RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W SCH9P11792 824 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W GBP2P25555 427 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SDC25YLL016W GAC1P28006 793 aa2.45□□□□□ -2.02
SDC25YLL016W NDI1P32340 513 aa2.45□□□□□ -2.02
SDC25YLL016W SPC110P32380 944 aa2.45□□□□□ -2.02
SDC25YLL016W ECM25P32525 599 aa2.45□□□□□ -2.02
SDC25YLL016W COT1P32798 439 aa2.45□□□□□ -2.02
SDC25YLL016W HES1P35843 434 aa2.45□□□□□ -2.02
SDC25YLL016W KAE1P36132 386 aa2.45□□□□□ -2.02
SDC25YLL016W GLG1P36143 616 aa2.45□□□□□ -2.02
SDC25YLL016W MNN9P39107 395 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W ELO1P39540 310 aa2.45□□□□□ -2.02
SDC25YLL016W UIP3P39547 235 aa2.45□□□□□ -2.02
SDC25YLL016W VPS73P53142 486 aaKnown RBP2.45□□□□□ -2.02
SDC25YLL016W COG2P53271 262 aa2.45□□□□□ -2.02
SDC25YLL016W CSI1Q04368 295 aa2.45□□□□□ -2.02
SDC25YLL016W YDL242WQ07746 117 aa2.45□□□□□ -2.02
SDC25YLL016W CRT10Q08226 957 aa2.45□□□□□ -2.02
SDC25YLL016W IRC13Q08630 104 aa2.45□□□□□ -2.02
SDC25YLL016W VAM3Q12241 283 aa2.45□□□□□ -2.02
SDC25YLL016W DFG16Q99234 619 aa2.45□□□□□ -2.02
SDC25YLL016W PMR1P13586 950 aa2.44□□□□□ -2.02
SDC25YLL016W YSP3P25036 478 aa2.44□□□□□ -2.02
SDC25YLL016W PUP3P25451 205 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W RAD14P28519 371 aa2.44□□□□□ -2.02
SDC25YLL016W ECM10P39987 644 aa2.44□□□□□ -2.02
SDC25YLL016W ECM27P47144 725 aa2.44□□□□□ -2.02
SDC25YLL016W MSY1P48527 492 aa2.44□□□□□ -2.02
SDC25YLL016W SPT20P50875 604 aa2.44□□□□□ -2.02
SDC25YLL016W YGL114WP53134 725 aa2.44□□□□□ -2.02
SDC25YLL016W UFO1Q04511 668 aa2.44□□□□□ -2.02
SDC25YLL016W YLR122CQ12312 125 aa2.44□□□□□ -2.02
SDC25YLL016W CDC37P06101 506 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W UNG1P12887 359 aa2.44□□□□□ -2.02
SDC25YLL016W MSS116P15424 664 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W AMD2P22580 549 aa2.44□□□□□ -2.02
SDC25YLL016W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SDC25YLL016W DBP8P38719 431 aa2.44□□□□□ -2.02
SDC25YLL016W TOM71P38825 639 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W MLH1P38920 769 aa2.44□□□□□ -2.02
SDC25YLL016W LAS21P40367 830 aa2.44□□□□□ -2.02
SDC25YLL016W UBC11P52492 156 aa2.44□□□□□ -2.02
SDC25YLL016W ROG1P53118 685 aa2.44□□□□□ -2.02
SDC25YLL016W PNC1P53184 216 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W YGR151CP53287 111 aa2.44□□□□□ -2.02
SDC25YLL016W HEF3P53978 1044 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W COQ9Q05779 260 aa2.44□□□□□ -2.02
SDC25YLL016W YLR224WQ05947 369 aa2.44□□□□□ -2.02
SDC25YLL016W GSH2Q08220 491 aa2.44□□□□□ -2.02
SDC25YLL016W SUT2Q12286 268 aa2.44□□□□□ -2.02
SDC25YLL016W CAR1P00812 333 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W CUP1-1P0CX80 61 aa2.44□□□□□ -2.02
SDC25YLL016W CUP1-2P0CX81 61 aa2.44□□□□□ -2.02
SDC25YLL016W HIR2P32480 875 aa2.44□□□□□ -2.02
SDC25YLL016W COY1P34237 679 aa2.44□□□□□ -2.02
SDC25YLL016W RPL32P38061 130 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W KAP104P38217 918 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W MSG5P38590 489 aa2.44□□□□□ -2.02
SDC25YLL016W KSP1P38691 1029 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W DED81P38707 554 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W TCD1P38756 429 aa2.44□□□□□ -2.02
SDC25YLL016W CIN4P39110 191 aa2.44□□□□□ -2.02
SDC25YLL016W ATC1Q04005 294 aa2.44□□□□□ -2.02
SDC25YLL016W VPS20Q04272 221 aa2.44□□□□□ -2.02
SDC25YLL016W EMI2Q04409 500 aaKnown RBP2.44□□□□□ -2.02
SDC25YLL016W MSC3Q05812 728 aa2.44□□□□□ -2.02
SDC25YLL016W ARO10Q06408 635 aa2.44□□□□□ -2.02
SDC25YLL016W MLH3Q12083 715 aa2.44□□□□□ -2.02
SDC25YLL016W ECM29P38737 1868 aa2.43□□□□□ -2.02
SDC25YLL016W PMI40P29952 429 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W GDA1P32621 518 aa2.43□□□□□ -2.02
SDC25YLL016W DEF1P35732 738 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W PTK1P36002 662 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W CAB3P36076 571 aa2.43□□□□□ -2.02
SDC25YLL016W PIM1P36775 1133 aa2.43□□□□□ -2.02
SDC25YLL016W ADE17P38009 592 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W YBR053CP38235 358 aa2.43□□□□□ -2.02
SDC25YLL016W MCX1P38323 520 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W VHC1P38329 1120 aa2.43□□□□□ -2.02
SDC25YLL016W LIN1P38852 340 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W RIX1P38883 763 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W MPS2P53159 387 aa2.43□□□□□ -2.02
SDC25YLL016W COQ6P53318 479 aa2.43□□□□□ -2.02
SDC25YLL016W SMA2Q04658 369 aa2.43□□□□□ -2.02
SDC25YLL016W ATG38Q05789 226 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W YDL057WQ07379 328 aa2.43□□□□□ -2.02
SDC25YLL016W CLP1Q08685 445 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W RKI1Q12189 258 aa2.43□□□□□ -2.02
SDC25YLL016W DUR1,2P32528 1835 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W LEU4P06208 619 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W SNT1P25357 1226 aa2.43□□□□□ -2.02
SDC25YLL016W BEM1P29366 551 aa2.43□□□□□ -2.02
SDC25YLL016W MRPL9P31334 269 aa2.43□□□□□ -2.02
SDC25YLL016W DPH5P32469 300 aaPredicted RBP2.43□□□□□ -2.02
SDC25YLL016W NUP133P36161 1157 aa2.43□□□□□ -2.02
SDC25YLL016W PIH1P38768 344 aa2.43□□□□□ -2.02
SDC25YLL016W PEX18P38855 283 aa2.43□□□□□ -2.02
SDC25YLL016W SAP1P39955 897 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W AIM10P39965 576 aaKnown RBP2.43□□□□□ -2.02
SDC25YLL016W VHS2P40463 436 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms