RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C MEP2P41948 499 aa2.02□□□□□ -2.09
SGD1YLR336C YFR016CP43597 1233 aaKnown RBP2.02□□□□□ -2.09
SGD1YLR336C GWT1P47026 490 aa2.02□□□□□ -2.09
SGD1YLR336C HEM2P05373 342 aa2.02□□□□□ -2.09
SGD1YLR336C LEU4P06208 619 aaKnown RBP2.02□□□□□ -2.09
SGD1YLR336C HOM3P10869 527 aa2.02□□□□□ -2.09
SGD1YLR336C GEX1P25596 615 aa2.02□□□□□ -2.09
SGD1YLR336C SPC110P32380 944 aa2.02□□□□□ -2.09
SGD1YLR336C FRE2P36033 711 aa2.02□□□□□ -2.09
SGD1YLR336C RPH1P39956 796 aa2.02□□□□□ -2.09
SGD1YLR336C TRS85P46944 698 aa2.02□□□□□ -2.09
SGD1YLR336C MDM30Q05930 598 aa2.02□□□□□ -2.09
SGD1YLR336C YMR230W-AQ3E7B5 62 aa2.02□□□□□ -2.09
SGD1YLR336C YLR278CQ05854 1341 aa2.01□□□□□ -2.09
SGD1YLR336C YML002WP0CF17 737 aa2.01□□□□□ -2.09
SGD1YLR336C MTF1P14908 341 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C CLB1P24868 471 aa2.01□□□□□ -2.09
SGD1YLR336C VMA8P32610 256 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C VHC1P38329 1120 aa2.01□□□□□ -2.09
SGD1YLR336C RFC3P38629 340 aa2.01□□□□□ -2.09
SGD1YLR336C ISC1P40015 477 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C SHO1P40073 367 aa2.01□□□□□ -2.09
SGD1YLR336C RMD9P53140 646 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C KAP120Q02932 1032 aa2.01□□□□□ -2.09
SGD1YLR336C RMT2Q03305 412 aa2.01□□□□□ -2.09
SGD1YLR336C ERP1Q05359 219 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C GPH1P06738 902 aaKnown RBP2.01□□□□□ -2.09
SGD1YLR336C CLC1P17891 233 aa2.01□□□□□ -2.09
SGD1YLR336C EXO70P19658 623 aa2.01□□□□□ -2.09
SGD1YLR336C DBF4P32325 704 aa2.01□□□□□ -2.09
SGD1YLR336C RTT107P38850 1070 aa2.01□□□□□ -2.09
SGD1YLR336C YAT2P40017 923 aa2.01□□□□□ -2.09
SGD1YLR336C URB2P47108 1174 aa2.01□□□□□ -2.09
SGD1YLR336C COS5P47187 383 aa2.01□□□□□ -2.09
SGD1YLR336C TCB2P48231 1178 aa2.01□□□□□ -2.09
SGD1YLR336C COS10P52924 374 aa2.01□□□□□ -2.09
SGD1YLR336C RSC1P53236 928 aa2.01□□□□□ -2.09
SGD1YLR336C YDR387CQ04162 555 aa2.01□□□□□ -2.09
SGD1YLR336C VPS74Q06385 345 aa2.01□□□□□ -2.09
SGD1YLR336C COS7Q07788 383 aa2.01□□□□□ -2.09
SGD1YLR336C TIP41Q12199 356 aa2.01□□□□□ -2.09
SGD1YLR336C VAM3Q12241 283 aa2.01□□□□□ -2.09
SGD1YLR336C SET6Q12529 373 aa2.01□□□□□ -2.09
SGD1YLR336C MCK1P21965 375 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C SIN4P32259 974 aa2□□□□□ -2.09
SGD1YLR336C FMP46P36141 133 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C ARA1P38115 344 aa2□□□□□ -2.09
SGD1YLR336C KRE9P39005 276 aa2□□□□□ -2.09
SGD1YLR336C SAS2P40963 338 aa2□□□□□ -2.09
SGD1YLR336C ZIM17P42844 174 aa2□□□□□ -2.09
SGD1YLR336C FMS1P50264 508 aa2□□□□□ -2.09
SGD1YLR336C SCS3P53012 380 aa2□□□□□ -2.09
SGD1YLR336C YGL138CP53122 345 aa2□□□□□ -2.09
SGD1YLR336C PCP1P53259 346 aa2□□□□□ -2.09
SGD1YLR336C HSP31Q04432 237 aa2□□□□□ -2.09
SGD1YLR336C AIM32Q04689 311 aa2□□□□□ -2.09
SGD1YLR336C DON1Q05610 365 aa2□□□□□ -2.09
SGD1YLR336C RRP45Q05636 305 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C ISA2Q12425 185 aa2□□□□□ -2.09
SGD1YLR336C CTF3Q12748 733 aa2□□□□□ -2.09
SGD1YLR336C SMC6Q12749 1114 aa2□□□□□ -2.09
SGD1YLR336C RPL20AP0CX23 172 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C RPL20BP0CX24 172 aaPredicted RBP2□□□□□ -2.09
SGD1YLR336C REC107P21651 314 aa2□□□□□ -2.09
SGD1YLR336C RNA14P25298 677 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C AGA1P32323 725 aa2□□□□□ -2.09
SGD1YLR336C HIR2P32480 875 aa2□□□□□ -2.09
SGD1YLR336C PMU1P36069 295 aa2□□□□□ -2.09
SGD1YLR336C CBP4P37267 147 aa2□□□□□ -2.09
SGD1YLR336C RRT5P43607 289 aa2□□□□□ -2.09
SGD1YLR336C RPS0BP46654 252 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C AVT4P50944 713 aa2□□□□□ -2.09
SGD1YLR336C YGL260WP53056 76 aa2□□□□□ -2.09
SGD1YLR336C ART5P53244 586 aaKnown RBP2□□□□□ -2.09
SGD1YLR336C NCS2P53923 493 aaPredicted RBP2□□□□□ -2.09
SGD1YLR336C YCR100CP25606 316 aa1.99□□□□□ -2.09
SGD1YLR336C BEM1P29366 551 aa1.99□□□□□ -2.09
SGD1YLR336C GYP6P32806 458 aa1.99□□□□□ -2.09
SGD1YLR336C PIM1P36775 1133 aa1.99□□□□□ -2.09
SGD1YLR336C RRT2P38332 387 aa1.99□□□□□ -2.09
SGD1YLR336C SER3P40054 469 aa1.99□□□□□ -2.09
SGD1YLR336C ELP2P42935 788 aa1.99□□□□□ -2.09
SGD1YLR336C CAK1P43568 368 aaPredicted RBP1.99□□□□□ -2.09
SGD1YLR336C YDL186WP48568 277 aa1.99□□□□□ -2.09
SGD1YLR336C YIF1P53845 314 aaKnown RBP1.99□□□□□ -2.09
SGD1YLR336C CRZ1P53968 678 aa1.99□□□□□ -2.09
SGD1YLR336C GDH1P07262 454 aaKnown RBP1.99□□□□□ -2.09
SGD1YLR336C PRP16P15938 1071 aaPredicted RBP1.99□□□□□ -2.09
SGD1YLR336C RHB1P25378 209 aa1.99□□□□□ -2.09
SGD1YLR336C NDI1P32340 513 aa1.99□□□□□ -2.09
SGD1YLR336C TFB1P32776 642 aa1.99□□□□□ -2.09
SGD1YLR336C NTC20P38302 140 aaPredicted RBP1.99□□□□□ -2.09
SGD1YLR336C MDM31P38880 579 aa1.99□□□□□ -2.09
SGD1YLR336C ALG8P40351 577 aa1.99□□□□□ -2.09
SGD1YLR336C ECM27P47144 725 aa1.99□□□□□ -2.09
SGD1YLR336C SKO1Q02100 647 aa1.99□□□□□ -2.09
SGD1YLR336C PIR3Q03180 325 aa1.99□□□□□ -2.09
SGD1YLR336C ACL4Q03771 387 aa1.99□□□□□ -2.09
SGD1YLR336C MMR1Q06324 491 aa1.99□□□□□ -2.09
SGD1YLR336C RKM1Q08961 583 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms