RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	VTC2	P43585	828 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	PCP1	P53259	346 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	KTR5	P53966	522 aa	Predicted RBP	4.04	□□□□□ -1.76
UBS1	YBR165W	HSP31	Q04432	237 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	BSC6	Q08280	497 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	MUM3	Q08750	479 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	TIP1	P27654	210 aa	Predicted RBP	4.03	□□□□□ -1.76
UBS1	YBR165W	IDH2	P28241	369 aa	Known RBP	4.03	□□□□□ -1.76
UBS1	YBR165W	SMF1	P38925	575 aa		4.03	□□□□□ -1.76
UBS1	YBR165W	YGL039W	P53183	348 aa	Known RBP	4.03	□□□□□ -1.76
UBS1	YBR165W	DSL1	P53847	754 aa		4.03	□□□□□ -1.76
UBS1	YBR165W	TMC1	Q08422	150 aa	Predicted RBP	4.03	□□□□□ -1.76
UBS1	YBR165W	ADH2	P00331	348 aa	Known RBP	4.02	□□□□□ -1.77
UBS1	YBR165W	GPH1	P06738	902 aa	Known RBP	4.02	□□□□□ -1.77
UBS1	YBR165W	CDC60	P26637	1090 aa	Known RBP	4.02	□□□□□ -1.77
UBS1	YBR165W	RIB5	P38145	238 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	PRM5	P40476	318 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	YLR152C	P54072	576 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	HXT11	P54862	567 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	YMR181C	Q03231	154 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	YDR387C	Q04162	555 aa		4.02	□□□□□ -1.77
UBS1	YBR165W	PKH2	Q12236	1081 aa	Known RBP	4.02	□□□□□ -1.77
UBS1	YBR165W	RIP1	P08067	215 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	CKA1	P15790	372 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	ITR1	P30605	584 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	PIM1	P36775	1133 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	OTU2	P38747	307 aa	Known RBP	4.01	□□□□□ -1.77
UBS1	YBR165W	LAM5	P43560	674 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	WWM1	P43582	211 aa	Known RBP	4.01	□□□□□ -1.77
UBS1	YBR165W	ECM27	P47144	725 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	HER2	Q03557	464 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	TIM18	Q08749	192 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	YPR022C	Q12139	1133 aa		4.01	□□□□□ -1.77
UBS1	YBR165W	YLR278C	Q05854	1341 aa		4	□□□□□ -1.77
UBS1	YBR165W	HIS4	P00815	799 aa	Known RBP	4	□□□□□ -1.77
UBS1	YBR165W	SEC63	P14906	663 aa		4	□□□□□ -1.77
UBS1	YBR165W	PET123	P17558	318 aa		4	□□□□□ -1.77
UBS1	YBR165W	ROX1	P25042	368 aa		4	□□□□□ -1.77
UBS1	YBR165W	HXT3	P32466	567 aa	Known RBP	4	□□□□□ -1.77
UBS1	YBR165W	YNR048W	P53740	393 aa		4	□□□□□ -1.77
UBS1	YBR165W	MDG1	P53885	366 aa		4	□□□□□ -1.77
UBS1	YBR165W	HRI1	Q05905	244 aa	Known RBP	4	□□□□□ -1.77
UBS1	YBR165W	VTA1	Q06263	330 aa		4	□□□□□ -1.77
UBS1	YBR165W	MTC6	P38849	526 aa		3.99	□□□□□ -1.77
UBS1	YBR165W	PAN6	P40459	309 aa		3.99	□□□□□ -1.77
UBS1	YBR165W	RBD2	Q12270	262 aa		3.99	□□□□□ -1.77
UBS1	YBR165W	MET17	P06106	444 aa		3.98	□□□□□ -1.77
UBS1	YBR165W	APE2	P32454	952 aa	Known RBP	3.98	□□□□□ -1.77
UBS1	YBR165W	RFC3	P38629	340 aa		3.98	□□□□□ -1.77
UBS1	YBR165W	ESL1	P40456	1118 aa		3.98	□□□□□ -1.77
UBS1	YBR165W	SAS2	P40963	338 aa		3.98	□□□□□ -1.77
UBS1	YBR165W	NCA3	P46955	337 aa		3.98	□□□□□ -1.77
UBS1	YBR165W	SYF1	Q04048	859 aa	Predicted RBP	3.98	□□□□□ -1.77
UBS1	YBR165W	PPH22	P23595	377 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	DAL2	P25335	343 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	RVS161	P25343	265 aa	Known RBP	3.97	□□□□□ -1.77
UBS1	YBR165W	YBR137W	P38276	179 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	VHC1	P38329	1120 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	TIS11	P47977	285 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	MTM1	P53320	366 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	FRE4	P53746	719 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	RPA49	Q01080	415 aa	Predicted RBP	3.97	□□□□□ -1.77
UBS1	YBR165W	PPM1	Q04081	328 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	SGT1	Q08446	395 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	BUD21	Q08492	214 aa	Predicted RBP	3.97	□□□□□ -1.77
UBS1	YBR165W	FDH1	Q08911	376 aa		3.97	□□□□□ -1.77
UBS1	YBR165W	ARG4	P04076	463 aa	Predicted RBP	3.96	□□□□□ -1.78
UBS1	YBR165W	RPI1	P23250	407 aa	Known RBP	3.96	□□□□□ -1.78
UBS1	YBR165W	MSG5	P38590	489 aa		3.96	□□□□□ -1.78
UBS1	YBR165W	YHR054C	P38780	354 aa		3.96	□□□□□ -1.78
UBS1	YBR165W	LYS1	P38998	373 aa	RIP-Chip data	3.96	□□□□□ -1.78	not detected
UBS1	YBR165W	YJR011C	P47086	261 aa	Predicted RBP	3.96	□□□□□ -1.78
UBS1	YBR165W	YIF1	P53845	314 aa	Known RBP	3.96	□□□□□ -1.78
UBS1	YBR165W	MRPL19	P53875	158 aa		3.96	□□□□□ -1.78
UBS1	YBR165W	ORT1	Q12375	292 aa		3.96	□□□□□ -1.78
UBS1	YBR165W	RTP1	Q12751	981 aa		3.96	□□□□□ -1.78
UBS1	YBR165W	TEF1	P02994	458 aa	Known RBP	3.95	□□□□□ -1.78
UBS1	YBR165W	TOP1	P04786	769 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	RPS8A	P0CX39	200 aa	Known RBP	3.95	□□□□□ -1.78
UBS1	YBR165W	RPS8B	P0CX40	200 aa	Known RBP	3.95	□□□□□ -1.78
UBS1	YBR165W	SIN4	P32259	974 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	PRS1	P32895	427 aa	Known RBP	3.95	□□□□□ -1.78
UBS1	YBR165W	MNS1	P32906	549 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	DLD2	P46681	530 aa	Known RBP	3.95	□□□□□ -1.78
UBS1	YBR165W	RSN1	Q03516	953 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	TAF11	Q04226	346 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	YMR027W	Q04371	470 aa		3.95	□□□□□ -1.78
UBS1	YBR165W	SOD1	P00445	154 aa	Known RBP	3.94	□□□□□ -1.78
UBS1	YBR165W	RPL3	P14126	387 aa	Known RBP	3.94	□□□□□ -1.78
UBS1	YBR165W	CLC1	P17891	233 aa		3.94	□□□□□ -1.78
UBS1	YBR165W	SLY1	P22213	666 aa		3.94	□□□□□ -1.78
UBS1	YBR165W	LSB5	P25369	354 aa		3.94	□□□□□ -1.78
UBS1	YBR165W	FMS1	P50264	508 aa		3.94	□□□□□ -1.78
UBS1	YBR165W	CWC25	P53854	179 aa	Known RBP	3.94	□□□□□ -1.78
UBS1	YBR165W	WTM1	Q12363	437 aa	Known RBP	3.94	□□□□□ -1.78
UBS1	YBR165W	RMD5	Q12508	421 aa		3.94	□□□□□ -1.78
UBS1	YBR165W	NFT1	P0CE68	1218 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	GEX1	P25596	615 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	HCS1	P34243	683 aa		3.93	□□□□□ -1.78
UBS1	YBR165W	NDE1	P40215	560 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms