RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	RHO2	P06781	192 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	COR1	P07256	457 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	NAR1	P23503	491 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	ERG9	P29704	444 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	MSN2	P33748	704 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	TIP20	P33891	701 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	LRG1	P35688	1017 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SBE22	P38814	852 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	UBA4	P38820	440 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	FAA2	P39518	744 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	CIN1	P40987	1014 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SWP82	P43554	623 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	YGR035C	P53222	116 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	TRM82	Q03774	444 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	TRM12	Q04235	462 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	URC2	Q04411	772 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	TDA9	Q04545	1251 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	PEX11	Q12462	236 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	RMD5	Q12508	421 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SAC7	P17121	654 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	ISY1	P21374	235 aa	Predicted RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	YCR051W	P25631	222 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	LYP1	P32487	611 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	BAT1	P38891	393 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	NOP16	P40007	231 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	DSE1	P40077	573 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	SPP2	Q02521	185 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	NUP53	Q03790	475 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	RAD30	Q04049	632 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YOL075C	Q08234	1294 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	CUE5	Q08412	411 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	HNT3	Q08702	217 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	UIP4	Q08926	304 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	RCN2	Q12044	265 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	OLE1	P21147	510 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	SAT4	P25333	603 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	CWP1	P28319	239 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	TOD6	P34219	525 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YBR053C	P38235	358 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	COS8	P38723	381 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	DUN1	P39009	513 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	AAD14	P42884	376 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	FMP33	P46998	180 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	EMI2	Q04409	500 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	PRP11	Q07350	266 aa	Predicted RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	VPS54	Q12071	889 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	PEP4	P07267	405 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	RNA14	P25298	677 aa	Known RBP	4.91	□□□□□ -1.62
GDB1	YPR184W	PRO1	P32264	428 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	BEM3	P32873	1128 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	RRN10	P38204	145 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	RTS3	P53289	263 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	MRPL50	P53724	139 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YNR068C	P53754	272 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YNL095C	P53932	642 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YML053C	Q04978	212 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	ARP9	Q05123	467 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	GUP2	Q08929	609 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YLR049C	Q12110	428 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	YOR019W	Q99248	730 aa		4.91	□□□□□ -1.62
GDB1	YPR184W	MRPL8	P22353	238 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	YUR1	P26725	428 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
GDB1	YPR184W	YJR149W	P47177	404 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	PXR1	P53335	271 aa	Predicted RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	TRM112	P53738	135 aa	Predicted RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	NIS1	P53939	407 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	YML131W	Q03102	365 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	YMR099C	Q03161	297 aa	Known RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	YMR209C	Q03648	457 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	DYN3	Q04949	312 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	YDL057W	Q07379	328 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	DIA2	Q08496	732 aa	Predicted RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	ACM1	Q08981	209 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	SIR3	P06701	978 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	GDA1	P32621	518 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	ALG3	P38179	458 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	SIC1	P38634	284 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	GND1	P38720	489 aa	Known RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	EFM4	P40516	257 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	GNA1	P43577	159 aa	Predicted RBP	4.9	□□□□□ -1.62
GDB1	YPR184W	MDV1	P47025	714 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	ATP25	Q03153	612 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	YPQ2	Q06328	317 aa		4.9	□□□□□ -1.62
GDB1	YPR184W	MET8	P15807	274 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	PET130	P47065	347 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	ARI1	P53111	347 aa	Known RBP	4.9	□□□□□ -1.63
GDB1	YPR184W	YGR066C	P53242	292 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	KAP120	Q02932	1032 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	VPS74	Q06385	345 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	CDD1	Q06549	142 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	MDM36	Q06820	579 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	PUN1	Q06991	263 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	AVL9	Q12500	764 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	SKS1	Q12505	502 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	RRP12	Q12754	1228 aa	Known RBP	4.9	□□□□□ -1.63
GDB1	YPR184W	GAL4	P04386	881 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	SSA3	P09435	649 aa	Known RBP	4.9	□□□□□ -1.63
GDB1	YPR184W	STE12	P13574	688 aa		4.9	□□□□□ -1.63
GDB1	YPR184W	PDX1	P16451	410 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms