RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C VID24P38263 362 aa2.57□□□□□ -2
AFB1YLR040C MET18P40469 1032 aa2.57□□□□□ -2
AFB1YLR040C YGL242CP53066 181 aa2.57□□□□□ -2
AFB1YLR040C POP6P53218 158 aa2.57□□□□□ -2
AFB1YLR040C CAF40P53829 373 aa2.57□□□□□ -2
AFB1YLR040C JJJ1P53863 590 aa2.57□□□□□ -2
AFB1YLR040C ELP3Q02908 557 aaKnown RBP2.57□□□□□ -2
AFB1YLR040C ATG29Q12092 213 aa2.57□□□□□ -2
AFB1YLR040C TMS1Q12116 473 aa2.57□□□□□ -2
AFB1YLR040C RRI2Q12348 645 aa2.57□□□□□ -2
AFB1YLR040C MET17P06106 444 aa2.56□□□□□ -2
AFB1YLR040C SPT15P13393 240 aaKnown RBP2.56□□□□□ -2
AFB1YLR040C SPB1P25582 841 aaPredicted RBP2.56□□□□□ -2
AFB1YLR040C GPI10P30777 616 aa2.56□□□□□ -2
AFB1YLR040C DEG1P31115 442 aaKnown RBP2.56□□□□□ -2
AFB1YLR040C AFG1P32317 509 aa2.56□□□□□ -2
AFB1YLR040C YFL067WP43537 175 aa2.56□□□□□ -2
AFB1YLR040C YGR149WP48236 432 aa2.56□□□□□ -2
AFB1YLR040C OGG1P53397 376 aaPredicted RBP2.56□□□□□ -2
AFB1YLR040C ODC1Q03028 310 aa2.56□□□□□ -2
AFB1YLR040C SAM1P10659 382 aaKnown RBP2.55□□□□□ -2
AFB1YLR040C SAM2P19358 384 aaKnown RBP2.55□□□□□ -2
AFB1YLR040C IDH2P28241 369 aaKnown RBP2.55□□□□□ -2
AFB1YLR040C RAD14P28519 371 aa2.55□□□□□ -2
AFB1YLR040C YBL059WP34224 193 aa2.55□□□□□ -2
AFB1YLR040C MRPL4P36517 319 aa2.55□□□□□ -2
AFB1YLR040C NDT80P38830 627 aa2.55□□□□□ -2
AFB1YLR040C HXT14P42833 540 aa2.55□□□□□ -2
AFB1YLR040C SHE10P53075 577 aa2.55□□□□□ -2
AFB1YLR040C PNG1Q02890 363 aa2.55□□□□□ -2
AFB1YLR040C ADD37Q03233 198 aa2.55□□□□□ -2
AFB1YLR040C SOV1Q04748 898 aa2.55□□□□□ -2
AFB1YLR040C PBA1Q05778 276 aa2.55□□□□□ -2
AFB1YLR040C MRPL35Q06678 367 aa2.55□□□□□ -2
AFB1YLR040C RIM20Q12033 661 aa2.55□□□□□ -2
AFB1YLR040C GRX6Q12438 231 aa2.55□□□□□ -2
AFB1YLR040C RRP12Q12754 1228 aaKnown RBP2.55□□□□□ -2
AFB1YLR040C YML133CQ03099 1374 aa2.54□□□□□ -2
AFB1YLR040C YLL067CQ07888 1374 aa2.54□□□□□ -2
AFB1YLR040C YLL066CQ99208 1374 aa2.54□□□□□ -2
AFB1YLR040C RHO2P06781 192 aa2.54□□□□□ -2
AFB1YLR040C YAR066WP0CX18 203 aa2.54□□□□□ -2
AFB1YLR040C YHR214WP0CX19 203 aa2.54□□□□□ -2
AFB1YLR040C CPR4P25334 318 aa2.54□□□□□ -2
AFB1YLR040C YEL045CP32616 141 aa2.54□□□□□ -2
AFB1YLR040C SWD3P38123 315 aa2.54□□□□□ -2
AFB1YLR040C MIX23P38162 196 aa2.54□□□□□ -2
AFB1YLR040C CCT2P39076 527 aaKnown RBP2.54□□□□□ -2
AFB1YLR040C PRE5P40302 234 aaKnown RBP2.54□□□□□ -2
AFB1YLR040C OST1P41543 476 aaKnown RBP2.54□□□□□ -2
AFB1YLR040C TFG2P41896 400 aaPredicted RBP2.54□□□□□ -2
AFB1YLR040C PCP1P53259 346 aa2.54□□□□□ -2
AFB1YLR040C RRN11Q04712 507 aa2.54□□□□□ -2
AFB1YLR040C ESA1Q08649 445 aa2.54□□□□□ -2
AFB1YLR040C YPL199CQ08954 240 aa2.54□□□□□ -2
AFB1YLR040C CKA1P15790 372 aa2.53□□□□□ -2
AFB1YLR040C PPH22P23595 377 aa2.53□□□□□ -2
AFB1YLR040C ITR1P30605 584 aa2.53□□□□□ -2
AFB1YLR040C CRM1P30822 1084 aaKnown RBP2.53□□□□□ -2
AFB1YLR040C PRP21P32524 280 aaPredicted RBP2.53□□□□□ -2
AFB1YLR040C PAD1P33751 242 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
AFB1YLR040C YCR041WP37265 110 aa2.53□□□□□ -2
AFB1YLR040C CBP4P37267 147 aa2.53□□□□□ -2
AFB1YLR040C SMF1P38925 575 aa2.53□□□□□ -2
AFB1YLR040C ARF3P40994 183 aaRIP-Chip data2.53□□□□□ -2 RIP-Chip
AFB1YLR040C IRC6P43615 237 aa2.53□□□□□ -2
AFB1YLR040C TOF1P53840 1238 aa2.53□□□□□ -2
AFB1YLR040C YDR387CQ04162 555 aa2.53□□□□□ -2
AFB1YLR040C RQC1Q05468 723 aaKnown RBP2.53□□□□□ -2
AFB1YLR040C TSR1Q07381 788 aaKnown RBP2.53□□□□□ -2
AFB1YLR040C ADH2P00331 348 aaKnown RBP2.52□□□□□ -2.01
AFB1YLR040C HHF1P02309 103 aaKnown RBP2.52□□□□□ -2.01
AFB1YLR040C MRP7P12687 371 aa2.52□□□□□ -2.01
AFB1YLR040C CLN3P13365 580 aa2.52□□□□□ -2.01
AFB1YLR040C HXT3P32466 567 aaKnown RBP2.52□□□□□ -2.01
AFB1YLR040C NDE1P40215 560 aa2.52□□□□□ -2.01
AFB1YLR040C ESL1P40456 1118 aa2.52□□□□□ -2.01
AFB1YLR040C YGR210CP42942 411 aa2.52□□□□□ -2.01
AFB1YLR040C YIP1P53039 248 aa2.52□□□□□ -2.01
AFB1YLR040C RMD9P53140 646 aaKnown RBP2.52□□□□□ -2.01
AFB1YLR040C BTN2P53286 410 aa2.52□□□□□ -2.01
AFB1YLR040C NCS2P53923 493 aaPredicted RBP2.52□□□□□ -2.01
AFB1YLR040C HXT11P54862 567 aa2.52□□□□□ -2.01
AFB1YLR040C TMC1Q08422 150 aaPredicted RBP2.52□□□□□ -2.01
AFB1YLR040C YLR108CQ12259 485 aa2.52□□□□□ -2.01
AFB1YLR040C YOL159C-AQ3E769 90 aa2.52□□□□□ -2.01
AFB1YLR040C ROX1P25042 368 aa2.51□□□□□ -2.01
AFB1YLR040C GYP6P32806 458 aa2.51□□□□□ -2.01
AFB1YLR040C NIP100P33420 868 aa2.51□□□□□ -2.01
AFB1YLR040C REE1P40893 198 aa2.51□□□□□ -2.01
AFB1YLR040C YIF1P53845 314 aaKnown RBP2.51□□□□□ -2.01
AFB1YLR040C MRPL19P53875 158 aa2.51□□□□□ -2.01
AFB1YLR040C IBD2P53892 351 aa2.51□□□□□ -2.01
AFB1YLR040C HSP31Q04432 237 aa2.51□□□□□ -2.01
AFB1YLR040C HEL2Q05580 639 aaKnown RBP2.51□□□□□ -2.01
AFB1YLR040C RRG7Q08774 242 aaPredicted RBP2.51□□□□□ -2.01
AFB1YLR040C YPR022CQ12139 1133 aa2.51□□□□□ -2.01
AFB1YLR040C HRT3Q12347 344 aa2.51□□□□□ -2.01
AFB1YLR040C RPL3P14126 387 aaKnown RBP2.5□□□□□ -2.01
AFB1YLR040C SEC63P14906 663 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms