RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	RBA50	Q04418	439 aa		4.23	□□□□□ -1.73
NIT3	YLR351C	YML133C	Q03099	1374 aa		4.23	□□□□□ -1.73
NIT3	YLR351C	YLL067C	Q07888	1374 aa		4.23	□□□□□ -1.73
NIT3	YLR351C	YLL066C	Q99208	1374 aa		4.23	□□□□□ -1.73
NIT3	YLR351C	YCR007C	P25354	239 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	SEC1	P30619	724 aa	Known RBP	4.22	□□□□□ -1.73
NIT3	YLR351C	NFU1	P32860	256 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	VTC2	P43585	828 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	SLG1	P54867	378 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	SLD5	Q03406	294 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	TAP42	Q04372	366 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	IVY1	Q04934	453 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	RAV1	P47104	1357 aa		4.22	□□□□□ -1.73
NIT3	YLR351C	CLB3	P24870	427 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	BYE1	P36106	594 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	RTT107	P38850	1070 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	YJL070C	P40361	888 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NIT3	YLR351C	YMR155W	Q03795	547 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	YMR087W	Q04299	284 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	BNA5	Q05979	453 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	VTA1	Q06263	330 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	YOL159C-A	Q3E769	90 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	NUP188	P52593	1655 aa	Known RBP	4.21	□□□□□ -1.74
NIT3	YLR351C	DNF3	Q12674	1656 aa		4.21	□□□□□ -1.74
NIT3	YLR351C	GCN2	P15442	1659 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	EXO70	P19658	623 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	PPZ1	P26570	692 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	RAD14	P28519	371 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	MPE1	P35728	441 aa	Known RBP	4.2	□□□□□ -1.74
NIT3	YLR351C	IKS1	P47042	667 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	URB2	P47108	1174 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	YGL108C	P53139	140 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	GPI1	P53306	609 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	RPM2	Q02773	1202 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	RBS1	Q05672	457 aa	Known RBP	4.2	□□□□□ -1.74
NIT3	YLR351C	PHO92	Q06390	306 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	SYO1	Q07395	620 aa		4.2	□□□□□ -1.74
NIT3	YLR351C	LSP1	Q12230	341 aa	Known RBP	4.2	□□□□□ -1.74
NIT3	YLR351C	CAR1	P00812	333 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	RHO2	P06781	192 aa		4.19	□□□□□ -1.74
NIT3	YLR351C	AMD1	P15274	810 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	GLK1	P17709	500 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	SPB1	P25582	841 aa	Predicted RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	SIP2	P34164	415 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	SAS3	P34218	831 aa		4.19	□□□□□ -1.74
NIT3	YLR351C	LSM5	P40089	93 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	GPD2	P41911	440 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	DLD2	P46681	530 aa	Known RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	OCA1	P50946	238 aa	Predicted RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	GIR2	Q03768	265 aa	Predicted RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	MRPL51	Q06090	140 aa	Predicted RBP	4.19	□□□□□ -1.74
NIT3	YLR351C	NRT1	Q08485	598 aa		4.19	□□□□□ -1.74
NIT3	YLR351C	YDL009C	Q12210	107 aa		4.19	□□□□□ -1.74
NIT3	YLR351C	AFG1	P32317	509 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	VPS52	P39904	641 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	YAT2	P40017	923 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	POP1	P41812	875 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	YGR149W	P48236	432 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	VPS74	Q06385	345 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	NDD1	Q08887	554 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	DAP1	Q12091	152 aa		4.18	□□□□□ -1.74
NIT3	YLR351C	CFT2	Q12102	859 aa	Predicted RBP	4.18	□□□□□ -1.74
NIT3	YLR351C	MES1	P00958	751 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	SPS4	P09937	338 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	RPL3	P14126	387 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	BUD14	P27637	709 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	FUN19	P28003	413 aa	Predicted RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	ATP11	P32453	318 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	HXT3	P32466	567 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	FRE1	P32791	686 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	HCS1	P34243	683 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	GCS1	P35197	352 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	RMD9	P53140	646 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	MNP1	P53163	194 aa	Predicted RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	RPA49	Q01080	415 aa	Predicted RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	IRC15	Q02733	499 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	HCR1	Q05775	265 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	KEL3	Q08979	651 aa	Predicted RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.17	□□□□□ -1.74
NIT3	YLR351C	USO1	P25386	1790 aa		4.17	□□□□□ -1.74
NIT3	YLR351C	MRS3	P10566	314 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	REC107	P21651	314 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	GYP6	P32806	458 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	PTR2	P32901	601 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	CBP4	P37267	147 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	KEL1	P38853	1164 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	YMR147W	P40218	223 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	SYG1	P40528	902 aa		4.16	□□□□□ -1.74
NIT3	YLR351C	VMA13	P41807	478 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	YGR250C	P53316	781 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	RLI1	Q03195	608 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	PDR5	P33302	1511 aa	Known RBP	4.16	□□□□□ -1.74
NIT3	YLR351C	YML002W	P0CF17	737 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	MTF1	P14908	341 aa	Known RBP	4.15	□□□□□ -1.75
NIT3	YLR351C	PDX1	P16451	410 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	PPH22	P23595	377 aa		4.15	□□□□□ -1.75
NIT3	YLR351C	IDH2	P28241	369 aa	Known RBP	4.15	□□□□□ -1.75
NIT3	YLR351C	NDC1	P32500	655 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms