTL1P53214 551 aa4.47□□□□□ -1.69
SPR28YDR218C RTT102P53330 157 aa4.47□□□□□ -1.69
SPR28YDR218C AAT1Q01802 451 aa4.47□□□□□ -1.69
SPR28YDR218C BNA7Q04066 261 aa4.47□□□□□ -1.69
SPR28YDR218C RPC11Q04307 110 aaPredicted RBP4.47□□□□□ -1.69
SPR28YDR218C ARO10Q06408 635 aa4.47□□□□□ -1.69
SPR28YDR218C MRPL35Q06678 367 aa4.47□□□□□ -1.69
SPR28YDR218C GLE1Q12315 538 aa4.47□□□□□ -1.69
SPR28YDR218C CFT1Q06632 1357 aaKnown RBP4.47□□□□□ -1.69
SPR28YDR218C SSK22P25390 1331 aaPredicted RBP4.46□□□□□ -1.69
SPR28YDR218C KGD1P20967 1014 aaKnown RBP4.46□□□□□ -1.7
SPR28YDR218C GAC1P28006 793 aa4.46□□□□□ -1.7
SPR28YDR218C RME1P32338 300 aaKnown RBP4.46□□□□□ -1.7
SPR28YDR218C ATP11P32453 318 aa4.46□□□□□ -1.7
SPR28YDR218C REC114P32841 428 aa4.46□□□□□ -1.7
SPR28YDR218C ASC1P38011 319 aaKnown RBP4.46□□□□□ -1.7
SPR28YDR218C YBR139WP38109 508 aa4.46□□□□□ -1.7
SPR28YDR218C VHC1P38329 1120 aa4.46□□□□□ -1.7
SPR28YDR218C ERG7P38604 731 aa4.46□□□□□ -1.7
SPR28YDR218C ARO9P38840 513 aaPredicted RBP4.46□□□□□ -1.7
SPR28YDR218C CIN4P39110 191 aa4.46□□□□□ -1.7
SPR28YDR218C ELO1P39540 310 aa4.46□□□□□ -1.7
SPR28YDR218C AIM22P47051 409 aa4.46□□□□□ -1.7
SPR28YDR218C YGL185CP53100 379 aa4.46□□□□□ -1.7
SPR28YDR218C YGR117CP53270 476 aa4.46□□□□□ -1.7
SPR28YDR218C COQ6P53318 479 aa4.46□□□□□ -1.7
SPR28YDR218C RET3P53600 189 aa4.46□□□□□ -1.7
SPR28YDR218C KTR6P54070 446 aa4.46□□□□□ -1.7
SPR28YDR218C REX2P54964 269 aaKnown RBP4.46□□□□□ -1.7
SPR28YDR218C SRL4Q03085 281 aa4.46□□□□□ -1.7
SPR28YDR218C PDR8Q06149 701 aa4.46□□□□□ -1.7
SPR28YDR218C MRI1Q06489 411 aaKnown RBP4.46□□□□□ -1.7
SPR28YDR218C CRT10Q08226 957 aa4.46□□□□□ -1.7
SPR28YDR218C YPL216WQ08964 1102 aa4.46□□□□□ -1.7
SPR28YDR218C RRD2Q12461 358 aa4.46□□□□□ -1.7
SPR28YDR218C SFG1Q12507 346 aa4.46□□□□□ -1.7
SPR28YDR218C CMC2Q3E7A4 109 aa4.46□□□□□ -1.7
SPR28YDR218C YOS9Q99220 542 aa4.46□□□□□ -1.7
SPR28YDR218C COX1P00401 534 aa4.45□□□□□ -1.7
SPR28YDR218C ARG80P07249 177 aa4.45□□□□□ -1.7
SPR28YDR218C MAS1P10507 462 aa4.45□□□□□ -1.7
SPR28YDR218C ALG1P16661 449 aa4.45□□□□□ -1.7
SPR28YDR218C MRPL7P36519 292 aa4.45□□□□□ -1.7
SPR28YDR218C MAL32P38158 584 aa4.45□□□□□ -1.7
SPR28YDR218C HRB1P38922 454 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SPR28YDR218C OTU1P43558 301 aa4.45□□□□□ -1.7
SPR28YDR218C RIB4P50861 169 aaPredicted RBP4.45□□□□□ -1.7
SPR28YDR218C DRN1P53255 507 aaKnown RBP4.45□□□□□ -1.7
SPR28YDR218C MAL12P53341 584 aa4.45□□□□□ -1.7
SPR28YDR218C DBP6P53734 629 aaKnown RBP4.45□□□□□ -1.7
SPR28YDR218C YNL260CP53846 198 aa4.45□□□□□ -1.7
SPR28YDR218C DSL1P53847 754 aa4.45□□□□□ -1.7
SPR28YDR218C ESBP6P53918 673 aa4.45□□□□□ -1.7
SPR28YDR218C APM1Q00776 475 aaPredicted RBP4.45□□□□□ -1.7
SPR28YDR218C RSN1Q03516 953 aa4.45□□□□□ -1.7
SPR28YDR218C COQ11Q05892 277 aa4.45□□□□□ -1.7
SPR28YDR218C IPK1Q06667 281 aa4.45□□□□□ -1.7
SPR28YDR218C PEX27Q08580 376 aa4.45□□□□□ -1.7
SPR28YDR218C FMP16Q12497 93 aa4.45□□□□□ -1.7
SPR28YDR218C YNL162W-AQ3E7A8 72 aa4.45□□□□□ -1.7
SPR28YDR218C AI5_ALPHAQ9ZZX1 630 aa4.45□□□□□ -1.7
SPR28YDR218C RTC1Q08281 1341 aa4.45□□□□□ -1.7
SPR28YDR218C RAV1P47104 1357 aa4.44□□□□□ -1.7
SPR28YDR218C KGD2P19262 463 aaPredicted RBP4.44□□□□□ -1.7
SPR28YDR218C DAL81P21657 970 aa4.44□□□□□ -1.7
SPR28YDR218C SEC62P21825 274 aa4.44□□□□□ -1.7
SPR28YDR218C MEK1P24719 497 aaPredicted RBP4.44□□□□□ -1.7
SPR28YDR218C LAC1P28496 418 aa4.44□□□□□ -1.7
SPR28YDR218C PRR1P28708 518 aa4.44□□□□□ -1.7
SPR28YDR218C ARO4P32449 370 aaKnown RBP4.44□□□□□ -1.7
SPR28YDR218C SKG6P32900 734 aaPredicted RBP4.44□□□□□ -1.7
SPR28YDR218C RPC25P35718 212 aa4.44□□□□□ -1.7
SPR28YDR218C HES1P35843 434 aa4.44□□□□□ -1.7
SPR28YDR218C KDX1P36005 433 aa4.44□□□□□ -1.7
SPR28YDR218C SNU114P36048 1008 aaKnown RBP4.44□□□□□ -1.7
SPR28YDR218C YKL023WP36103 277 aaKnown RBP4.44□□□□□ -1.7
SPR28YDR218C IMD2P38697 523 aaKnown RBP4.44□□□□□ -1.7
SPR28YDR218C FMO1P38866 432 aa4.44□□□□□ -1.7
SPR28YDR218C PCF11P39081 626 aaPredicted RBP4.44□□□□□ -1.7
SPR28YDR218C ECM10P39987 644 aa4.44□□□□□ -1.7
SPR28YDR218C SCC4P40090 624 aa4.44□□□□□ -1.7
SPR28YDR218C TOS3P43637 560 aa4.44□□□□□ -1.7
SPR28YDR218C MPS3P47069 682 aa4.44□□□□□ -1.7
SPR28YDR218C MSY1P48527 492 aa4.44□□□□□ -1.7
SPR28YDR218C YGL108CP53139 140 aa4.44□□□□□ -1.7
SPR28YDR218C TIM21P53220 239 aa4.44□□□□□ -1.7
SPR28YDR218C FHN1P53279 174 aa4.44□□□□□ -1.7
SPR28YDR218C YMR160WQ03823 816 aa4.44□□□□□ -1.7
SPR28YDR218C STE23Q06010 1027 aa4.44□□□□□ -1.7
SPR28YDR218C TEN1Q07921 160 aa4.44□□□□□ -1.7
SPR28YDR218C TGS1Q12052 315 aa4.44□□□□□ -1.7
SPR28YDR218C RAP1P11938 827 aa4.43□□□□□ -1.7
SPR28YDR218C ABF1P14164 731 aa4.43□□□□□ -1.7
SPR28YDR218C KRE2P27809 442 aa4.43□□□□□ -1.7
SPR28YDR218C PSO2P30620 661 aa4.43□□□□□ -1.7
SPR28YDR218C CDC5P32562 705 aa4.43□□□□□ -1.7
SPR28YDR218C NUP133P36161 1157 aa4.43□□□□□ -1.7
SPR28YDR218C RPL32P38061 130 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms