RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB3, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB3	YBR278W	APE2	P32454	952 aa	Known RBP	3.11	□□□□□ -1.91
DPB3	YBR278W	NIP1	P32497	812 aa	Known RBP	3.11	□□□□□ -1.91
DPB3	YBR278W	ECM25	P32525	599 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	TOA1	P32773	286 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	ASK1	P35734	292 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	LAS1	P36146	502 aa	Predicted RBP	3.11	□□□□□ -1.91
DPB3	YBR278W	RRN10	P38204	145 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	YSW1	P38280	609 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	PCA1	P38360	1216 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	RRP3	P38712	501 aa	Known RBP	3.11	□□□□□ -1.91
DPB3	YBR278W	YIL152W	P40455	235 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	MEH1	Q02205	184 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	YDR415C	Q04033	374 aa	Predicted RBP	3.11	□□□□□ -1.91
DPB3	YBR278W	NRT1	Q08485	598 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	UBX3	Q12229	455 aa		3.11	□□□□□ -1.91
DPB3	YBR278W	HIS4	P00815	799 aa	Known RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	PDE2	P06776	526 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	VMA2	P16140	517 aa	Known RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	EXO70	P19658	623 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	HNM1	P19807	563 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	PTP1	P25044	335 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	YNK1	P36010	153 aa	Known RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	UIP5	P36137	443 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	DAD2	P36162	133 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	OLA1	P38219	394 aa	Known RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	SIF2	P38262	535 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	GDT1	P38301	280 aa	Predicted RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	RRP4	P38792	359 aa	Known RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	WSS1	P38838	269 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	SPC97	P38863	823 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	YIR014W	P40570	242 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	TRS85	P46944	698 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	PHO86	P46956	311 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	SEC5	P89102	971 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	PPM1	Q04081	328 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	YDR387C	Q04162	555 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	YMR034C	Q05131	434 aa	Predicted RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	MRPL51	Q06090	140 aa	Predicted RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	NDL1	Q06568	189 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	YDL009C	Q12210	107 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	CSR2	Q12734	1121 aa		3.1	□□□□□ -1.91
DPB3	YBR278W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.1	□□□□□ -1.91
DPB3	YBR278W	RPL6B	P05739	176 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	GLN3	P18494	730 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	SMY1	P32364	656 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	SPC110	P32380	944 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	ATO2	P32907	282 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	YCR041W	P37265	110 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	PFF1	P38244	976 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	PCP1	P53259	346 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	SCW4	P53334	386 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	YIF1	P53845	314 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	RPL6A	Q02326	176 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	GIP3	Q03016	1276 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	YDR541C	Q03049	344 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	RLI1	Q03195	608 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	TAF12	Q03761	539 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	RPN9	Q04062	393 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	YDR341C	Q05506	607 aa	Known RBP	3.09	□□□□□ -1.91
DPB3	YBR278W	SYO1	Q07395	620 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	YEH2	Q07950	538 aa		3.09	□□□□□ -1.91
DPB3	YBR278W	DAP2	P18962	818 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	RIM1	P32445	135 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	SMI1	P32566	505 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	YEL043W	P32618	956 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	RPS0A	P32905	252 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	SIP2	P34164	415 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	MRPL4	P36517	319 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	ARC40	P38328	384 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	GPI16	P38875	610 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	STN1	P38960	494 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	POP2	P39008	433 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	YAL037W	P39728	267 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	ISC1	P40015	477 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	GAT2	P40209	560 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	CHS6	P40955	746 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	ELP2	P42935	788 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	EPL1	P43572	832 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	GWT1	P47026	490 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	YIP1	P53039	248 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	IRC15	Q02733	499 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	DIG1	Q03063	452 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	YLR281C	Q05863	155 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	DBP9	Q06218	594 aa	Known RBP	3.08	□□□□□ -1.92
DPB3	YBR278W	VPS74	Q06385	345 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	RUP1	Q12242	671 aa		3.08	□□□□□ -1.92
DPB3	YBR278W	IMA3	P0CW40	589 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	IMA4	P0CW41	589 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	ALG1	P16661	449 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	TRX1	P22217	103 aa	Known RBP	3.07	□□□□□ -1.92
DPB3	YBR278W	CTR86	P25355	563 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	PHO91	P27514	894 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	HSP104	P31539	908 aa	Known RBP	3.07	□□□□□ -1.92
DPB3	YBR278W	FRE2	P36033	711 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	PCF11	P39081	626 aa	Predicted RBP	3.07	□□□□□ -1.92
DPB3	YBR278W	MDE1	P47095	244 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	ROG1	P53118	685 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	PDR16	P53860	351 aa	Known RBP	3.07	□□□□□ -1.92
DPB3	YBR278W	GPI15	P53961	229 aa		3.07	□□□□□ -1.92
DPB3	YBR278W	PNG1	Q02890	363 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms