RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A YPL199CQ08954 240 aa2.89□□□□□ -1.95
SUS1YBR111W-A HIS4P00815 799 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A SAM1P10659 382 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A SAM2P19358 384 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A SNT1P25357 1226 aa2.88□□□□□ -1.95
SUS1YBR111W-A YCR051WP25631 222 aa2.88□□□□□ -1.95
SUS1YBR111W-A SIN4P32259 974 aa2.88□□□□□ -1.95
SUS1YBR111W-A YME2P32843 850 aa2.88□□□□□ -1.95
SUS1YBR111W-A NAT2P37293 288 aa2.88□□□□□ -1.95
SUS1YBR111W-A NTC20P38302 140 aaPredicted RBP2.88□□□□□ -1.95
SUS1YBR111W-A YIL067CP40514 678 aa2.88□□□□□ -1.95
SUS1YBR111W-A SSU1P41930 458 aa2.88□□□□□ -1.95
SUS1YBR111W-A RPS0BP46654 252 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A YGL138CP53122 345 aa2.88□□□□□ -1.95
SUS1YBR111W-A YIF1P53845 314 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A GIS2P53849 153 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SUS1YBR111W-A MUM3Q08750 479 aa2.88□□□□□ -1.95
SUS1YBR111W-A THP3Q12049 470 aaKnown RBP2.88□□□□□ -1.95
SUS1YBR111W-A VAM3Q12241 283 aa2.88□□□□□ -1.95
SUS1YBR111W-A YER078W-AQ3E7A2 54 aa2.88□□□□□ -1.95
SUS1YBR111W-A ISN1Q99312 450 aa2.88□□□□□ -1.95
SUS1YBR111W-A HEM15P16622 393 aa2.87□□□□□ -1.95
SUS1YBR111W-A SRV2P17555 526 aaKnown RBP2.87□□□□□ -1.95
SUS1YBR111W-A KRE2P27809 442 aa2.87□□□□□ -1.95
SUS1YBR111W-A BEM1P29366 551 aa2.87□□□□□ -1.95
SUS1YBR111W-A STB6P36085 766 aa2.87□□□□□ -1.95
SUS1YBR111W-A RFC3P38629 340 aa2.87□□□□□ -1.95
SUS1YBR111W-A YHR054CP38780 354 aa2.87□□□□□ -1.95
SUS1YBR111W-A YFL067WP43537 175 aa2.87□□□□□ -1.95
SUS1YBR111W-A ECM27P47144 725 aa2.87□□□□□ -1.95
SUS1YBR111W-A COS5P47187 383 aa2.87□□□□□ -1.95
SUS1YBR111W-A BNI5P53890 448 aaKnown RBP2.87□□□□□ -1.95
SUS1YBR111W-A IBD2P53892 351 aa2.87□□□□□ -1.95
SUS1YBR111W-A ROY1Q04847 553 aa2.87□□□□□ -1.95
SUS1YBR111W-A COS7Q07788 383 aa2.87□□□□□ -1.95
SUS1YBR111W-A YPR022CQ12139 1133 aa2.87□□□□□ -1.95
SUS1YBR111W-A AFI1Q99222 893 aa2.87□□□□□ -1.95
SUS1YBR111W-A RHB1P25378 209 aa2.86□□□□□ -1.95
SUS1YBR111W-A RPC53P25441 422 aa2.86□□□□□ -1.95
SUS1YBR111W-A ADK2P26364 225 aa2.86□□□□□ -1.95
SUS1YBR111W-A TIP1P27654 210 aaPredicted RBP2.86□□□□□ -1.95
SUS1YBR111W-A HIR2P32480 875 aa2.86□□□□□ -1.95
SUS1YBR111W-A MPE1P35728 441 aaKnown RBP2.86□□□□□ -1.95
SUS1YBR111W-A MIX23P38162 196 aa2.86□□□□□ -1.95
SUS1YBR111W-A MST28P39552 234 aa2.86□□□□□ -1.95
SUS1YBR111W-A OST1P41543 476 aaKnown RBP2.86□□□□□ -1.95
SUS1YBR111W-A LAM5P43560 674 aa2.86□□□□□ -1.95
SUS1YBR111W-A YPI1P43587 155 aa2.86□□□□□ -1.95
SUS1YBR111W-A SSN8P47821 323 aa2.86□□□□□ -1.95
SUS1YBR111W-A GOR1P53839 350 aa2.86□□□□□ -1.95
SUS1YBR111W-A KAP120Q02932 1032 aa2.86□□□□□ -1.95
SUS1YBR111W-A MDM30Q05930 598 aa2.86□□□□□ -1.95
SUS1YBR111W-A ESA1Q08649 445 aa2.86□□□□□ -1.95
SUS1YBR111W-A RSA1Q08932 381 aa2.86□□□□□ -1.95
SUS1YBR111W-A PKH2Q12236 1081 aaKnown RBP2.86□□□□□ -1.95
SUS1YBR111W-A HSP42Q12329 375 aa2.86□□□□□ -1.95
SUS1YBR111W-A PDX1P16451 410 aa2.85□□□□□ -1.95
SUS1YBR111W-A PIM1P36775 1133 aa2.85□□□□□ -1.95
SUS1YBR111W-A SPG5P42933 373 aa2.85□□□□□ -1.95
SUS1YBR111W-A YJR011CP47086 261 aaPredicted RBP2.85□□□□□ -1.95
SUS1YBR111W-A SKO1Q02100 647 aa2.85□□□□□ -1.95
SUS1YBR111W-A YDR131CQ03899 556 aa2.85□□□□□ -1.95
SUS1YBR111W-A ERB1Q04660 807 aaKnown RBP2.85□□□□□ -1.95
SUS1YBR111W-A DON1Q05610 365 aa2.85□□□□□ -1.95
SUS1YBR111W-A TIM18Q08749 192 aa2.85□□□□□ -1.95
SUS1YBR111W-A RRP12Q12754 1228 aaKnown RBP2.85□□□□□ -1.95
SUS1YBR111W-A CPR4P25334 318 aa2.84□□□□□ -1.95
SUS1YBR111W-A GEX1P25596 615 aa2.84□□□□□ -1.95
SUS1YBR111W-A URA7P28274 579 aaKnown RBP2.84□□□□□ -1.95
SUS1YBR111W-A ITR1P30605 584 aa2.84□□□□□ -1.95
SUS1YBR111W-A SOR1P35497 357 aaKnown RBP2.84□□□□□ -1.95
SUS1YBR111W-A YBR139WP38109 508 aa2.84□□□□□ -1.95
SUS1YBR111W-A RFS1P38234 210 aaKnown RBP2.84□□□□□ -1.95
SUS1YBR111W-A NDT80P38830 627 aa2.84□□□□□ -1.95
SUS1YBR111W-A LYS1P38998 373 aaRIP-Chip data2.84□□□□□ -1.95not detected
SUS1YBR111W-A HMS2P47175 358 aa2.84□□□□□ -1.95
SUS1YBR111W-A FRE4P53746 719 aa2.84□□□□□ -1.95
SUS1YBR111W-A RMT2Q03305 412 aa2.84□□□□□ -1.95
SUS1YBR111W-A PBA1Q05778 276 aa2.84□□□□□ -1.95
SUS1YBR111W-A SOR2Q07786 357 aa2.84□□□□□ -1.95
SUS1YBR111W-A REX4Q08237 289 aa2.84□□□□□ -1.95
SUS1YBR111W-A SGT1Q08446 395 aa2.84□□□□□ -1.95
SUS1YBR111W-A YOR387CQ08910 206 aa2.84□□□□□ -1.95
SUS1YBR111W-A RKM1Q08961 583 aaPredicted RBP2.84□□□□□ -1.95
SUS1YBR111W-A YLR108CQ12259 485 aa2.84□□□□□ -1.95
SUS1YBR111W-A RAD61Q99359 647 aa2.84□□□□□ -1.95
SUS1YBR111W-A SCEIP03882 235 aa2.83□□□□□ -1.96
SUS1YBR111W-A ARG4P04076 463 aaPredicted RBP2.83□□□□□ -1.96
SUS1YBR111W-A ILV5P06168 395 aaKnown RBP2.83□□□□□ -1.96
SUS1YBR111W-A SPT15P13393 240 aaKnown RBP2.83□□□□□ -1.96
SUS1YBR111W-A URA4P20051 364 aa2.83□□□□□ -1.96
SUS1YBR111W-A CLB1P24868 471 aa2.83□□□□□ -1.96
SUS1YBR111W-A SPS22P25380 463 aa2.83□□□□□ -1.96
SUS1YBR111W-A DEG1P31115 442 aaKnown RBP2.83□□□□□ -1.96
SUS1YBR111W-A TFB1P32776 642 aa2.83□□□□□ -1.96
SUS1YBR111W-A YOX1P34161 385 aa2.83□□□□□ -1.96
SUS1YBR111W-A YBL059WP34224 193 aa2.83□□□□□ -1.96
SUS1YBR111W-A RIB5P38145 238 aa2.83□□□□□ -1.96
SUS1YBR111W-A MMS4P38257 691 aa2.83□□□□□ -1.96
SUS1YBR111W-A WWM1P43582 211 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms