RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	SLP1	Q12232	587 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YOR029W	Q12243	111 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	RGT2	Q12300	763 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	NPC2	Q12408	173 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	PET111	P08468	800 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	RPL1A	P0CX43	217 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	RPL1B	P0CX44	217 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	SAM35	P14693	329 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	IMG1	P25626	169 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	GSY2	P27472	705 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	1.27	□□□□□ -2.21	not detected
CLU1	YMR012W	PRS1	P32895	427 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	ALP1	P38971	573 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	NAS2	P40555	220 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	BIT61	P47041	543 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	MUK1	Q02866	612 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	PPN1	Q04119	674 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	SMA2	Q04658	369 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	DNL4	Q08387	944 aa	Predicted RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	RDR1	Q08904	546 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	ATG29	Q12092	213 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	OM45	P16547	393 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	AMD2	P22580	549 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	KAR4	P25583	335 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YBR062C	P38239	180 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	ECM8	P38246	354 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	MMS4	P38257	691 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	STP2	P38704	541 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	WSC4	P38739	605 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	BNA3	P47039	444 aa	Known RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	PCP1	P53259	346 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YTP1	P53584	459 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YNL144C	P53907	740 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	TIM11	P81449	96 aa	Predicted RBP	1.27	□□□□□ -2.21
CLU1	YMR012W	SWT1	Q12104	458 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	RBD2	Q12270	262 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	YIL046W-A	Q3E7Z4	54 aa		1.27	□□□□□ -2.21
CLU1	YMR012W	TOR2	P32600	2474 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	TEF1	P02994	458 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	TCP1	P12612	559 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	SAG1	P20840	650 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	PHO91	P27514	894 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	BUD14	P27637	709 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	CRM1	P30822	1084 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	MF(ALPHA)2	P32435	120 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	RPN2	P32565	945 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	ERV46	P39727	415 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	HXT14	P42833	540 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	SWP82	P43554	623 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	GCV1	P48015	400 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	ASE1	P50275	885 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	STR3	P53101	465 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	YGR018C	P53211	109 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	YPR003C	P53394	754 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	REX2	P54964	269 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	RPA49	Q01080	415 aa	Predicted RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	RRN5	Q02983	363 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	ADY4	Q05955	493 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	PBP4	Q07362	185 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	POM34	Q12445	299 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	COX3	P00420	269 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	MATALPHA1	P0CY06	175 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	HMLALPHA1	P0CY07	175 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	PRD1	P25375	712 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	MRE11	P32829	692 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	RPC34	P32910	317 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	SLM4	P38247	162 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	SWC5	P38326	303 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	GIP4	P39732	760 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	FAU1	P40099	211 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	BUD17	P53727	317 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	YNL146W	P53906	100 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	RNH1	Q04740	348 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	DCS1	Q06151	350 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	RPN8	Q08723	338 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	YPR1	Q12458	312 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	GCN1	P33892	2672 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	RAD50	P12753	1312 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	SPE2	P21182	396 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	VPS1	P21576	704 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	SPB1	P25582	841 aa	Predicted RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	DPH5	P32469	300 aa	Predicted RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	ARA1	P38115	344 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	PCH2	P38126	564 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	GPI16	P38875	610 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	YER079W	P40052	210 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	YFH7	P43591	353 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	TAX4	P47030	604 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	STB4	P50104	949 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	PIL1	P53252	339 aa	Known RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	PRP3	Q03338	469 aa	Predicted RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	YMR130W	Q04223	302 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	APC5	Q08683	685 aa		1.26	□□□□□ -2.21
CLU1	YMR012W	GPN2	Q08726	347 aa	Predicted RBP	1.26	□□□□□ -2.21
CLU1	YMR012W	HXK2	P04807	486 aa	Known RBP	1.25	□□□□□ -2.21
CLU1	YMR012W	YPS1	P32329	569 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	YME2	P32843	850 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.25	□□□□□ -2.21	not detected
CLU1	YMR012W	HCS1	P34243	683 aa		1.25	□□□□□ -2.21
CLU1	YMR012W	CBT1	P36038	271 aa	Predicted RBP	1.25	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms