RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SESTD1Q86VW0 696 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 CMTR1Q8N1G2 835 aaKnown RBP19.94■□□□□ 0.78
SGMS1-204ENST00000492601 C7orf31Q8N865 590 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 TMEM87BQ96K49 555 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 SPATA33Q96N06 139 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 FTOQ9C0B1 505 aaKnown RBP eCLIP19.94■□□□□ 0.78
SGMS1-204ENST00000492601 PRDM12Q9H4Q4 367 aa19.94■□□□□ 0.78
SGMS1-204ENST00000492601 MYOGP15173 224 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 UBA1P22314 1058 aaKnown RBP19.93■□□□□ 0.78
SGMS1-204ENST00000492601 RFC2P35250 354 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 NECTIN1Q15223 517 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 KIAA0753Q2KHM9 967 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 HSDL1Q3SXM5 330 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 BMP2KLQ5H9B9 411 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 CENPQQ7L2Z9 268 aaPredicted RBP19.93■□□□□ 0.78
SGMS1-204ENST00000492601 MTA3Q9BTC8 594 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 KATNAL1Q9BW62 490 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 SEC63Q9UGP8 760 aaKnown RBP19.93■□□□□ 0.78
SGMS1-204ENST00000492601 GTF2IRD1Q9UHL9 959 aa19.93■□□□□ 0.78
SGMS1-204ENST00000492601 F2P00734 622 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 ACTN1P12814 892 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 ATP2A2P16615 1042 aaKnown RBP19.92■□□□□ 0.78
SGMS1-204ENST00000492601 MRPS9P82933 396 aaKnown RBP19.92■□□□□ 0.78
SGMS1-204ENST00000492601 USP17L6PQ6QN14 398 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 TMTC2Q8N394 836 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
SGMS1-204ENST00000492601 CCDC155Q8N6L0 562 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 DHX38Q92620 1227 aaKnown RBP19.92■□□□□ 0.78
SGMS1-204ENST00000492601 GAS2L1Q99501 681 aaPredicted RBP19.92■□□□□ 0.78
SGMS1-204ENST00000492601 LZTS2Q9BRK4 669 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 BCAS3Q9H6U6 928 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 MLXIPQ9HAP2 919 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 SLC28A3Q9HAS3 691 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 RTEL1Q9NZ71 1219 aa19.92■□□□□ 0.78
SGMS1-204ENST00000492601 HAS3O00219 553 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 PPFIA4O75335 1185 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 TGFB3P10600 412 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 HOXD8P13378 290 aaPredicted RBP19.91■□□□□ 0.78
SGMS1-204ENST00000492601 SMARCA1P28370 1054 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 GNAQP50148 359 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 USP38Q8NB14 1042 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 CAGE1Q8TC20 777 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 CUL5Q93034 780 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 FRMPD4Q14CM0 1322 aa19.91■□□□□ 0.78
SGMS1-204ENST00000492601 TRANK1O15050 2925 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 hCG_1642624A0A1W2PR95 340 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 LIFRP42702 1097 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 ZNF200P98182 395 aaPredicted RBP19.9■□□□□ 0.78
SGMS1-204ENST00000492601 GNPTABQ3T906 1256 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 CCDC82Q8N4S0 544 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 AFAP1L1Q8TED9 768 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 PPM1EQ8WY54 764 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 COL25A1Q9BXS0 654 aaPredicted RBP19.9■□□□□ 0.78
SGMS1-204ENST00000492601 PCDHA11Q9Y5I1 949 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
SGMS1-204ENST00000492601 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 CALM1P0DP23 149 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 CALM2P0DP24 149 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 CALM3P0DP25 149 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 SELPP16109 830 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 PRRC2BQ5JSZ5 2229 aaKnown RBP19.89■□□□□ 0.77
SGMS1-204ENST00000492601 PPP2R2DQ66LE6 453 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 LRRC8DQ7L1W4 858 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 MICU3Q86XE3 530 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 TTC28Q96AY4 2481 aa19.89■□□□□ 0.77
SGMS1-204ENST00000492601 REV3LO60673 3130 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 MEIS2O14770 477 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 CKBP12277 381 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 SEMA3FQ13275 785 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 ADGRE1Q14246 886 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 RNF20Q5VTR2 975 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 CYFIP1Q7L576 1253 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 FANCBQ8NB91 859 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 WNT8BQ93098 351 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 INPP4AQ96PE3 977 aaPredicted RBP19.88■□□□□ 0.77
SGMS1-204ENST00000492601 C16orf70Q9BSU1 422 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 MICAL3Q7RTP6 2002 aa19.88■□□□□ 0.77
SGMS1-204ENST00000492601 SPATA31C2B4DYI2 1134 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 PIK3CDO00329 1044 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 NOP56O00567 594 aaKnown RBP19.87■□□□□ 0.77
SGMS1-204ENST00000492601 STAM2O75886 525 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 LGALS2P05162 132 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 IGFBP4P22692 258 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 ICAM3P32942 547 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 HIC1Q14526 733 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 GPNMBQ14956 572 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 PCNX4Q63HM2 1172 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 TCEANC2Q96MN5 208 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 SLC9A7Q96T83 725 aa19.87■□□□□ 0.77
SGMS1-204ENST00000492601 H3BRB1 525 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 FIBPO43427 364 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 CA3P07451 260 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 RBL2Q08999 1139 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 PTK7Q13308 1070 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 NEDD9Q14511 834 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 UBE2SQ16763 222 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 TMTC3Q6ZXV5 915 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 NEK1Q96PY6 1258 aa19.86■□□□□ 0.77
SGMS1-204ENST00000492601 TUT1Q9H6E5 874 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms