RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C SWF1Q04629 336 aa3.32□□□□□ -1.88
RPN13YLR421C STP3Q05937 343 aa3.32□□□□□ -1.88
RPN13YLR421C MRD1Q06106 887 aaKnown RBP3.32□□□□□ -1.88
RPN13YLR421C YLR177WQ06251 628 aa3.32□□□□□ -1.88
RPN13YLR421C SKG3Q06315 1026 aa3.32□□□□□ -1.88
RPN13YLR421C PDH1Q12428 516 aaKnown RBP3.32□□□□□ -1.88
RPN13YLR421C YOR019WQ99248 730 aa3.32□□□□□ -1.88
RPN13YLR421C YBR085C-AO43137 85 aa3.31□□□□□ -1.88
RPN13YLR421C CDC37P06101 506 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C CBP1P07252 654 aa3.31□□□□□ -1.88
RPN13YLR421C VMA2P16140 517 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C CPR2P23285 205 aa3.31□□□□□ -1.88
RPN13YLR421C RRP7P25368 297 aaPredicted RBP3.31□□□□□ -1.88
RPN13YLR421C YCR051WP25631 222 aa3.31□□□□□ -1.88
RPN13YLR421C PEP3P27801 918 aa3.31□□□□□ -1.88
RPN13YLR421C BRF1P29056 596 aa3.31□□□□□ -1.88
RPN13YLR421C MRE11P32829 692 aa3.31□□□□□ -1.88
RPN13YLR421C RAD5P32849 1169 aaPredicted RBP3.31□□□□□ -1.88
RPN13YLR421C UIP5P36137 443 aa3.31□□□□□ -1.88
RPN13YLR421C EFM2P38347 419 aa3.31□□□□□ -1.88
RPN13YLR421C RRF1P38771 230 aa3.31□□□□□ -1.88
RPN13YLR421C SEC24P40482 926 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C SEC28P40509 296 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C MSY1P48527 492 aa3.31□□□□□ -1.88
RPN13YLR421C GPI8P49018 411 aa3.31□□□□□ -1.88
RPN13YLR421C ATP22P50273 684 aaPredicted RBP3.31□□□□□ -1.88
RPN13YLR421C RPA49Q01080 415 aaPredicted RBP3.31□□□□□ -1.88
RPN13YLR421C OAZ1Q02803 292 aa3.31□□□□□ -1.88
RPN13YLR421C PEX25Q02969 394 aa3.31□□□□□ -1.88
RPN13YLR421C YMR254CQ04838 102 aa3.31□□□□□ -1.88
RPN13YLR421C VPS38Q05919 439 aa3.31□□□□□ -1.88
RPN13YLR421C NOP6Q07623 225 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C SMF3Q12078 473 aaPredicted RBP3.31□□□□□ -1.88
RPN13YLR421C PAR32Q12515 295 aaKnown RBP3.31□□□□□ -1.88
RPN13YLR421C SAC3P46674 1301 aa3.3□□□□□ -1.88
RPN13YLR421C PDR18P53756 1333 aa3.3□□□□□ -1.88
RPN13YLR421C TY1B-AO13527 1196 aaKnown RBP3.3□□□□□ -1.88
RPN13YLR421C MDH1P17505 334 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPN13YLR421C HNM1P19807 563 aa3.3□□□□□ -1.88
RPN13YLR421C MNE1P24720 663 aa3.3□□□□□ -1.88
RPN13YLR421C CLB3P24870 427 aa3.3□□□□□ -1.88
RPN13YLR421C POL4P25615 582 aa3.3□□□□□ -1.88
RPN13YLR421C YIH1P25637 258 aa3.3□□□□□ -1.88
RPN13YLR421C SEC1P30619 724 aaKnown RBP3.3□□□□□ -1.88
RPN13YLR421C KAR9P32526 644 aa3.3□□□□□ -1.88
RPN13YLR421C YKT6P36015 200 aaKnown RBP3.3□□□□□ -1.88
RPN13YLR421C YBR139WP38109 508 aa3.3□□□□□ -1.88
RPN13YLR421C REG2P38232 338 aa3.3□□□□□ -1.88
RPN13YLR421C GDI1P39958 451 aaKnown RBP3.3□□□□□ -1.88
RPN13YLR421C SWP82P43554 623 aa3.3□□□□□ -1.88
RPN13YLR421C CTK2P46962 323 aa3.3□□□□□ -1.88
RPN13YLR421C TLG1Q03322 224 aa3.3□□□□□ -1.88
RPN13YLR421C YML037CQ03703 340 aa3.3□□□□□ -1.88
RPN13YLR421C AIM32Q04689 311 aa3.3□□□□□ -1.88
RPN13YLR421C SOV1Q04748 898 aa3.3□□□□□ -1.88
RPN13YLR421C FAR8Q05040 523 aa3.3□□□□□ -1.88
RPN13YLR421C TCO89Q08921 799 aa3.3□□□□□ -1.88
RPN13YLR421C ATG29Q12092 213 aa3.3□□□□□ -1.88
RPN13YLR421C GCD2P12754 651 aaPredicted RBP3.29□□□□□ -1.88
RPN13YLR421C CLN1P20437 546 aa3.29□□□□□ -1.88
RPN13YLR421C CDC10P25342 322 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C RPL5P26321 297 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C MCM4P30665 933 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C RPN2P32565 945 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C LOS1P33418 1100 aaPredicted RBP3.29□□□□□ -1.88
RPN13YLR421C WBP1P33767 430 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C LHS1P36016 881 aa3.29□□□□□ -1.88
RPN13YLR421C NTR2P36118 322 aaPredicted RBP3.29□□□□□ -1.88
RPN13YLR421C ECM4P36156 370 aa3.29□□□□□ -1.88
RPN13YLR421C AGP2P38090 596 aa3.29□□□□□ -1.88
RPN13YLR421C LIN1P38852 340 aaPredicted RBP3.29□□□□□ -1.88
RPN13YLR421C SEC31P38968 1273 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C YIL001WP40560 513 aa3.29□□□□□ -1.88
RPN13YLR421C SGN1P40561 250 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
RPN13YLR421C YRB1P41920 201 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C SSU1P41930 458 aa3.29□□□□□ -1.88
RPN13YLR421C FYV8P46949 817 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C TMA22P47089 198 aaPredicted RBP3.29□□□□□ -1.88
RPN13YLR421C TWF1P53250 332 aa3.29□□□□□ -1.88
RPN13YLR421C CRZ1P53968 678 aa3.29□□□□□ -1.88
RPN13YLR421C ADA2Q02336 434 aa3.29□□□□□ -1.88
RPN13YLR421C PRP42Q03776 544 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C ARX1Q03862 593 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C FIN1Q03898 291 aa3.29□□□□□ -1.88
RPN13YLR421C KRE28Q04431 385 aa3.29□□□□□ -1.88
RPN13YLR421C RRP9Q06506 573 aaKnown RBP3.29□□□□□ -1.88
RPN13YLR421C VAC14Q06708 880 aa3.29□□□□□ -1.88
RPN13YLR421C AVL9Q12500 764 aa3.29□□□□□ -1.88
RPN13YLR421C UTP10P42945 1769 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C RSF2P46974 1380 aa3.28□□□□□ -1.88
RPN13YLR421C MATALPHA2P0CY08 210 aa3.28□□□□□ -1.88
RPN13YLR421C HMLALPHA2P0CY09 210 aa3.28□□□□□ -1.88
RPN13YLR421C MRP2P10663 115 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C TAL1P15019 335 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C RFA2P26754 273 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C POT1P27796 417 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
RPN13YLR421C PAP1P29468 568 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C TIF3P34167 436 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C CMC1P36064 111 aa3.28□□□□□ -1.88
RPN13YLR421C SRL3P36167 246 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms