RNA–Protein interactions for RNA: YDR025W

RPS11A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11A, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11A	YDR025W	RPN9	Q04062	393 aa	Known RBP	4.18	□□□□□ -1.74
RPS11A	YDR025W	ECM22	Q05958	814 aa	Predicted RBP	4.18	□□□□□ -1.74
RPS11A	YDR025W	SKG3	Q06315	1026 aa		4.18	□□□□□ -1.74
RPS11A	YDR025W	DTD1	Q07648	150 aa	Known RBP	4.18	□□□□□ -1.74
RPS11A	YDR025W	MLH2	Q07980	695 aa		4.18	□□□□□ -1.74
RPS11A	YDR025W	TCO89	Q08921	799 aa		4.18	□□□□□ -1.74
RPS11A	YDR025W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RPS11A	YDR025W	YPL216W	Q08964	1102 aa		4.18	□□□□□ -1.74
RPS11A	YDR025W	SNU23	Q12368	194 aa	Predicted RBP	4.18	□□□□□ -1.74
RPS11A	YDR025W	YLR278C	Q05854	1341 aa		4.18	□□□□□ -1.74
RPS11A	YDR025W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.18	□□□□□ -1.74
RPS11A	YDR025W	RAP1	P11938	827 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	ATR1	P13090	542 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	SPB1	P25582	841 aa	Predicted RBP	4.17	□□□□□ -1.74
RPS11A	YDR025W	KRE2	P27809	442 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	THI80	P35202	319 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	HES1	P35843	434 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	MYO3	P36006	1272 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	STB6	P36085	766 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPS11A	YDR025W	SMC2	P38989	1170 aa	Known RBP	4.17	□□□□□ -1.74
RPS11A	YDR025W	JLP2	P40206	208 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	YJL068C	P40363	299 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPS11A	YDR025W	ELP2	P42935	788 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	BIR1	P47134	954 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	BPL1	P48445	690 aa	Predicted RBP	4.17	□□□□□ -1.74
RPS11A	YDR025W	MSY1	P48527	492 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	NAS6	P50086	228 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	MIG2	P53035	382 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	TAF6	P53040	516 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	CRN1	Q06440	651 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	YDL242W	Q07746	117 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	YLR040C	Q07988	224 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	VPS54	Q12071	889 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	YPR022C	Q12139	1133 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	YPT6	Q99260	215 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	RAD61	Q99359	647 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	Q0010	Q9ZZX9	128 aa		4.17	□□□□□ -1.74
RPS11A	YDR025W	SEC7	P11075	2009 aa	Known RBP	4.17	□□□□□ -1.74
RPS11A	YDR025W	COX1	P00401	534 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	AAC1	P04710	309 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	CHO2	P05374	869 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	RPL6B	P05739	176 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	HRR25	P29295	494 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	ZIP1	P31111	875 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	VPH1	P32563	840 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	YBL010C	P32788	280 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	UTP30	P36144	274 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	MAK5	P38112	773 aa	Predicted RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	REG2	P38232	338 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	RFS1	P38234	210 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	SLM4	P38247	162 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	RCY1	P39531	840 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	RMR1	P53060	241 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	USE1	P53146	245 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	GOR1	P53839	350 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	SED5	Q01590	340 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	MAK10	Q02197	733 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	UBP16	Q02863	499 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	RMT2	Q03305	412 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	ATG38	Q05789	226 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	ECI1	Q05871	280 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	YLL007C	Q07799	665 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	SPE3	Q12074	293 aa	Known RBP	4.16	□□□□□ -1.74
RPS11A	YDR025W	NTO1	Q12311	748 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	YBR298C-A	Q8TGK4	73 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	AI5_ALPHA	Q9ZZX1	630 aa		4.16	□□□□□ -1.74
RPS11A	YDR025W	MF(ALPHA)1	P01149	165 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RPS11A	YDR025W	STE12	P13574	688 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	RVS161	P25343	265 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	RPS5	P26783	225 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	GPI10	P30777	616 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	NTR2	P36118	322 aa	Predicted RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	KAP104	P38217	918 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	VID24	P38263	362 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	TIF5	P38431	405 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	RCK2	P38623	610 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	DIA4	P38705	446 aa	Predicted RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	VMA7	P39111	118 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	RTT105	P40063	208 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	YGR210C	P42942	411 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	VMA10	P48836	114 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	NUP84	P52891	726 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	CUE3	P53137	624 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	SGF73	P53165	657 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	YGR066C	P53242	292 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	EBS1	Q03466	884 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	YML037C	Q03703	340 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	TRS23	Q03784	219 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	RPC11	Q04307	110 aa	Predicted RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	DBP9	Q06218	594 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	IRC3	Q06683	689 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	AIM39	Q08223	395 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	RAX1	Q08760	435 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	THP3	Q12049	470 aa	Known RBP	4.15	□□□□□ -1.75
RPS11A	YDR025W	TGS1	Q12052	315 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	ISA2	Q12425	185 aa		4.15	□□□□□ -1.75
RPS11A	YDR025W	RRP36	Q12481	300 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms